Guide to the Human Genome
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Name: ZNF236 Sequence: fasta or formatted (1845aa) NCBI GI: 138175817
Description:

zinc finger protein 236

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6        121           3
 C cysteine            3.9         72           2
 D aspartate           3.4         63           2
 E glutamate           6.3        117           5
 F phenylalanine       3.7         68           2
 G glycine             6.0        111           2
 H histidine           5.4        100           2
 I isoleucine          3.4         62           1
 K lysine              6.7        124           3
 L leucine             7.8        144           2
 M methionine          2.0         37           1
 N asparagine          3.5         64           3
 P proline             5.7        105           2
 Q glutamine           7.6        141           2
 R arginine            4.2         77           2
 S serine              9.8        181           3
 T threonine           7.4        136           2
 V valine              5.0         92           2
 W tryptophan          0.2          3           1
 Y tyrosine            1.5         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 236 
ZNF91                 0.089   zinc finger protein 91 
ZNF107                0.072   zinc finger protein 107 
ZNF107                0.072   zinc finger protein 107 
ZNF160                0.071   zinc finger protein 160 
ZNF160                0.071   zinc finger protein 160 
ZNF160                0.071   zinc finger protein 160 
LOC100287429          0.064   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.064   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.064   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.064   zinc finger protein 84 
ZNF84                 0.064   zinc finger protein 84 
ZNF43                 0.063   zinc finger protein 43 
ZNF184                0.061   zinc finger protein 184 
ZNF700                0.060   zinc finger protein 700 
ZNF569                0.059   zinc finger protein 569 
ZNF595                0.058   zinc finger protein 595 
ZNF28                 0.056   zinc finger protein 28 
ZNF629                0.054   zinc finger protein 629 
ZNF226                0.054   zinc finger protein 226 isoform a 
ZNF226                0.054   zinc finger protein 226 isoform a 
ZNF227                0.053   zinc finger protein 227 
ZFP112                0.052   zinc finger protein 228 isoform 1 
ZFP112                0.052   zinc finger protein 228 isoform 2 
ZNF778                0.052   zinc finger protein 778 
ZNF429                0.051   zinc finger protein 429 
ZNF572                0.050   zinc finger protein 572 
ZSCAN20               0.050   zinc finger protein 31 
ZFP90                 0.049   zinc finger protein 90 
ZNF85                 0.049   zinc finger protein 85 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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