| Name: SMPD4 | Sequence: fasta or formatted (866aa) | NCBI GI: 102467481 | |
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Description: sphingomyelin phosphodiesterase 4 isoform 2
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Referenced in: Sphingomyelin, Ceramides, and Glycolipids
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Other entries for this name:
alt prot [837aa] sphingomyelin phosphodiesterase 4 isoform 1 | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.7 67 2 C cysteine 1.5 13 1 D aspartate 3.3 29 2 E glutamate 5.2 45 2 F phenylalanine 6.0 52 3 G glycine 5.0 43 2 H histidine 3.7 32 2 I isoleucine 3.2 28 2 K lysine 4.0 35 2 L leucine 13.9 120 3 M methionine 2.0 17 2 N asparagine 2.0 17 1 P proline 7.7 67 3 Q glutamine 5.3 46 2 R arginine 5.2 45 2 S serine 8.5 74 3 T threonine 4.8 42 2 V valine 5.7 49 2 W tryptophan 1.6 14 1 Y tyrosine 3.6 31 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 sphingomyelin phosphodiesterase 4 isoform 2 SMPD4 0.959 sphingomyelin phosphodiesterase 4 isoform 1 KIAA1731 0.008 hypothetical protein LOC85459 BAT2L 0.005 HLA-B associated transcript 2-like EIF2B4 0.004 eukaryotic translation initiation factor 2B, subunit... EIF2B4 0.004 eukaryotic translation initiation factor 2B, subunit... EIF2B4 0.004 eukaryotic translation initiation factor 2B, subuni... SNX26 0.004 sorting nexin 26 WIPF2 0.004 WIRE protein CEP110 0.004 centrosomal protein 110kDa HSPA1B 0.004 heat shock 70kDa protein 1B ERC1 0.004 RAB6-interacting protein 2 isoform epsilon ERC1 0.004 RAB6-interacting protein 2 isoform delta HSPA1A 0.004 heat shock 70kDa protein 1A LOC100291627 0.004 PREDICTED: hypothetical protein XP_002345251 LOC100289867 0.004 PREDICTED: hypothetical protein XP_002348034 WASF2 0.004 WAS protein family, member 2 DDX11 0.004 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX11 0.004 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX11 0.004 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DIAPH1 0.004 diaphanous 1 isoform 2 DIAPH1 0.004 diaphanous 1 isoform 1 LRFN2 0.004 leucine rich repeat and fibronectin type III domain ... ZC3H4 0.004 zinc finger CCCH-type containing 4 YTHDC2 0.004 YTH domain containing 2 C2orf53 0.004 hypothetical protein LOC339779 FAM59A 0.003 hypothetical protein LOC64762 OSCAR 0.003 osteoclast-associated receptor isoform 1 TSC22D1 0.003 TSC22 domain family, member 1 isoform 1 CBLB 0.003 Cas-Br-M (murine) ecotropic retroviral transforming ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
