SMPD4 86

Name: SMPD4	Sequence: fasta or formatted (837aa)		NCBI GI: 102467484
Description: sphingomyelin phosphodiesterase 4 isoform 1		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Other entries for this name: alt prot [866aa] sphingomyelin phosphodiesterase 4 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 63 2 C cysteine 1.6 13 1 D aspartate 3.5 29 2 E glutamate 5.3 44 2 F phenylalanine 6.2 52 3 G glycine 5.1 43 2 H histidine 3.6 30 2 I isoleucine 3.3 28 2 K lysine 4.2 35 2 L leucine 13.6 114 3 M methionine 2.0 17 2 N asparagine 2.0 17 1 P proline 7.8 65 3 Q glutamine 5.1 43 2 R arginine 5.3 44 2 S serine 8.2 69 3 T threonine 5.0 42 2 V valine 5.6 47 2 W tryptophan 1.7 14 1 Y tyrosine 3.3 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sphingomyelin phosphodiesterase 4 isoform 1 SMPD4 0.990 sphingomyelin phosphodiesterase 4 isoform 2 BAT2L 0.005 HLA-B associated transcript 2-like MTFR1 0.005 mitochondrial fission regulator 1 isoform 3 YTHDC2 0.005 YTH domain containing 2 SNX26 0.004 sorting nexin 26 WIPF2 0.004 WIRE protein HSPA1B 0.004 heat shock 70kDa protein 1B ERC1 0.004 RAB6-interacting protein 2 isoform epsilon ERC1 0.004 RAB6-interacting protein 2 isoform delta HSPA1A 0.004 heat shock 70kDa protein 1A LOC100291627 0.004 PREDICTED: hypothetical protein XP_002345251 LOC100289867 0.004 PREDICTED: hypothetical protein XP_002348034 WASF2 0.004 WAS protein family, member 2 DDX11 0.004 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX11 0.004 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX11 0.004 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DIAPH1 0.004 diaphanous 1 isoform 2 DIAPH1 0.004 diaphanous 1 isoform 1 LRFN2 0.004 leucine rich repeat and fibronectin type III domain ... ZC3H4 0.004 zinc finger CCCH-type containing 4 FAM59A 0.004 hypothetical protein LOC64762 OSCAR 0.004 osteoclast-associated receptor isoform 1 MAEL 0.004 maelstrom homolog MTFR1 0.004 mitochondrial fission regulator 1 isoform 1 CBLB 0.004 Cas-Br-M (murine) ecotropic retroviral transforming ... DRAP1 0.004 DR1-associated protein 1 LOC100293983 0.004 PREDICTED: similar to mucin, partial SCAF1 0.004 SR-related CTD-associated factor 1 MTFR1 0.004 mitochondrial fission regulator 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.