BACE1 12610

Name: BACE1	Sequence: fasta or formatted (457aa)		NCBI GI: 21040364
Description: beta-site APP-cleaving enzyme 1 isoform C preproprotein		Referenced in: Aspartic Proteases Additional Brain Proteins
Other entries for this name: alt prot [476aa] beta-site APP-cleaving enzyme 1 isoform B preproprotein alt prot [432aa] beta-site APP-cleaving enzyme 1 isoform D preproprotein alt prot [501aa] beta-site APP-cleaving enzyme 1 isoform A preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 28 2 C cysteine 2.4 11 1 D aspartate 5.7 26 2 E glutamate 5.5 25 2 F phenylalanine 4.4 20 2 G glycine 8.5 39 2 H histidine 2.0 9 1 I isoleucine 4.8 22 2 K lysine 3.3 15 2 L leucine 10.3 47 3 M methionine 3.1 14 1 N asparagine 2.4 11 1 P proline 5.7 26 2 Q glutamine 4.8 22 2 R arginine 5.3 24 2 S serine 6.6 30 2 T threonine 5.7 26 2 V valine 7.4 34 2 W tryptophan 2.0 9 1 Y tyrosine 4.2 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 beta-site APP-cleaving enzyme 1 isoform C preproprot... BACE1 0.977 beta-site APP-cleaving enzyme 1 isoform A preproprote... BACE1 0.929 beta-site APP-cleaving enzyme 1 isoform D preproprot... BACE1 0.927 beta-site APP-cleaving enzyme 1 isoform B preproprot... BACE2 0.393 beta-site APP-cleaving enzyme 2 isoform A preproprot... BACE2 0.306 beta-site APP-cleaving enzyme 2 isoform B preproprot... BACE2 0.285 beta-site APP-cleaving enzyme 2 isoform C preproprot... CTSE 0.055 cathepsin E isoform a preproprotein CTSD 0.053 cathepsin D preproprotein PGC 0.053 progastricsin (pepsinogen C) PGA4 0.051 pepsinogen 4, group I PGA3 0.051 pepsinogen 3, group I PGA5 0.050 pepsinogen 5, group I CTSE 0.037 cathepsin E isoform b preproprotein REN 0.036 renin preproprotein NAPSA 0.027 napsin A preproprotein RPRD2 0.013 Regulation of nuclear pre-mRNA domain containing 2 ... ZNF385A 0.012 zinc finger protein 385A isoform b NSL1 0.009 NSL1, MIND kinetochore complex component isoform 2 ... NSL1 0.009 NSL1, MIND kinetochore complex component isoform 1 ... HS3ST3A1 0.007 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3... ZNF385A 0.005 zinc finger protein 385A isoform a ZNF385A 0.005 zinc finger protein 385A isoform c C2orf3 0.005 hypothetical protein LOC6936 FAM134B 0.005 hypothetical protein LOC54463 isoform 1 ASB15 0.004 ankyrin repeat and SOCS box-containing 15 FLJ23834 0.004 hypothetical protein LOC222256 KCNJ15 0.004 potassium inwardly-rectifying channel J15 KCNJ15 0.004 potassium inwardly-rectifying channel J15 KCNJ15 0.004 potassium inwardly-rectifying channel J15 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.