| Name: PGA5 | Sequence: fasta or formatted (388aa) | NCBI GI: 23943854 | |
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Description: pepsinogen 5, group I
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Referenced in: Aspartic Proteases
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.9 19 1 C cysteine 1.8 7 1 D aspartate 5.7 22 2 E glutamate 4.4 17 1 F phenylalanine 4.4 17 1 G glycine 9.3 36 2 H histidine 0.5 2 1 I isoleucine 7.0 27 1 K lysine 2.3 9 2 L leucine 8.8 34 4 M methionine 1.8 7 1 N asparagine 4.6 18 2 P proline 5.4 21 2 Q glutamine 4.1 16 1 R arginine 2.1 8 2 S serine 11.3 44 3 T threonine 7.5 29 1 V valine 7.7 30 2 W tryptophan 1.8 7 1 Y tyrosine 4.6 18 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 pepsinogen 5, group I PGA4 0.995 pepsinogen 4, group I PGA3 0.992 pepsinogen 3, group I CTSE 0.500 cathepsin E isoform a preproprotein PGC 0.474 progastricsin (pepsinogen C) CTSD 0.402 cathepsin D preproprotein NAPSA 0.344 napsin A preproprotein CTSE 0.319 cathepsin E isoform b preproprotein REN 0.310 renin preproprotein LOC649034 0.175 PREDICTED: similar to pepsinogen 3, group I BACE2 0.098 beta-site APP-cleaving enzyme 2 isoform A preproprot... BACE1 0.094 beta-site APP-cleaving enzyme 1 isoform A preproprote... BACE2 0.093 beta-site APP-cleaving enzyme 2 isoform C preproprot... BACE2 0.091 beta-site APP-cleaving enzyme 2 isoform B preproprot... BACE1 0.084 beta-site APP-cleaving enzyme 1 isoform B preproprot... BACE1 0.060 beta-site APP-cleaving enzyme 1 isoform C preproprot... BACE1 0.054 beta-site APP-cleaving enzyme 1 isoform D preproprot... SMCHD1 0.013 structural maintenance of chromosomes flexible hing... BRCA2 0.010 breast cancer 2, early onset APEH 0.009 N-acylaminoacyl-peptide hydrolase IGSF22 0.008 immunoglobulin superfamily, member 22 NUAK2 0.007 NUAK family, SNF1-like kinase, 2 LHX4 0.007 LIM homeobox protein 4 TANC2 0.007 tetratricopeptide repeat, ankyrin repeat and coiled... TRIM24 0.005 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.005 transcriptional intermediary factor 1 alpha isoform ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
