CTSD 28516

Name: CTSD	Sequence: fasta or formatted (412aa)		NCBI GI: 4503143
Description: cathepsin D preproprotein		Referenced in: Aspartic Proteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 28 2 C cysteine 2.2 9 1 D aspartate 5.1 21 1 E glutamate 4.1 17 1 F phenylalanine 3.4 14 1 G glycine 9.5 39 2 H histidine 1.5 6 2 I isoleucine 5.6 23 1 K lysine 5.6 23 1 L leucine 10.0 41 2 M methionine 2.4 10 1 N asparagine 2.7 11 2 P proline 6.3 26 3 Q glutamine 4.1 17 2 R arginine 2.9 12 2 S serine 9.0 37 2 T threonine 5.1 21 1 V valine 8.3 34 2 W tryptophan 1.0 4 1 Y tyrosine 4.6 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cathepsin D preproprotein NAPSA 0.447 napsin A preproprotein CTSE 0.419 cathepsin E isoform a preproprotein PGA4 0.380 pepsinogen 4, group I PGA3 0.380 pepsinogen 3, group I PGA5 0.379 pepsinogen 5, group I REN 0.375 renin preproprotein PGC 0.327 progastricsin (pepsinogen C) CTSE 0.235 cathepsin E isoform b preproprotein BACE2 0.097 beta-site APP-cleaving enzyme 2 isoform A preproprot... BACE2 0.097 beta-site APP-cleaving enzyme 2 isoform C preproprot... BACE1 0.094 beta-site APP-cleaving enzyme 1 isoform A preproprote... BACE2 0.088 beta-site APP-cleaving enzyme 2 isoform B preproprot... BACE1 0.077 beta-site APP-cleaving enzyme 1 isoform B preproprot... BACE1 0.061 beta-site APP-cleaving enzyme 1 isoform C preproprot... LOC649034 0.055 PREDICTED: similar to pepsinogen 3, group I BACE1 0.036 beta-site APP-cleaving enzyme 1 isoform D preproprot... TMEM30B 0.009 transmembrane protein 30B MOSPD3 0.005 motile sperm domain containing 3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.