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Search of human proteins with 22547204
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22547204 hairless protein isoform a [Homo sapiens]
(1189 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22547204 hairless protein isoform a [Homo sapiens] 2528 0.0
gi|22547207 hairless protein isoform b [Homo sapiens] 2373 0.0
gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens] 254 3e-67
gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens] 238 3e-62
gi|226442779 jumonji domain containing 1A [Homo sapiens] 228 2e-59
gi|20357522 jumonji domain containing 1A [Homo sapiens] 228 2e-59
gi|38372909 jumonji domain containing 1B [Homo sapiens] 175 3e-43
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 45 5e-04
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 43 0.002
gi|156938257 leucine rich repeat containing 16B [Homo sapiens] 43 0.002
gi|116734704 interferon regulatory factor 2 binding protein 2 is... 43 0.002
gi|148612825 Rap GTPase interactor [Homo sapiens] 42 0.003
gi|116734706 interferon regulatory factor 2 binding protein 2 is... 42 0.003
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 42 0.005
gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo ... 42 0.005
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 42 0.005
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 42 0.005
gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo s... 42 0.005
gi|31442420 shroom family member 1 [Homo sapiens] 42 0.005
gi|18079216 CASK interacting protein 1 [Homo sapiens] 41 0.008
gi|118402590 myosin XV [Homo sapiens] 41 0.008
gi|24308115 interferon regulatory factor 2 binding protein 1 [Ho... 41 0.008
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 40 0.010
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 40 0.010
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 40 0.010
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 40 0.017
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 39 0.023
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 39 0.023
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 39 0.023
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 39 0.023
>gi|22547204 hairless protein isoform a [Homo sapiens]
Length = 1189
Score = 2528 bits (6551), Expect = 0.0
Identities = 1189/1189 (100%), Positives = 1189/1189 (100%)
Query: 1 MESTPSFLKGTPTWEKTAPENGIVRQEPGSPPRDGLHHGPLCLGEPAPFWRGVLSTPDSW 60
MESTPSFLKGTPTWEKTAPENGIVRQEPGSPPRDGLHHGPLCLGEPAPFWRGVLSTPDSW
Sbjct: 1 MESTPSFLKGTPTWEKTAPENGIVRQEPGSPPRDGLHHGPLCLGEPAPFWRGVLSTPDSW 60
Query: 61 LPPGFPQGPKDMLPLVEGEGPQNGERKVNWLGSKEGLRWKEAMLTHPLAFCGPACPPRCG 120
LPPGFPQGPKDMLPLVEGEGPQNGERKVNWLGSKEGLRWKEAMLTHPLAFCGPACPPRCG
Sbjct: 61 LPPGFPQGPKDMLPLVEGEGPQNGERKVNWLGSKEGLRWKEAMLTHPLAFCGPACPPRCG 120
Query: 121 PLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERAPFWVPTCLPPYLVSGLPPEHPCDWP 180
PLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERAPFWVPTCLPPYLVSGLPPEHPCDWP
Sbjct: 121 PLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERAPFWVPTCLPPYLVSGLPPEHPCDWP 180
Query: 181 LTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRA 240
LTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRA
Sbjct: 181 LTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRA 240
Query: 241 GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDG 300
GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDG
Sbjct: 241 GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDG 300
Query: 301 NLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSE 360
NLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSE
Sbjct: 301 NLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSE 360
Query: 361 EVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQ 420
EVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQ
Sbjct: 361 EVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQ 420
Query: 421 GAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDP 480
GAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDP
Sbjct: 421 GAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDP 480
Query: 481 GLQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEE 540
GLQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEE
Sbjct: 481 GLQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEE 540
Query: 541 GPGSGPDSRLSTGLAKHLLSGLGDRLCRLLRREREALAWAQREGQGPAVTEDSPGIPRCC 600
GPGSGPDSRLSTGLAKHLLSGLGDRLCRLLRREREALAWAQREGQGPAVTEDSPGIPRCC
Sbjct: 541 GPGSGPDSRLSTGLAKHLLSGLGDRLCRLLRREREALAWAQREGQGPAVTEDSPGIPRCC 600
Query: 601 SRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEECTQEAGHAACSLM 660
SRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEECTQEAGHAACSLM
Sbjct: 601 SRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEECTQEAGHAACSLM 660
Query: 661 LTQFVSSQALAELSTAMHQVWVKFDIRGHCPCQADARVWAPGDAGQQKESTQKTPPTPQP 720
LTQFVSSQALAELSTAMHQVWVKFDIRGHCPCQADARVWAPGDAGQQKESTQKTPPTPQP
Sbjct: 661 LTQFVSSQALAELSTAMHQVWVKFDIRGHCPCQADARVWAPGDAGQQKESTQKTPPTPQP 720
Query: 721 SCNGDTHRTKSIKEETPDSAETPAEDRAGRGPLPCPSLCELLASTAVKLCLGHERIHMAF 780
SCNGDTHRTKSIKEETPDSAETPAEDRAGRGPLPCPSLCELLASTAVKLCLGHERIHMAF
Sbjct: 721 SCNGDTHRTKSIKEETPDSAETPAEDRAGRGPLPCPSLCELLASTAVKLCLGHERIHMAF 780
Query: 781 APVTPALPSDDRITNILDSIIAQVVERKIQEKALGPGLRAGPGLRKGLGLPLSPVRPRLP 840
APVTPALPSDDRITNILDSIIAQVVERKIQEKALGPGLRAGPGLRKGLGLPLSPVRPRLP
Sbjct: 781 APVTPALPSDDRITNILDSIIAQVVERKIQEKALGPGLRAGPGLRKGLGLPLSPVRPRLP 840
Query: 841 PPGALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNLWGTEALGALGGQVQA 900
PPGALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNLWGTEALGALGGQVQA
Sbjct: 841 PPGALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNLWGTEALGALGGQVQA 900
Query: 901 LSPLGPPQPSSLGSTTFWEGFSWPELRPKSDEGSVLLLHRALGDEDTSRVENLAASLPLP 960
LSPLGPPQPSSLGSTTFWEGFSWPELRPKSDEGSVLLLHRALGDEDTSRVENLAASLPLP
Sbjct: 901 LSPLGPPQPSSLGSTTFWEGFSWPELRPKSDEGSVLLLHRALGDEDTSRVENLAASLPLP 960
Query: 961 EYCALHGKLNLASYLPPGLALRPLEPQLWAAYGVSPHRGHLGTKNLCVEVADLVSILVHA 1020
EYCALHGKLNLASYLPPGLALRPLEPQLWAAYGVSPHRGHLGTKNLCVEVADLVSILVHA
Sbjct: 961 EYCALHGKLNLASYLPPGLALRPLEPQLWAAYGVSPHRGHLGTKNLCVEVADLVSILVHA 1020
Query: 1021 DTPLPAWHRAQKDFLSGLDGEGLWSPGSQVSTVWHVFRAQDAQRIRRFLQMVCPAGAGAL 1080
DTPLPAWHRAQKDFLSGLDGEGLWSPGSQVSTVWHVFRAQDAQRIRRFLQMVCPAGAGAL
Sbjct: 1021 DTPLPAWHRAQKDFLSGLDGEGLWSPGSQVSTVWHVFRAQDAQRIRRFLQMVCPAGAGAL 1080
Query: 1081 EPGAPGSCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHF 1140
EPGAPGSCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHF
Sbjct: 1081 EPGAPGSCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHF 1140
Query: 1141 LSPETSALSAQLCHQGPSLPPDCHLLYAQMDWAVFQAVKVAVGTLQEAK 1189
LSPETSALSAQLCHQGPSLPPDCHLLYAQMDWAVFQAVKVAVGTLQEAK
Sbjct: 1141 LSPETSALSAQLCHQGPSLPPDCHLLYAQMDWAVFQAVKVAVGTLQEAK 1189
>gi|22547207 hairless protein isoform b [Homo sapiens]
Length = 1134
Score = 2373 bits (6151), Expect = 0.0
Identities = 1130/1189 (95%), Positives = 1132/1189 (95%), Gaps = 55/1189 (4%)
Query: 1 MESTPSFLKGTPTWEKTAPENGIVRQEPGSPPRDGLHHGPLCLGEPAPFWRGVLSTPDSW 60
MESTPSFLKGTPTWEKTAPENGIVRQEPGSPPRDGLHHGPLCLGEPAPFWRGVLSTPDSW
Sbjct: 1 MESTPSFLKGTPTWEKTAPENGIVRQEPGSPPRDGLHHGPLCLGEPAPFWRGVLSTPDSW 60
Query: 61 LPPGFPQGPKDMLPLVEGEGPQNGERKVNWLGSKEGLRWKEAMLTHPLAFCGPACPPRCG 120
LPPGFPQGPKDMLPLVEGEGPQNGERKVNWLGSKEGLRWKEAMLTHPLAFCGPACPPRCG
Sbjct: 61 LPPGFPQGPKDMLPLVEGEGPQNGERKVNWLGSKEGLRWKEAMLTHPLAFCGPACPPRCG 120
Query: 121 PLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERAPFWVPTCLPPYLVSGLPPEHPCDWP 180
PLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERAPFWVPTCLPPYLVSGLPPEHPCDWP
Sbjct: 121 PLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERAPFWVPTCLPPYLVSGLPPEHPCDWP 180
Query: 181 LTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRA 240
LTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRA
Sbjct: 181 LTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRA 240
Query: 241 GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDG 300
GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDG
Sbjct: 241 GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDG 300
Query: 301 NLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSE 360
NLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSE
Sbjct: 301 NLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSE 360
Query: 361 EVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQ 420
EVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQ
Sbjct: 361 EVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQ 420
Query: 421 GAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDP 480
GAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDP
Sbjct: 421 GAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDP 480
Query: 481 GLQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEE 540
GLQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEE
Sbjct: 481 GLQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEE 540
Query: 541 GPGSGPDSRLSTGLAKHLLSGLGDRLCRLLRREREALAWAQREGQGPAVTEDSPGIPRCC 600
GPGSGPDSRLSTGLAKHLLSGLGDRLCRLLRREREALAWAQREGQGPAVTEDSPGIPRCC
Sbjct: 541 GPGSGPDSRLSTGLAKHLLSGLGDRLCRLLRREREALAWAQREGQGPAVTEDSPGIPRCC 600
Query: 601 SRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEECTQEAGHAACSLM 660
SRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEECTQEAGHAACSLM
Sbjct: 601 SRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEECTQEAGHAACSLM 660
Query: 661 LTQFVSSQALAELSTAMHQVWVKFDIRGHCPCQADARVWAPGDAGQQKESTQKTPPTPQP 720
LTQFVSSQALAELSTAMHQVWVKFDIRGHCPCQADARVWAPGDAGQQKESTQKTPPTPQP
Sbjct: 661 LTQFVSSQALAELSTAMHQVWVKFDIRGHCPCQADARVWAPGDAGQQKESTQKTPPTPQP 720
Query: 721 SCNGDTHRTKSIKEETPDSAETPAEDRAGRGPLPCPSLCELLASTAVKLCLGHERIHMAF 780
SCNGDTHRTKSIKEETPDSAETPAEDRAGRGPLPCPSLCELLASTAVKLCLGHERIHMAF
Sbjct: 721 SCNGDTHRTKSIKEETPDSAETPAEDRAGRGPLPCPSLCELLASTAVKLCLGHERIHMAF 780
Query: 781 APVTPALPSDDRITNILDSIIAQVVERKIQEKALGPGLRAGPGLRKGLGLPLSPVRPRLP 840
APVTPALPSDDRITNILDSIIAQVVERKIQEKALGPGLRAGPGLRKGLGLPLSPVRPRLP
Sbjct: 781 APVTPALPSDDRITNILDSIIAQVVERKIQEKALGPGLRAGPGLRKGLGLPLSPVRPRLP 840
Query: 841 PPGALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNLWGTEALGALGGQVQA 900
PPGALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNLWGTEALGALGGQVQA
Sbjct: 841 PPGALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNLWGTEALGALGGQVQA 900
Query: 901 LSPLGPPQPSSLGSTTFWEGFSWPELRPKSDEGSVLLLHRALGDEDTSRVENLAASLPLP 960
LSPLGPPQPSSLGSTTFWEGFSWPELRPKSDEGSVLLLHRALGDEDTSRVENLAASLPLP
Sbjct: 901 LSPLGPPQPSSLGSTTFWEGFSWPELRPKSDEGSVLLLHRALGDEDTSRVENLAASLPLP 960
Query: 961 EYCALHGKLNLASYLPPGLALRPLEPQLWAAYGVSPHRGHLGTKNLCVEVADLVSILVHA 1020
EYCALHGKLNLASYLPPGLALRPLEPQLWAAYGVSPHRGHLGTKNLCVEVADLVSILVHA
Sbjct: 961 EYCALHGKLNLASYLPPGLALRPLEPQLWAAYGVSPHRGHLGTKNLCVEVADLVSILVHA 1020
Query: 1021 DTPLPAWHRAQKDFLSGLDGEGLWSPGSQVSTVWHVFRAQDAQRIRRFLQMVCPAGAGAL 1080
DTPLPAWHRAQKDFLSGLDGEGLWSPGSQVSTVWHVFRAQDAQR
Sbjct: 1021 DTPLPAWHRAQKDFLSGLDGEGLWSPGSQVSTVWHVFRAQDAQR---------------- 1064
Query: 1081 EPGAPGSCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHF 1140
+RR L+ VQGLVSTVSVTQHF
Sbjct: 1065 -------------IRRFLQ--------------------------MVQGLVSTVSVTQHF 1085
Query: 1141 LSPETSALSAQLCHQGPSLPPDCHLLYAQMDWAVFQAVKVAVGTLQEAK 1189
LSPETSALSAQLCHQGPSLPPDCHLLYAQMDWAVFQAVKVAVGTLQEAK
Sbjct: 1086 LSPETSALSAQLCHQGPSLPPDCHLLYAQMDWAVFQAVKVAVGTLQEAK 1134
>gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]
Length = 2303
Score = 254 bits (649), Expect = 3e-67
Identities = 225/764 (29%), Positives = 336/764 (43%), Gaps = 113/764 (14%)
Query: 482 LQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEEG 541
LQD C + L +C+ C + G HS R L ++
Sbjct: 1497 LQDDSCCEIGPNLQKCRECRLIRSKKGEEPAHSPVFCRFYYFRRLSFSKNGVVRIDGFSS 1556
Query: 542 PGSGPDSRLSTGL-------------AKHLLSGLGDRLCRLLRREREALAWAQREGQGPA 588
P D +S +K++L +GD+ C+L+ E+ AL+W +++ + A
Sbjct: 1557 PDQYDDEAMSLWTHENFEDDELDIETSKYILDIIGDKFCQLVTSEKTALSWVKKDAK-IA 1615
Query: 589 VTEDSPGIPRCCSRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEEC 648
G+ C C LFN HW C +C +C+ C + +R+K + +C
Sbjct: 1616 WKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWM---KC 1672
Query: 649 TQEAGHAACSLMLTQFVSSQALAELSTAMHQVWVKFDIRGHCPCQADARVWA---PGDAG 705
+ H LM TQ + L +L AMH + K+ I+ HC C + P G
Sbjct: 1673 VKGQPHDHKHLMPTQIIPGSVLTDLLDAMHTLREKYGIKSHCHCTNKQNLQVGNFPTMNG 1732
Query: 706 QQKESTQKTPP--------TPQPSCNGDTHRT----------------KSIKEETPDSAE 741
+ Q TPP +P+ D T + +EE ++ E
Sbjct: 1733 VSQSQQQNTPPKSEKNGGSSPESDVGTDNKLTPPESQSPLHWLADLAEQKAREEKKENKE 1792
Query: 742 TPAEDRA-------------GR-GPLPCPS------LCELLASTAVKLCLGHERIHMAFA 781
E++ GR PL + L +LL +TA KL +G +AFA
Sbjct: 1793 LTLENQIKEEREQDNSESPNGRTSPLVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFA 1852
Query: 782 PV----TPALPSDDRITNILDSIIAQVVERKIQEKALG-----PGLRAGP---------- 822
PV P+ S + NILD IIA VVE KI P L+ P
Sbjct: 1853 PVYSMGAPSSKSGRTMPNILDDIIASVVENKIPPSKTSKINVKPELKEEPEESIISAVDE 1912
Query: 823 GLRKGLGLPLSPVRPRLPPPGALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQ 882
+ +P S + + +LWL++ + + LF+E W+QGQP +VSG+ + +
Sbjct: 1913 NNKLYSDIPHSWICEK-----HILWLKDYKNSSN--WKLFKECWKQGQPAVVSGVHKKMN 1965
Query: 883 GNLWGTEALGALGGQVQA-LSPLGPPQPSSLGSTTFWEGFSWPELRPKSDEGS--VLLLH 939
+LW E++ G QA L S+ FW+GF R K+ G VL L
Sbjct: 1966 ISLWKAESISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLK 2025
Query: 940 RALGDED-----TSRVENLAASLPLPEYCALHGKLNLASYLPPGLALRP-LEPQLWAAYG 993
ED +R E+L SLPLPEYC GK NLAS+LP G +RP L P+L +AYG
Sbjct: 2026 DWPSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFNLASHLP-GFFVRPDLGPRLCSAYG 2084
Query: 994 VSPHRGH-LGTKNLCVEVADLVSILVHADTPLPAWHRAQKDFLSGLDGEGL-------WS 1045
V + H +GT NL +EV+D+V+ILV+ ++ L + E L
Sbjct: 2085 VVAAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLK 2144
Query: 1046 PGSQV-STVWHVFRAQDAQRIRRFLQMVCPA-GAGAL---EPGAPGSCYLDAGLRRRLRE 1100
S++ +WH++ +D +IR FLQ + G L +P S Y++ LR+RL E
Sbjct: 2145 DSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLE 2204
Query: 1101 EWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPE 1144
E+GV TL+Q G+A+++PAGA HQVQ S + VT+ F+SPE
Sbjct: 2205 EYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPE 2248
Score = 38.9 bits (89), Expect = 0.029
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 359 SEEVNKASGPRACPPSHHTKLKKTWLTRHSEQ 390
+ V + P++HTKLKK WLTRHSE+
Sbjct: 1311 ANSVGNGQASQTSQPNYHTKLKKAWLTRHSEE 1342
>gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]
Length = 2540
Score = 238 bits (606), Expect = 3e-62
Identities = 227/783 (28%), Positives = 341/783 (43%), Gaps = 133/783 (16%)
Query: 482 LQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEEG 541
LQD C + L +C+ C + G HS R L ++
Sbjct: 1716 LQDDSCCEIGPNLQKCRECRLIRSKKGEEPAHSPVFCRFYYFRRLSFSKNGVVRIDGFSS 1775
Query: 542 PGSGPDSRLSTGL-------------AKHLLSGLGDRLCRLLRREREALAWAQREGQGPA 588
P D +S +K++L +GD+ C+L+ E+ AL+W +++ + A
Sbjct: 1776 PDQYDDEAMSLWTHENFEDDELDIETSKYILDIIGDKFCQLVTSEKTALSWVKKDAK-IA 1834
Query: 589 VTEDSPGIPRCCSRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEEC 648
G+ C C LFN HW C +C +C+ C + +R+K + +C
Sbjct: 1835 WKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWM---KC 1891
Query: 649 TQEAGHAACSLMLTQFVSSQALAELSTAMHQVWVKFDIRG--HCPCQADARVWA-PGDAG 705
+ H LM TQ + L +L AMH + K+ I+ HC + + +V P G
Sbjct: 1892 VKGQPHDHKHLMPTQIIPGSVLTDLLDAMHTLREKYGIKSHCHCTNKQNLQVGNFPTMNG 1951
Query: 706 QQK-----------------ESTQKTPPTPQPSCNGDTHRTKSIKEE---TPDSAETP-- 743
+ ES Q+ P P+ NG + + + TP +++P
Sbjct: 1952 VSQVLQNVLNHSNKISLCMPESQQQNTP-PKSEKNGGSSPESDVGTDNKLTPPESQSPLH 2010
Query: 744 -----AEDRA-----------------------------GR-GPLPCPS------LCELL 762
AE +A GR PL + L +LL
Sbjct: 2011 WLADLAEQKAREEKKENKELTLENQIKEEREQDNSESPNGRTSPLVSQNNEQGSTLRDLL 2070
Query: 763 ASTAVKLCLGHERIHMAFAPV----TPALPSDDRITNILDSIIAQVVERKIQEKALG--- 815
+TA KL +G +AFAPV P+ S + NILD IIA VVE KI
Sbjct: 2071 TTTAGKLRVGSTDAGIAFAPVYSMGAPSSKSGRTMPNILDDIIASVVENKIPPSKTSKIN 2130
Query: 816 --PGLRAGP----------GLRKGLGLPLSPVRPRLPPPGALLWLQEPQPCPRRGFHLFQ 863
P L+ P + +P S + + +LWL++ + + LF+
Sbjct: 2131 VKPELKEEPEESIISAVDENNKLYSDIPHSWICEK-----HILWLKDYKNSSN--WKLFK 2183
Query: 864 EHWRQGQPVLVSGIQRTLQGNLWGTEALGALGGQVQA-LSPLGPPQPSSLGSTTFWEGFS 922
E W+QGQP +VSG+ + + +LW E++ G QA L S+ FW+GF
Sbjct: 2184 ECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQADLLNCKDSIISNANVKEFWDGFE 2243
Query: 923 WPELRPKSDEGS--VLLLHRALGDED-----TSRVENLAASLPLPEYCALHGKLNLASYL 975
R K+ G VL L ED +R E+L SLPLPEYC GK NLAS+L
Sbjct: 2244 EVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFNLASHL 2303
Query: 976 PPGLALRP-LEPQLWAAYGVSPHRGH-LGTKNLCVEVADLVSILVHADTPLPAWHRAQKD 1033
P G +RP L P+L +AYGV + H +GT NL +EV+D+V+ILV+ ++
Sbjct: 2304 P-GFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAG 2362
Query: 1034 FLSGLDGEGL-------WSPGSQV-STVWHVFRAQDAQRIRRFLQMVCPA-GAGAL---E 1081
L + E L S++ +WH++ +D +IR FLQ + G L +
Sbjct: 2363 ILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHD 2422
Query: 1082 PGAPGSCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFL 1141
P S Y++ LR+RL EE+GV TL+Q G+A+++PAGA HQVQ S + VT+ F+
Sbjct: 2423 PIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFV 2482
Query: 1142 SPE 1144
SPE
Sbjct: 2483 SPE 2485
Score = 38.9 bits (89), Expect = 0.029
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 359 SEEVNKASGPRACPPSHHTKLKKTWLTRHSEQ 390
+ V + P++HTKLKK WLTRHSE+
Sbjct: 1530 ANSVGNGQASQTSQPNYHTKLKKAWLTRHSEE 1561
>gi|226442779 jumonji domain containing 1A [Homo sapiens]
Length = 1321
Score = 228 bits (582), Expect = 2e-59
Identities = 204/763 (26%), Positives = 332/763 (43%), Gaps = 100/763 (13%)
Query: 467 QKGPQDGQASLQDPGLQDIPCLALPAKLAQCQSCA-------QAAGEGGGHACHSQQVRR 519
+K Q G+A +QD C+ + A+L +C+ C + + C RR
Sbjct: 521 KKLQQSGEAFVQDDS-----CVNIVAQLPKCRECRLDSLRKDKEQQKDSPVFCRFFHFRR 575
Query: 520 SPLG--GELQQEEDTATNSSSEEGPGSG-PDSRLSTGL----AKHLLSGLGDRLCRLLRR 572
G L+ E N E G P ++ G+ AK++L+ +GD C+++
Sbjct: 576 LQFNKHGVLRVEGFLTPNKYDNEAIGLWLPLTKNVVGIDLDTAKYILANIGDHFCQMVIS 635
Query: 573 EREALAWAQREGQGPAVTEDSPGIPRCCSRCHHGLFNTHWRCPRCSHRLCVACGRVAGTG 632
E+EA++ + Q A G+ C C +FN HW CPRC +CV C R+
Sbjct: 636 EKEAMSTIEPHRQ-VAWKRAVKGVREMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKN 694
Query: 633 RAREKAGFQEQSAEECTQEAGHAACSLMLTQFVSSQALAELSTAMHQVWVKFDIRGHCPC 692
++ A ++ S +C + H +LM TQ + +AL ++ +H V K+ I+ +CPC
Sbjct: 695 -CQQGAAYKTFSWLKCVKSQIHEPENLMPTQIIPGKALYDVGDIVHSVRAKWGIKANCPC 753
Query: 693 QADARVWAPGDAGQQKESTQKTPPTPQPSCNGDTHRTKSIKEETPDSAETPAEDRAGRGP 752
++ + +++ Q + +P+ + S+ E E ++ P
Sbjct: 754 -SNRQFKLFSKPASKEDLKQTSLAGEKPTLGAVLQQNPSVLEPAAVGGEAASKPAGSMKP 812
Query: 753 LPCPS-------LCELLASTAVKLCLGHE------RIHMAFAPVTPALPSDDRITNILDS 799
CP+ L +L + K + + + P P L + + +S
Sbjct: 813 A-CPASTSPLNWLADLTSGNVNKENKEKQPTMPILKNEIKCLPPLPPLSKSSTVLHTFNS 871
Query: 800 IIAQVVE-------RKIQEKALGP---GLRAGPGL------------------RKGLGLP 831
I V R + + G GL+ P + ++ GL
Sbjct: 872 TILTPVSNNNSGFLRNLLNSSTGKTENGLKNTPKILDDIFASLVQNKTTSDLSKRPQGLT 931
Query: 832 LSPVRPRLPPP------GALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNL 885
+ P P LL LQ+P + +++F+E W+QGQPV+VSG+ L L
Sbjct: 932 IKPSILGFDTPHYWLCDNRLLCLQDPNN--KSNWNVFRECWKQGQPVMVSGVHHKLNSEL 989
Query: 886 WGTEALGALGGQVQALSPLGPPQPSSLGSTT--FWEGFSWPELRPKSD-EGSVLLLHRAL 942
W E+ G+ + G+T FW+GF R K++ E VL L
Sbjct: 990 WKPESFRKEFGEQEVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWP 1049
Query: 943 GDED-----TSRVENLAASLPLPEYCALHGKLNLASYLPPGLALRPLEPQLWAAYG-VSP 996
ED SR ++L A++PLPEY GKLNLAS LP L P+++ AYG ++P
Sbjct: 1050 PGEDFRDMMPSRFDDLMANIPLPEYTRRDGKLNLASRLPNYFVRPDLGPKMYNAYGLITP 1109
Query: 997 HRGHLGTKNLCVEVADLVSILVHADTPLPAWHRAQKDFLSGLDG-----------EGLWS 1045
GT NL ++V+D +++V+ P + ++ + DG EG
Sbjct: 1110 EDRKYGTTNLHLDVSDAANVMVYVGIPKGQCEQEEEVLKTIQDGDSDELTIKRFIEGKEK 1169
Query: 1046 PGSQVSTVWHVFRAQDAQRIRRFLQMVCPA----GAGALEPGAPGSCYLDAGLRRRLREE 1101
PG+ +WH++ A+D ++IR FL+ V +P S YLD LR+RL +E
Sbjct: 1170 PGA----LWHIYAAKDTEKIREFLKKVSEEQGQENPADHDPIHDQSWYLDRSLRKRLHQE 1225
Query: 1102 WGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPE 1144
+GV W ++Q G+ V +PAGAPHQV L S + V + F+SPE
Sbjct: 1226 YGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPE 1268
>gi|20357522 jumonji domain containing 1A [Homo sapiens]
Length = 1321
Score = 228 bits (582), Expect = 2e-59
Identities = 204/763 (26%), Positives = 332/763 (43%), Gaps = 100/763 (13%)
Query: 467 QKGPQDGQASLQDPGLQDIPCLALPAKLAQCQSCA-------QAAGEGGGHACHSQQVRR 519
+K Q G+A +QD C+ + A+L +C+ C + + C RR
Sbjct: 521 KKLQQSGEAFVQDDS-----CVNIVAQLPKCRECRLDSLRKDKEQQKDSPVFCRFFHFRR 575
Query: 520 SPLG--GELQQEEDTATNSSSEEGPGSG-PDSRLSTGL----AKHLLSGLGDRLCRLLRR 572
G L+ E N E G P ++ G+ AK++L+ +GD C+++
Sbjct: 576 LQFNKHGVLRVEGFLTPNKYDNEAIGLWLPLTKNVVGIDLDTAKYILANIGDHFCQMVIS 635
Query: 573 EREALAWAQREGQGPAVTEDSPGIPRCCSRCHHGLFNTHWRCPRCSHRLCVACGRVAGTG 632
E+EA++ + Q A G+ C C +FN HW CPRC +CV C R+
Sbjct: 636 EKEAMSTIEPHRQ-VAWKRAVKGVREMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKN 694
Query: 633 RAREKAGFQEQSAEECTQEAGHAACSLMLTQFVSSQALAELSTAMHQVWVKFDIRGHCPC 692
++ A ++ S +C + H +LM TQ + +AL ++ +H V K+ I+ +CPC
Sbjct: 695 -CQQGAAYKTFSWLKCVKSQIHEPENLMPTQIIPGKALYDVGDIVHSVRAKWGIKANCPC 753
Query: 693 QADARVWAPGDAGQQKESTQKTPPTPQPSCNGDTHRTKSIKEETPDSAETPAEDRAGRGP 752
++ + +++ Q + +P+ + S+ E E ++ P
Sbjct: 754 -SNRQFKLFSKPASKEDLKQTSLAGEKPTLGAVLQQNPSVLEPAAVGGEAASKPAGSMKP 812
Query: 753 LPCPS-------LCELLASTAVKLCLGHE------RIHMAFAPVTPALPSDDRITNILDS 799
CP+ L +L + K + + + P P L + + +S
Sbjct: 813 A-CPASTSPLNWLADLTSGNVNKENKEKQPTMPILKNEIKCLPPLPPLSKSSTVLHTFNS 871
Query: 800 IIAQVVE-------RKIQEKALGP---GLRAGPGL------------------RKGLGLP 831
I V R + + G GL+ P + ++ GL
Sbjct: 872 TILTPVSNNNSGFLRNLLNSSTGKTENGLKNTPKILDDIFASLVQNKTTSDLSKRPQGLT 931
Query: 832 LSPVRPRLPPP------GALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNL 885
+ P P LL LQ+P + +++F+E W+QGQPV+VSG+ L L
Sbjct: 932 IKPSILGFDTPHYWLCDNRLLCLQDPNN--KSNWNVFRECWKQGQPVMVSGVHHKLNSEL 989
Query: 886 WGTEALGALGGQVQALSPLGPPQPSSLGSTT--FWEGFSWPELRPKSD-EGSVLLLHRAL 942
W E+ G+ + G+T FW+GF R K++ E VL L
Sbjct: 990 WKPESFRKEFGEQEVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWP 1049
Query: 943 GDED-----TSRVENLAASLPLPEYCALHGKLNLASYLPPGLALRPLEPQLWAAYG-VSP 996
ED SR ++L A++PLPEY GKLNLAS LP L P+++ AYG ++P
Sbjct: 1050 PGEDFRDMMPSRFDDLMANIPLPEYTRRDGKLNLASRLPNYFVRPDLGPKMYNAYGLITP 1109
Query: 997 HRGHLGTKNLCVEVADLVSILVHADTPLPAWHRAQKDFLSGLDG-----------EGLWS 1045
GT NL ++V+D +++V+ P + ++ + DG EG
Sbjct: 1110 EDRKYGTTNLHLDVSDAANVMVYVGIPKGQCEQEEEVLKTIQDGDSDELTIKRFIEGKEK 1169
Query: 1046 PGSQVSTVWHVFRAQDAQRIRRFLQMVCPA----GAGALEPGAPGSCYLDAGLRRRLREE 1101
PG+ +WH++ A+D ++IR FL+ V +P S YLD LR+RL +E
Sbjct: 1170 PGA----LWHIYAAKDTEKIREFLKKVSEEQGQENPADHDPIHDQSWYLDRSLRKRLHQE 1225
Query: 1102 WGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPE 1144
+GV W ++Q G+ V +PAGAPHQV L S + V + F+SPE
Sbjct: 1226 YGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPE 1268
>gi|38372909 jumonji domain containing 1B [Homo sapiens]
Length = 1761
Score = 175 bits (443), Expect = 3e-43
Identities = 139/440 (31%), Positives = 212/440 (48%), Gaps = 39/440 (8%)
Query: 780 FAPVTPALPSDDRITNILDSIIAQVVERKIQEKALGPGLRAGPGLR--KGLGLPLSPVRP 837
F+ + + S + N LD IIA VVE K A + K + + L+ + P
Sbjct: 1319 FSTSSAGVKSKASLPNFLDHIIASVVENKKTSDASKRACNLTDTQKEVKEMVMGLNVLDP 1378
Query: 838 RLPPP----GALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNLWGTEALGA 893
G LL L +P + + +F+E W+QGQPVLVSG+ + L+ LW EA
Sbjct: 1379 HTSHSWLCDGRLLCLHDPSN--KNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQ 1436
Query: 894 LGGQ--VQALSPLGPPQPSSLGSTTFWEGFSWPELRPKSDEGSVLLLH-------RALGD 944
G V ++ S + FW+GF R +S++G ++L D
Sbjct: 1437 EFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRD 1496
Query: 945 EDTSRVENLAASLPLPEYCALHGKLNLASYLPPGLALRPLEPQLWAAYG-VSPHRGHLGT 1003
+R E+L +LPLPEY G+LNLAS LP L P+++ AYG ++ +GT
Sbjct: 1497 MMPTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGT 1556
Query: 1004 KNLCVEVADLVSILVHADTPLPAWHRAQKDFLSGLDGE-----------GLWSPGSQVST 1052
NL ++V+D V+++V+ P+ ++ + +G+ G PG+
Sbjct: 1557 TNLHLDVSDAVNVMVYVGIPIGEGAHDEEVLKTIDEGDADEVTKQRIHDGKEKPGA---- 1612
Query: 1053 VWHVFRAQDAQRIRRFLQMVCPAGAGALEPGAPG----SCYLDAGLRRRLREEWGVSCWT 1108
+WH++ A+DA++IR L+ V P S YLD LR+RL EE+GV W
Sbjct: 1613 LWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYEEYGVQGWA 1672
Query: 1109 LLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETSALSAQLCHQGPSL--PPDCHLL 1166
++Q G+AV +PAGAPHQV L S + V + F+SPE +L + L H
Sbjct: 1673 IVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHED 1732
Query: 1167 YAQMDWAVFQAVKVAVGTLQ 1186
Q+ ++ AVK AVGTL+
Sbjct: 1733 KLQVKNIIYHAVKDAVGTLK 1752
Score = 85.9 bits (211), Expect = 2e-16
Identities = 83/330 (25%), Positives = 134/330 (40%), Gaps = 45/330 (13%)
Query: 384 LTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGA 443
L+ EQ + G + E + +L G + +G K+ P P TA
Sbjct: 821 LSDSEEQLQAKTGLKGIPEHLMGKLGP---NGERSAELLLGKSKGKQAPKGRPRTAPLKV 877
Query: 444 GGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDPGLQDIPCLALPAKLAQCQSCA-- 501
G Q V KDV + +Q G +P LQD C+ + L +C+ C
Sbjct: 878 G--QSVL------KDVSKVKKLKQSG---------EPFLQDGSCINVAPHLHKCRECRLE 920
Query: 502 ------QAAGEGGGHACHSQQVRRSPLG--GELQQEEDTATNSSSEEGPGSG-PDSRLST 552
+ + AC RR G L+ E + S + P S L+
Sbjct: 921 RYRKFKEQEQDDSTVACRFFHFRRLIFTRKGVLRVEGFLSPQQSDPDAMNLWIPSSSLAE 980
Query: 553 GL----AKHLLSGLGDRLCRLLRREREALAWAQREGQGPAVTEDSPGIPRCCSRCHHGLF 608
G+ +K++L+ +GD+ C+L+ E+EA+ + Q A G+ C C LF
Sbjct: 981 GIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPH-QKVAWKRAVRGVREMCDVCETTLF 1039
Query: 609 NTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEE------CTQEAGHAACSLMLT 662
N HW C +C +C+ C R+ ++R ++ +E EE C + H +LM T
Sbjct: 1040 NIHWVCRKCGFGVCLDCYRLR---KSRPRSETEEMGDEEVFSWLKCAKGQSHEPENLMPT 1096
Query: 663 QFVSSQALAELSTAMHQVWVKFDIRGHCPC 692
Q + AL + +H K+ I+ +CPC
Sbjct: 1097 QIIPGTALYNIGDMVHAARGKWGIKANCPC 1126
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 44.7 bits (104), Expect = 5e-04
Identities = 70/235 (29%), Positives = 84/235 (35%), Gaps = 54/235 (22%)
Query: 275 PWTSWPACPPGLVHTLGNVWAGPGD-GNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPT 333
P + P PPG T G+ PG G+ GYQ GPP P P S PP
Sbjct: 173 PGPAGPPGPPGPPGTSGH----PGSPGSPGYQ-GPPGEPGQAGP-----------SGPPG 216
Query: 334 KGGGLGPCGKCQEGLEGGASGASEPSEE----VNKASGPRACPPSHHTKLKKTWLTRHSE 389
G +GP G + E G G P E GP P K + + R+ E
Sbjct: 217 PPGAIGPSGPAGKDGESGRPG--RPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGE 274
Query: 390 QFEC----------------------PRGCPEVEERPVARLRALKRAGSPEVQGAMGSPA 427
+ E PRG P RP A R G+ +G+ G P
Sbjct: 275 KGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGAR-GNDGARGSDGQPG 333
Query: 428 PKRPPDP--FPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDP 480
P PP FPG+ GA G EV + GQ E GPQ G A Q P
Sbjct: 334 PPGPPGTAGFPGS--PGAKG--EVGPAGSPGSNGAPGQRGE-PGPQ-GHAGAQGP 382
Score = 44.3 bits (103), Expect = 7e-04
Identities = 145/581 (24%), Positives = 173/581 (29%), Gaps = 141/581 (24%)
Query: 12 PTWEKTAPENGIVRQEPGSPPRDGLHHGPLCLGEPA-------------PFWRGVLSTPD 58
P E+ AP R G P RDG+ GP G P P +G P
Sbjct: 505 PAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPG 564
Query: 59 SWLPPGFPQGPKDMLPLVEGEGPQ--------NGERKVNWLGSKEGLRWKEAMLTHPLAF 110
PPG P GP+ ++ GP+ NGER +G K
Sbjct: 565 ---PPG-PSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGET------ 614
Query: 111 CGPACPPRCGPLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERAPFWVPTCLPPYLVSG 170
GP PP GP P G + P P + G
Sbjct: 615 -GPQGPP--GPTGPGGDKGD--TGPPG---------------------------PQGLQG 642
Query: 171 LP----PEHPCDWPLTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSIPRLAKEPLAAAEP 226
LP P P P P G P P G KG D P P A P
Sbjct: 643 LPGTGGPPGENGKPGEPGP-KGDAGAPGAP-----GGKG----DAGAPGERGPPGLAGAP 692
Query: 227 GLFG----------LNSGGHLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQP----- 271
GL G + G G A P L GE G P G+P
Sbjct: 693 GLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKG-DKGEPGGPGA 751
Query: 272 DTVPWTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCC---- 327
D VP P P G + G PGD G G P P P +RG
Sbjct: 752 DGVPGKDGPRGPTGPIGPPGPA-GQPGDKGEG---GAPGLPGIAGPRGSPGERGETGPPG 807
Query: 328 -SSYPPTKGGGLGPCGKCQEGL-----EGGASGASEPSEEVNKASGPRACPPSHHTKLKK 381
+ +P G P GK + G EGG G + P SGP P K +
Sbjct: 808 PAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPG----GSGPAGPPGPQGVKGE- 862
Query: 382 TWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQ 441
R S G P P G+P G GSP PP P T
Sbjct: 863 ----RGSPGGPGAAGFPGARGLPGPP----GSNGNPGPPGPSGSPGKDGPPGPAGNTGAP 914
Query: 442 GAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDPGLQDIPCLALPAKLAQCQSCA 501
G+ G + D+GQ E KG PG Q P P +A
Sbjct: 915 GSPG--------VSGPKGDAGQPGE-KG---------SPGAQGPPGAPGPLGIA---GIT 953
Query: 502 QAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEEGP 542
A G G + P G + + + A S E GP
Sbjct: 954 GARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGP 994
Score = 33.5 bits (75), Expect = 1.2
Identities = 59/227 (25%), Positives = 75/227 (33%), Gaps = 37/227 (16%)
Query: 223 AAEPGLFG-LNSGGHLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPA 281
A PG+ G S G GE+ +P + GE G Q G P P
Sbjct: 959 AGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQ-------GLPGLAGTAGEPG 1011
Query: 282 CP--PGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPS-PEPPVTQRGCCSSYPPTKGGGL 338
PG G + G G+ G + G P P P P PP G +
Sbjct: 1012 RDGNPGSDGLPGRDGSPGGKGDRG-ENGSPGAPGAPGHPGPP---------------GPV 1055
Query: 339 GPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCP 398
GP GK + E G +G P+ A A P K R + + RG P
Sbjct: 1056 GPAGKSGDRGESGPAG---PAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFP 1112
Query: 399 EVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGG 445
P + G QGA+GSP P P P + G G
Sbjct: 1113 GNPGAPGS-------PGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDG 1152
Score = 32.7 bits (73), Expect = 2.1
Identities = 68/268 (25%), Positives = 86/268 (32%), Gaps = 58/268 (21%)
Query: 223 AAEPGLFGLNSG-GHLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDT--VPWTSW 279
A EPG G G GEA P + GE G+ +P G+P +P +
Sbjct: 431 AGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGE--DGKDGSP-----GEPGANGLPGAAG 483
Query: 280 PACPPGLVHTLGNVWAGP-GDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGL 338
PG + GP G + + GP P P P RG P G
Sbjct: 484 ERGAPG--------FRGPAGPNGIPGEKGPAGERGAPGPAGP---RGAAGE-PGRDGVPG 531
Query: 339 GPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCP 398
GP + G GG +P ++ R PP PRG P
Sbjct: 532 GPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSG----------------PRGQP 575
Query: 399 EVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKD 458
V P + G +G G P P+ PP T QG G T G
Sbjct: 576 GVMGFPGPKGND-GAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPG-----PTGPGGDK 629
Query: 459 VDSGQHDEQKGPQDGQASLQDPGLQDIP 486
D+G GPQ GLQ +P
Sbjct: 630 GDTG----PPGPQ---------GLQGLP 644
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 43.1 bits (100), Expect = 0.002
Identities = 58/199 (29%), Positives = 77/199 (38%), Gaps = 35/199 (17%)
Query: 151 ILERAPFWVPTCLPPYLVSGL--PPEHPCDWPLTPHPWVYSGGQPKVPSAFSLGSKGFYY 208
I + A F P L P L S PP C P P P S G +A ++ G ++
Sbjct: 859 IQQLAGFSAPAGLSPLLPSSSSSPPPGACGSPSAPTP---SAGV----AATTIAGFGHFH 911
Query: 209 KDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFL 268
K L ++ P L L G R+ +A +PS G G ++ FL
Sbjct: 912 K-----ALGGSLSSSDSPLLTPLQPGA---RSPQAAQPSPAPPGARGGLGLPEH----FL 959
Query: 269 GQPDTVPWTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCP--SPEPPVTQRGC 326
P P + P+ PG + PG+ +LG GP +TP P PEPP G
Sbjct: 960 PPP---PSSRSPSSSPG------QLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGA 1010
Query: 327 CSSYPP---TKGGGLGPCG 342
P T GGL P G
Sbjct: 1011 SGGASPVGFTPRGGLSPPG 1029
>gi|156938257 leucine rich repeat containing 16B [Homo sapiens]
Length = 1372
Score = 42.7 bits (99), Expect = 0.002
Identities = 56/228 (24%), Positives = 76/228 (33%), Gaps = 42/228 (18%)
Query: 296 GPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQE------GLE 349
GPG G L PP P PP TQ S PP+ G PC +E G
Sbjct: 1069 GPGSPTTGLLLPPP-------PPPPPTQESPPSPDPPSLGNNSSPCWSPEEESSLLPGFG 1121
Query: 350 GG---------ASGASEPSEEVNKASGPRACPPSHHTKL-----KKTWLTRHSEQFECPR 395
GG + SEP E A G P H L K W F+ R
Sbjct: 1122 GGRGPSFRRKMGTEGSEPGEG-GPAPGTAQQPRVHGVALPGLERAKGW------SFDGKR 1174
Query: 396 GCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIG 455
P ++ + +R+ G+ P P + P + W + + S
Sbjct: 1175 EGPGPDQEGSTQAWQKRRSSDDAGPGSWKPPPPPQSTKPSFSAMRRAEATW-HIAEESAP 1233
Query: 456 NKDVDSGQHDEQKGPQDGQASLQDPGLQDIPCLALPAKLAQCQSCAQA 503
N S Q G ++ + +L P LPA+ A+ Q A A
Sbjct: 1234 NHSCQSPSPASQDGEEEKEGTL-------FPERTLPARNAKLQDPALA 1274
>gi|116734704 interferon regulatory factor 2 binding protein 2
isoform A [Homo sapiens]
Length = 587
Score = 42.7 bits (99), Expect = 0.002
Identities = 59/230 (25%), Positives = 79/230 (34%), Gaps = 47/230 (20%)
Query: 403 RPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSG 462
+ VAR A KR SPE +G +G P P+ T+ +G + + +
Sbjct: 348 KAVART-ARKRKPSPEPEGEVGPPKINGEAQPWLSTSTEGLKIPMTPTSSFVSPPPPTAS 406
Query: 463 QHDEQKGPQDGQASLQDPGLQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPL 522
H + P + + Q P + L L A A GG HA
Sbjct: 407 PHSNRTTPPEAAQNGQSP----MAALILVADNA-----------GGSHASKDAN------ 445
Query: 523 GGELQQEEDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLGDRLCRLLRREREALAWAQR 582
Q T NS+S P S RL + G G A
Sbjct: 446 ----QVHSTTRRNSNSPPSPSSMNQRRLGP----REVGGQG------------AGNTGGL 485
Query: 583 EGQGPAVTEDSP---GIPRCCSRCHHGLFNTHW-RCPRC-SHRLCVACGR 627
E PA DS P CC+ CH L +TH+ +CP SH+ C C R
Sbjct: 486 EPVHPASLPDSSLATSAPLCCTLCHERLEDTHFVQCPSVPSHKFCFPCSR 535
>gi|148612825 Rap GTPase interactor [Homo sapiens]
Length = 1075
Score = 42.4 bits (98), Expect = 0.003
Identities = 41/150 (27%), Positives = 55/150 (36%), Gaps = 21/150 (14%)
Query: 236 HLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTS--WPACPPGLVHTLGNV 293
H+ G E PS A R P + T+P W PPG + G
Sbjct: 837 HVVLDGHLEAPSCPL------APRDPGPAAREVAPERTLPLRGAPWAQAPPGRQPSRGGS 890
Query: 294 WAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKC-QEGLEGGA 352
AGP + L PP+TP P P P +P + GPCGK E G
Sbjct: 891 QAGPPHTDSSCLLTPPSTPLGPEPGDP--------DWPESG----GPCGKALPERQRNGL 938
Query: 353 SGASEPSEEVNKASGPRACPPSHHTKLKKT 382
SG + E + A+ PP+ ++ T
Sbjct: 939 SGLRGAAPEGDSAALAEESPPAPSSRSSST 968
>gi|116734706 interferon regulatory factor 2 binding protein 2
isoform B [Homo sapiens]
Length = 571
Score = 42.4 bits (98), Expect = 0.003
Identities = 56/223 (25%), Positives = 75/223 (33%), Gaps = 46/223 (20%)
Query: 410 ALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKG 469
A KR SPE +G +G P P+ T+ +G + + + H +
Sbjct: 338 ARKRKPSPEPEGEVGPPKINGEAQPWLSTSTEGLKIPMTPTSSFVSPPPPTASPHSNRTT 397
Query: 470 PQDGQASLQDPGLQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQE 529
P + + Q P + L L A A GG HA Q
Sbjct: 398 PPEAAQNGQSP----MAALILVADNA-----------GGSHASKDAN----------QVH 432
Query: 530 EDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLGDRLCRLLRREREALAWAQREGQGPAV 589
T NS+S P S RL + G G A E PA
Sbjct: 433 STTRRNSNSPPSPSSMNQRRLGP----REVGGQG------------AGNTGGLEPVHPAS 476
Query: 590 TEDSP---GIPRCCSRCHHGLFNTHW-RCPRC-SHRLCVACGR 627
DS P CC+ CH L +TH+ +CP SH+ C C R
Sbjct: 477 LPDSSLATSAPLCCTLCHERLEDTHFVQCPSVPSHKFCFPCSR 519
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 41.6 bits (96), Expect = 0.005
Identities = 79/284 (27%), Positives = 97/284 (34%), Gaps = 61/284 (21%)
Query: 190 GGQPKVPSAFSLGSKGFYYKD--PSIPRLAKEPLAAAEPGLFGLNSGGHLQRAGEAERPS 247
G Q SA + G +GF D P P A P PGL G S G G+
Sbjct: 1284 GPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKG--SPGLPGPRGDPGERG 1341
Query: 248 LHQRDGEMGA-------------GRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTL--GN 292
GE GA GR+ +P P P P PPGL T G+
Sbjct: 1342 PRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGD 1401
Query: 293 VW-------AGPGDGNLGY-QLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKC 344
GPG+G + + G P P P P+ PV PP G G G
Sbjct: 1402 KGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVG--------PP---GKKGEKGDS 1450
Query: 345 QEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLKKTW---LTRHSEQFECPRGCPEVE 401
++G G P E+ GPR P + K + + L E+ E RG P
Sbjct: 1451 EDGAPGLPGQPGSPGEQ-----GPRGPPGAIGPKGDRGFPGPLGEAGEKGE--RGPPGP- 1502
Query: 402 ERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGG 445
AGS + G G P K P P T QG G
Sbjct: 1503 ------------AGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKG 1534
Score = 40.4 bits (93), Expect = 0.010
Identities = 56/215 (26%), Positives = 76/215 (35%), Gaps = 27/215 (12%)
Query: 276 WTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKG 335
+T+ P P V+ PG+ L Q+GPP P P +G S KG
Sbjct: 1238 FTTQPRPEPCPVYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGS-ATAKG 1296
Query: 336 GGLGPCGKCQEGLEGGASGASEPSEEVNKAS----GPRACPPSHHTKLKKTWLTRHSEQF 391
P + G G A P K S GPR P
Sbjct: 1297 ERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERG--------------- 1341
Query: 392 ECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRD 451
PRG P+ E P A + + G P + G G P P PP P + G G +
Sbjct: 1342 --PRG-PKGE--PGAPGQVIGGEG-PGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPG 1395
Query: 452 TSIGNKDVDSGQHDEQKGPQDGQASLQDPGLQDIP 486
T++ D G+ GP +G + +PGL +P
Sbjct: 1396 TAMKGDKGDRGERG-PPGPGEGGIAPGEPGLPGLP 1429
>gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo
sapiens]
Length = 1691
Score = 41.6 bits (96), Expect = 0.005
Identities = 80/314 (25%), Positives = 99/314 (31%), Gaps = 56/314 (17%)
Query: 162 CLPPYLVSGLPPEHPCDWPLTPHPWVYSGGQPKVPSAFSLGSKGFY-YKDPSIPRLAKEP 220
C P G P P P + S G + G +GF P P+ K P
Sbjct: 42 CFPEKGARGRPGPIGIQGPTGPQGFTGSTGLSGLK-----GERGFPGLLGPYGPKGDKGP 96
Query: 221 LAAAEPGLFGLNS-GGHLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSW 279
+ PG G+N GH + G P L +G GA + PD P
Sbjct: 97 MGV--PGFLGINGIPGHPGQPGPRGPPGLDGCNGTQGA--------VGFPGPDGYPGLLG 146
Query: 280 PACPPGLVHTLGNVWAGPG--------------DGNLGYQLGPPATPRCPSPEPPVTQRG 325
P PG + G+ PG DG G Q G P P P P +G
Sbjct: 147 PPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQ-GAPGFPGAVGPAGPPGLQG 205
Query: 326 CCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPS-------HHTK 378
PP G LGP G G +G + GP PPS K
Sbjct: 206 -----PPGPPGPLGPDGNMGLGFQGEKGVKGDVG-----LPGPAGPPPSTGELEFMGFPK 255
Query: 379 LKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGT 438
KK S+ P+G P + P L G +G G P P P
Sbjct: 256 GKK-----GSKGEPGPKGFPGISGPP--GFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSE 308
Query: 439 AEQGAGGWQEVRDT 452
QG G Q + T
Sbjct: 309 GVQGPPGQQGKKGT 322
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 41.6 bits (96), Expect = 0.005
Identities = 68/288 (23%), Positives = 101/288 (35%), Gaps = 39/288 (13%)
Query: 308 PPATPRCPSPEP-------------PVTQRGCCSSYP---PTKGGGLGPCGKCQEGLEGG 351
P TPR SPEP + GCC P +G PC E
Sbjct: 711 PKQTPRA-SPEPGYPGEPLLGLQAASAQEPGCCPGLPHLCSAQGLAPAPCLVTPSWTETA 769
Query: 352 ASGASEPSEEVNKAS------GPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPV 405
+SG P E A+ GPR PS + ++ SE+ P + + P
Sbjct: 770 SSGGDHPQAEPKLATEAEGTTGPRLPLPSVPSPSQEG-APLPSEEASAPDAPDALPDSPT 828
Query: 406 ----ARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDS 461
+ A+K A + + G+ SP + P TAE +G + + + + D
Sbjct: 829 PATGGEVSAIKLASA--LNGSSSSPEVEAPSSEDEDTAEATSGIFTDTSSDGLQARRPDV 886
Query: 462 ----GQHDEQKGPQDGQASLQDPGLQDIPCLALPAKLAQCQSCAQAAGEGGGHACHSQQV 517
+Q G D SL P + + A S Q G+ + +
Sbjct: 887 VPAFRSLQKQVGTPDSLDSLDIPSSASDGGYEVFSPSATGPSGGQPRALDSGYDTENYES 946
Query: 518 RRSPLGGELQQEEDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLGDR 565
L + E A + EG G GP++RLST LSGL ++
Sbjct: 947 PEFVLKEAQEGCEPQAFAELASEGEGPGPETRLSTS-----LSGLNEK 989
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 41.6 bits (96), Expect = 0.005
Identities = 112/422 (26%), Positives = 145/422 (34%), Gaps = 64/422 (15%)
Query: 28 PGSPPRDGLHHGPLCLGEPAPFWRGVLSTPDSWLPPGFPQG-PKDMLPLVEGEGPQNGER 86
P PPRDG P AP G LS+P L GFP P D+L + E N E
Sbjct: 451 PPPPPRDGPFPWPWPPAHSAPR-PGTLSSPFPLLD-GFPGADPDDVLTVTESSRGLNLE- 507
Query: 87 KVNWLGSKEGLRWKEAMLTHPLAFCGPACPPRCGPLMPEHSGGHLKSDPVAFRPWHCPFL 146
W++A PA P P P H + P +
Sbjct: 508 ----------CLWEKARRGAGRGGGAPAWQPASAPPAP-----HANPSNPFYEALSTPSV 552
Query: 147 LETKILERAPFWVPTCLPPYLVSGLPPE--HPCDW-PLTPHPWVYSGGQPKVPSAF-SLG 202
L I R+P G PPE P DW PL P V + P+ PS L
Sbjct: 553 LPV-ISARSPSVSSEYYIRLEEHGSPPEPLFPNDWDPLDPG--VPAPQAPQAPSEVPQLV 609
Query: 203 SKGFYYKDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGAGRQQN 262
S+ + P P P ++ G F L SG + G GE AG +
Sbjct: 610 SET--WASPLFPAPRPFPAQSSASGSF-LLSGWDPEGRGA----------GETLAG---D 653
Query: 263 PCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVT 322
P + LG+ T PW V G G LG + R P P P +
Sbjct: 654 PAEV-LGERGTAPW----------VEEEEEEEEGSSPGEDSSSLGGGPSRRGPLPCPLCS 702
Query: 323 QRGCCSSYPPTKGGGLG-----PCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHT 377
+ G CS P +G + P C E +S +E + A P A P S
Sbjct: 703 REGACSCLPLERGDAVAGWGGHPALGCPHPPE---DDSSLRAERGSLADLPMAPPASAPP 759
Query: 378 KLKKTWLTRHSEQFECPRGCPEVEERPVARLRA-LKRAGSPEVQGAMGSP-APKRPPDPF 435
+ + + Q+ RG P P RA A SP+ A+ SP + P P
Sbjct: 760 EFLDPLMGAAAPQYP-GRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPK 818
Query: 436 PG 437
PG
Sbjct: 819 PG 820
Score = 31.6 bits (70), Expect = 4.7
Identities = 39/170 (22%), Positives = 55/170 (32%), Gaps = 16/170 (9%)
Query: 309 PATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSEEVNKASGP 368
P P P P PP Q PP + P G E GA + + G
Sbjct: 1172 PQPPPPPLPPPPEAQPRRLEPAPPRARPEVAPEG------EPGAPDSRAGGDTALSGDGD 1225
Query: 369 RACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAP 428
P ++ + +L Q E+ ARL L A P P P
Sbjct: 1226 PPKPERKGPEMPRLFLDLGPPQGN--------SEQIKARLSRLSLALPPLTLTPFPGPGP 1277
Query: 429 KRPP--DPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQAS 476
+RPP G A AGG +D D + ++++ G A+
Sbjct: 1278 RRPPWEGADAGAAGGEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAPGAAA 1327
>gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo
sapiens]
Length = 1690
Score = 41.6 bits (96), Expect = 0.005
Identities = 80/314 (25%), Positives = 99/314 (31%), Gaps = 56/314 (17%)
Query: 162 CLPPYLVSGLPPEHPCDWPLTPHPWVYSGGQPKVPSAFSLGSKGFY-YKDPSIPRLAKEP 220
C P G P P P + S G + G +GF P P+ K P
Sbjct: 41 CFPEKGARGRPGPIGIQGPTGPQGFTGSTGLSGLK-----GERGFPGLLGPYGPKGDKGP 95
Query: 221 LAAAEPGLFGLNS-GGHLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSW 279
+ PG G+N GH + G P L +G GA + PD P
Sbjct: 96 MGV--PGFLGINGIPGHPGQPGPRGPPGLDGCNGTQGA--------VGFPGPDGYPGLLG 145
Query: 280 PACPPGLVHTLGNVWAGPG--------------DGNLGYQLGPPATPRCPSPEPPVTQRG 325
P PG + G+ PG DG G Q G P P P P +G
Sbjct: 146 PPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDGITGPQ-GAPGFPGAVGPAGPPGLQG 204
Query: 326 CCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPS-------HHTK 378
PP G LGP G G +G + GP PPS K
Sbjct: 205 -----PPGPPGPLGPDGNMGLGFQGEKGVKGDVG-----LPGPAGPPPSTGELEFMGFPK 254
Query: 379 LKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGT 438
KK S+ P+G P + P L G +G G P P P
Sbjct: 255 GKK-----GSKGEPGPKGFPGISGPP--GFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSE 307
Query: 439 AEQGAGGWQEVRDT 452
QG G Q + T
Sbjct: 308 GVQGPPGQQGKKGT 321
>gi|31442420 shroom family member 1 [Homo sapiens]
Length = 847
Score = 41.6 bits (96), Expect = 0.005
Identities = 44/159 (27%), Positives = 55/159 (34%), Gaps = 21/159 (13%)
Query: 293 VWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGL---- 348
VW GPG PP C SP P P G GP + L
Sbjct: 66 VWGGPGPA-------PPDAALCTSPRPRPAVAARSGPQPTEVPGTPGPLNRQATPLLYAL 118
Query: 349 ----EGGASGASEPSEEVNKASGPRACPPSHHTKLKKTWLTRHSEQFECP-RGCPEVEER 403
E A PS ++A+ + + L++T R + P R P V R
Sbjct: 119 AAEAEAAAQAVEPPSPPASRAAYRQRLQGAQRRVLRETSFQRKELRMSLPARLRPTVPAR 178
Query: 404 PVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQG 442
P A R+ S G G PA R P PGTA +G
Sbjct: 179 PPA---THPRSASLSHPGGEGEPARSRA--PAPGTAGRG 212
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 40.8 bits (94), Expect = 0.008
Identities = 92/374 (24%), Positives = 121/374 (32%), Gaps = 85/374 (22%)
Query: 172 PPE-HPCDWPLTPHPWVYSGGQPKVPSAFSLGSKGFYYK------DPSIPRLA---KEPL 221
PPE HP P +P P + V ++G G P LA + P
Sbjct: 1023 PPEGHPTPRPASPEPGRVATVLASVKHKEAIGPGGEVVNRRRTLSGPVTGLLATARRGPG 1082
Query: 222 AAAEPGLFGLNSGGHLQRAGEA------ERPSLHQRDGEMGAGR-------QQNPCPLFL 268
+A+PG F + G + G + E P L + + R QQ L
Sbjct: 1083 ESADPGPFVEDGTGRQRPRGPSKGEAGVEGPPLAKVEASATLKRRIRAKQNQQENVKFIL 1142
Query: 269 GQPDTVPWT-------SWPACPPGLV---HTLGNVWAGPGDGNLGYQLGPPATPRCPSP- 317
+ DTV + P PP L + G V P Q GPP P P P
Sbjct: 1143 TESDTVKRRPKAKEREAGPEPPPPLSVYHNGTGTVRRRPASE----QAGPPELPPPPPPA 1198
Query: 318 EPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHT 377
EPP T PP +G E K + P P
Sbjct: 1199 EPPPTDLAHLPPLPPPEG-------------------------EARKPAKPPVSP----- 1228
Query: 378 KLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPG 437
K LT+ + + G P P ++ L GSPEV+ A G+P P P P P
Sbjct: 1229 ---KPVLTQPVPKLQ---GSPT----PTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPP 1278
Query: 438 TAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKG-------PQDGQASLQDPGLQDIPCLAL 490
TA + + S G S P AS P P L +
Sbjct: 1279 TAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHV 1338
Query: 491 PAKLAQCQSCAQAA 504
PAK + + A AA
Sbjct: 1339 PAKPPRAAAAAAAA 1352
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 40.8 bits (94), Expect = 0.008
Identities = 94/352 (26%), Positives = 114/352 (32%), Gaps = 64/352 (18%)
Query: 104 LTHPLAFCGPACPPR--------CGPLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERA 155
L+H A P PPR PL P SG + P H P + A
Sbjct: 654 LSHWSALLSPPVPPRPPSSGPPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPA 713
Query: 156 P--FWVPTCLPPYLVSGLPPEHPCDWPLTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSI 213
P W PP + PE P D P P G + +AF GF P
Sbjct: 714 PQASWWAFVEPP----AVSPEVPPDLLAFPGPRPSFRGSRRRGAAF-----GFPGASPRA 764
Query: 214 PRL-AKEPLAAAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQPD 272
R A PLA+ +P L G+ P L R G QP
Sbjct: 765 SRRRAWSPLASPQPSLRSSPGLGYCSPLAPPS-PQLSLRTGPF--------------QPP 809
Query: 273 TVPWTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPP 332
+P PA P ++ P +LGPP +P SP PP G C S P
Sbjct: 810 FLP----PARRPR------SLQESPAPRRAAGRLGPPGSPLPGSPRPPSPPLGLCHS--P 857
Query: 333 TKGGGLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLKKTWLTRHSEQFE 392
+ P L SEP +A P+ P H W E E
Sbjct: 858 RRSSLNLP-----SRLPHTWRRLSEPP---TRAVKPQVRLPFHRPPRAGAW-RAPLEHRE 908
Query: 393 CPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAG 444
PR PE E P A S +V P +RPP P+PG A G
Sbjct: 909 SPRE-PEDSETP---WTVPPLAPSWDVD----MPPTQRPPSPWPGGAGSRRG 952
>gi|24308115 interferon regulatory factor 2 binding protein 1 [Homo
sapiens]
Length = 584
Score = 40.8 bits (94), Expect = 0.008
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 507 GGGHACHSQQVRRSPLGGELQQEEDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLGDRL 566
GG ++ + V SP+ L+ + +S + G G GP + G A S
Sbjct: 409 GGPYSAETPGVP-SPIAA-LKNVAEALGHSPKDPGGGGGP---VRAGGASPAASSTAQPP 463
Query: 567 C--RLLRREREA----LAWAQREGQGPAVTEDSPGIPRCCSRCHHGLFNTHW-RCPRC-S 618
RL+ R EA A A+ G + T +PG P CC+ C L +TH+ +CP
Sbjct: 464 TQHRLVARNGEAEVSPTAGAEAVSGGGSGTGATPGAPLCCTLCRERLEDTHFVQCPSVPG 523
Query: 619 HRLCVACGR 627
H+ C C R
Sbjct: 524 HKFCFPCSR 532
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 40.4 bits (93), Expect = 0.010
Identities = 68/241 (28%), Positives = 81/241 (33%), Gaps = 36/241 (14%)
Query: 225 EPGLFGLNSGGHLQRAGEAERPSLHQRDGEMG----AGRQQNPCPL----FLGQPDTVPW 276
EPG G++ G + G P DGE G AG + P P F G P +P
Sbjct: 229 EPGEPGVS--GPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPG-LPG 285
Query: 277 TSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGG 336
PGL G A G + G P P P P RG P + G
Sbjct: 286 VKGHRGYPGLDGAKGEAGAPGVKG----ESGSPGENGSPGPMGP---RGL-----PGERG 333
Query: 337 GLGPCGKCQEGLEGGASGASEPSEEVNKASGPR-ACPPSHHTKLKKTWLTRHSEQFECPR 395
GP G G G + P V A GP P + T R E + PR
Sbjct: 334 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTG-ARGPEGAQGPR 392
Query: 396 GCPEVEERPVARLR-----------ALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAG 444
G P P A AG+P + GA G P P+ PP P T G
Sbjct: 393 GEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPK 452
Query: 445 G 445
G
Sbjct: 453 G 453
Score = 33.9 bits (76), Expect = 0.95
Identities = 62/246 (25%), Positives = 80/246 (32%), Gaps = 37/246 (15%)
Query: 202 GSKGFYYKDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGAGRQQ 261
G++GF P P L PGL G GEA P + G G +
Sbjct: 273 GARGF----PGTPGLPGVKGHRGYPGLDGAK--------GEAGAPGVKGESGSPG----E 316
Query: 262 NPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPV 321
N P +G P +P P G GN PG +GP P P
Sbjct: 317 NGSPGPMG-PRGLPGERGRTGPAGAAGARGND-GQPGPAGPPGPVGPAGGPGFPGAPGAK 374
Query: 322 TQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGAS--EPSEEVNKASGPRACPPSHHTKL 379
+ G + P G GP G+ G +GAS ++ + A G P
Sbjct: 375 GEAGPTGARGPE--GAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPG------ 426
Query: 380 KKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTA 439
+ F PRG P + L + G P + G G PK P P
Sbjct: 427 -----IAGAPGFPGPRG-PPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGP---AG 477
Query: 440 EQGAGG 445
QGA G
Sbjct: 478 PQGAPG 483
Score = 32.0 bits (71), Expect = 3.6
Identities = 74/272 (27%), Positives = 89/272 (32%), Gaps = 38/272 (13%)
Query: 219 EPLAAAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGA-GRQQNPCPLFL-GQPDTV-- 274
+P EPGL G G R G+A G G GR P P GQP +
Sbjct: 547 DPGRPGEPGLPGAR--GLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGF 604
Query: 275 PWTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTK 334
P PG G A PG L + G P P P +RG + P+
Sbjct: 605 PGPKGANGEPGKAGEKGLPGA-PGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSG 663
Query: 335 GGGL-GPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLKKTWLTRHSEQFEC 393
GL GP G EG + G G P E A P P + ++ +
Sbjct: 664 FQGLPGPPGPPGEGGKPGDQGV--PGE----AGAPGLVGPRGERGFPGERGSPGAQGLQG 717
Query: 394 PRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTS 453
PRG P G+P G G+ P PP QG G E
Sbjct: 718 PRGLP----------------GTPGTDGPKGASGPAGPPGAQGPPGLQGMPG--ERGAAG 759
Query: 454 IGNKDVDSGQHDEQKGPQ-----DGQASLQDP 480
I D G E KGP+ DG L P
Sbjct: 760 IAGPKGDRGDVGE-KGPEGAPGKDGGRGLTGP 790
Score = 30.8 bits (68), Expect = 8.0
Identities = 44/171 (25%), Positives = 59/171 (34%), Gaps = 33/171 (19%)
Query: 285 GLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCG-- 342
GL +G +G G ++GPP +RG + PP G GP G
Sbjct: 786 GLTGPIGPPGPAGANGEKG-EVGPPGPAGSAGARGAPGERG--ETGPPGPAGFAGPPGAD 842
Query: 343 -----KCQEGLEGGASGASEPSEEVNKASGPRACP-PSHHTKLKKTWLTRHSEQFECPRG 396
K ++G G A P + GP P P T + P+G
Sbjct: 843 GQPGAKGEQGEAGQKGDAGAPGPQ-----GPSGAPGPQGPTGVTG------------PKG 885
Query: 397 CPEVEERPVAR--LRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGG 445
+ P A A R G P G+ G+P P PP P +GA G
Sbjct: 886 ARGAQGPPGATGFPGAAGRVGPP---GSNGNPGPPGPPGPSGKDGPKGARG 933
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 40.4 bits (93), Expect = 0.010
Identities = 68/241 (28%), Positives = 81/241 (33%), Gaps = 36/241 (14%)
Query: 225 EPGLFGLNSGGHLQRAGEAERPSLHQRDGEMG----AGRQQNPCPL----FLGQPDTVPW 276
EPG G++ G + G P DGE G AG + P P F G P +P
Sbjct: 160 EPGEPGVS--GPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPG-LPG 216
Query: 277 TSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGG 336
PGL G A G + G P P P P RG P + G
Sbjct: 217 VKGHRGYPGLDGAKGEAGAPGVKG----ESGSPGENGSPGPMGP---RGL-----PGERG 264
Query: 337 GLGPCGKCQEGLEGGASGASEPSEEVNKASGPR-ACPPSHHTKLKKTWLTRHSEQFECPR 395
GP G G G + P V A GP P + T R E + PR
Sbjct: 265 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTG-ARGPEGAQGPR 323
Query: 396 GCPEVEERPVARLR-----------ALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAG 444
G P P A AG+P + GA G P P+ PP P T G
Sbjct: 324 GEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPK 383
Query: 445 G 445
G
Sbjct: 384 G 384
Score = 33.9 bits (76), Expect = 0.95
Identities = 62/246 (25%), Positives = 80/246 (32%), Gaps = 37/246 (15%)
Query: 202 GSKGFYYKDPSIPRLAKEPLAAAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGAGRQQ 261
G++GF P P L PGL G GEA P + G G +
Sbjct: 204 GARGF----PGTPGLPGVKGHRGYPGLDGAK--------GEAGAPGVKGESGSPG----E 247
Query: 262 NPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPV 321
N P +G P +P P G GN PG +GP P P
Sbjct: 248 NGSPGPMG-PRGLPGERGRTGPAGAAGARGND-GQPGPAGPPGPVGPAGGPGFPGAPGAK 305
Query: 322 TQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGAS--EPSEEVNKASGPRACPPSHHTKL 379
+ G + P G GP G+ G +GAS ++ + A G P
Sbjct: 306 GEAGPTGARGPE--GAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPG------ 357
Query: 380 KKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTA 439
+ F PRG P + L + G P + G G PK P P
Sbjct: 358 -----IAGAPGFPGPRG-PPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGP---AG 408
Query: 440 EQGAGG 445
QGA G
Sbjct: 409 PQGAPG 414
Score = 32.0 bits (71), Expect = 3.6
Identities = 74/272 (27%), Positives = 89/272 (32%), Gaps = 38/272 (13%)
Query: 219 EPLAAAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGA-GRQQNPCPLFL-GQPDTV-- 274
+P EPGL G G R G+A G G GR P P GQP +
Sbjct: 478 DPGRPGEPGLPGAR--GLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGF 535
Query: 275 PWTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTK 334
P PG G A PG L + G P P P +RG + P+
Sbjct: 536 PGPKGANGEPGKAGEKGLPGA-PGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSG 594
Query: 335 GGGL-GPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLKKTWLTRHSEQFEC 393
GL GP G EG + G G P E A P P + ++ +
Sbjct: 595 FQGLPGPPGPPGEGGKPGDQGV--PGE----AGAPGLVGPRGERGFPGERGSPGAQGLQG 648
Query: 394 PRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTS 453
PRG P G+P G G+ P PP QG G E
Sbjct: 649 PRGLP----------------GTPGTDGPKGASGPAGPPGAQGPPGLQGMPG--ERGAAG 690
Query: 454 IGNKDVDSGQHDEQKGPQ-----DGQASLQDP 480
I D G E KGP+ DG L P
Sbjct: 691 IAGPKGDRGDVGE-KGPEGAPGKDGGRGLTGP 721
Score = 30.8 bits (68), Expect = 8.0
Identities = 44/171 (25%), Positives = 59/171 (34%), Gaps = 33/171 (19%)
Query: 285 GLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCG-- 342
GL +G +G G ++GPP +RG + PP G GP G
Sbjct: 717 GLTGPIGPPGPAGANGEKG-EVGPPGPAGSAGARGAPGERG--ETGPPGPAGFAGPPGAD 773
Query: 343 -----KCQEGLEGGASGASEPSEEVNKASGPRACP-PSHHTKLKKTWLTRHSEQFECPRG 396
K ++G G A P + GP P P T + P+G
Sbjct: 774 GQPGAKGEQGEAGQKGDAGAPGPQ-----GPSGAPGPQGPTGVTG------------PKG 816
Query: 397 CPEVEERPVAR--LRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGG 445
+ P A A R G P G+ G+P P PP P +GA G
Sbjct: 817 ARGAQGPPGATGFPGAAGRVGPP---GSNGNPGPPGPPGPSGKDGPKGARG 864
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 40.4 bits (93), Expect = 0.010
Identities = 117/439 (26%), Positives = 148/439 (33%), Gaps = 89/439 (20%)
Query: 28 PGSPPRDGLHHGPLCLGEPAPFWRGVLSTPDSWLPPGFPQGPK-----DMLPLVEGEGPQ 82
PG P DG P G P +G P P G+P GP+ D + ++G +
Sbjct: 753 PGMPGADGPPGHPGKEGPPGE--KGGQGPPGPQGPIGYP-GPRGVKGADGIRGLKGTKGE 809
Query: 83 NGERKVNWLGSKEGLRWKEAMLTHPLAFCGPACPPRCGPLMPEHSGGHLKSDPVAFRPWH 142
GE G++ + P GP GP P+ GG DP P
Sbjct: 810 KGEDGFPGFKGDMGIKGDRGEIGPP----GPRGED--GPEGPKGRGGP-NGDPGPLGPPG 862
Query: 143 CPFLLETKILERAPFWVPTCLPPYLVSGLPPEHPCDWPLTPHPWVYSGGQPKVPSAFSLG 202
E+ VP LP Y P+ +P P GG+ G
Sbjct: 863 ----------EKGKLGVPG-LPGY-PGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRG 910
Query: 203 SKGFYYKDPSIPRLAKEPLA-AAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGAGRQQ 261
+G P+ PR + P +PG G NSGG G A P GE G Q
Sbjct: 911 QRG-----PTGPRGERGPRGITGKPGPKG-NSGGD----GPAGPP------GERGPNGPQ 954
Query: 262 NPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGD-GNLGYQ--LGPPATPRCPSPE 318
P P P PPG G+ PG G G+Q GPP P P+
Sbjct: 955 GPTGF--------PGPKGPPGPPGKDGLPGH----PGQRGETGFQGKTGPPGPPGVVGPQ 1002
Query: 319 PPVTQRGCCSSY-------PPTKGGGLGPCGKCQEGLEGGASGASEPSEE----VNKASG 367
P + G PP + G G GK EG +G A P ++ + G
Sbjct: 1003 GPTGETGPMGERGHPGPPGPPGEQGLPGLAGK--EGTKGDPGPAGLPGKDGPPGLRGFPG 1060
Query: 368 PRACP-PSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSP 426
R P P LK E P G P P R AG+ G G P
Sbjct: 1061 DRGLPGPVGALGLKGN---------EGPPGPPGPAGSPGER----GPAGAAGPIGIPGRP 1107
Query: 427 APKRPPDPFPGTAEQGAGG 445
P+ PP P E+GA G
Sbjct: 1108 GPQGPPGP---AGEKGAPG 1123
Score = 32.3 bits (72), Expect = 2.8
Identities = 77/278 (27%), Positives = 97/278 (34%), Gaps = 52/278 (18%)
Query: 241 GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGD- 299
G +P DGE G QQ LF + D P +P PPG V G + PG+
Sbjct: 1186 GPIGQPGPSGADGEPGPRGQQG---LFGQKGDEGP-RGFPG-PPGPVGLQG-LPGPPGEK 1239
Query: 300 ---GNLGYQLGPPATP--RCPSPEP----------------PVTQRG----CCSSYPPTK 334
G++G Q+GPP P R PS P V ++G P +
Sbjct: 1240 GETGDVG-QMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGE 1298
Query: 335 GGGLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLKKTWLTRHSEQFECP 394
GG GP G+ E E G SGA+ P GP+ P K + F
Sbjct: 1299 GGPPGPKGERGEKGESGPSGAAGP-------PGPKGPPGDDGPK-----GSPGPVGFPGD 1346
Query: 395 RGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGG--WQEVRDT 452
G P E P + G G GSP P P P ++G G E R
Sbjct: 1347 PG-PPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQG 1405
Query: 453 SIGNKDVDSGQHDEQK----GPQDGQASLQDPGLQDIP 486
G K + K GPQ GL+ IP
Sbjct: 1406 EKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIP 1443
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 39.7 bits (91), Expect = 0.017
Identities = 94/352 (26%), Positives = 119/352 (33%), Gaps = 78/352 (22%)
Query: 107 PLAFCGPACPPRCGPLMPEHS----GGHLKSDPVAFRPWHCPFLLETKILERAPFWVPTC 162
PL C A P PL P ++ G PV+ H P +L L AP
Sbjct: 259 PLFHCSDALTPP--PLPPSNNLPAHPGPASQPPVSSATMHLPLVLGP--LGGAPTVEGPG 314
Query: 163 LPPYLVSGL-----PPEHPCDWPLTPHPWVYSGGQPKV--PSAFSLGSKGFYYKDPSIPR 215
PP+L S L +HP PL P P G +P+ PSA S + P P
Sbjct: 315 APPFLASSLLSAAAKAQHP---PLPP-PSTLQGRRPRAQAPSASHSSSLRPSQRRPRRP- 369
Query: 216 LAKEPLAAAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVP 275
P +F L G R + R S R + P P+ QP ++P
Sbjct: 370 ----------PTVFRLLEG----RGPQTPRRS-----------RPRAPAPV--PQPFSLP 402
Query: 276 WTSWPACPPGLVHTLGNVWAGPG--DGN---LGYQLGPPATPRCPSPEPPVTQRGCCSSY 330
S P P ++ LG GP DG+ LG P P S PP + S
Sbjct: 403 EPSQPILP-SVLSLLGLPTPGPSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIQPSL 461
Query: 331 PPTKGGGLGPCGKCQEGLEGGASGA------SEPSEEVNKASGPRACPPSHHTKLKKTWL 384
P T G L + PSE + +GP ACP
Sbjct: 462 PGTTSGSLSSVPGAPAPPAASKAPVVPSPVLQSPSEGLGMGAGP-ACPLPP--------- 511
Query: 385 TRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFP 436
E F P PE + AL AG P + GA+ P P P P
Sbjct: 512 LAGGEAFPFPS--PE-------QGLALSGAGFPGMLGALPLPLSLGQPPPSP 554
Score = 36.2 bits (82), Expect = 0.19
Identities = 119/476 (25%), Positives = 150/476 (31%), Gaps = 100/476 (21%)
Query: 8 LKGTPTWEKTAPENGIVRQEPGSPPRDGLHHGPLCLGEPAP------FWRGVLS------ 55
L G + +PE G+ G P G PL LG+P P GVL+
Sbjct: 512 LAGGEAFPFPSPEQGLALSGAGFPGMLGALPLPLSLGQPPPSPLLNHSLFGVLTGGGGQP 571
Query: 56 TPDSWLPPGFPQGPKDMLPLVEGEGPQ-----------------NGERKVNWLGSKEGLR 98
P+ LPP P GP L E EGP N L S
Sbjct: 572 PPEPLLPP--PGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPPPSAPPSNLLAS----- 624
Query: 99 WKEAMLTHPLAFCGPACPPRCGPLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERAPFW 158
+ + P A G G E G P+ F P P T I +
Sbjct: 625 FLPLLALGPTAGDGEGSAEGAGGPSGEPFSGLGDLSPLLFPPLSAP---PTLIALNSALL 681
Query: 159 VPTCLPPYLVSGLPPEHPCDWPLTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSIPRLAK 218
T PP SG PP+ P V S QP P++ S DP L K
Sbjct: 682 AATLDPP---SGTPPQ----------PCVLSAPQPGPPTS----SVTTATTDPGASSLGK 724
Query: 219 EPLAAAEP-----GLFGLNSGGHLQ--RAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQP 271
P + P L G + G L + PSL Q G + +G+ G P
Sbjct: 725 APSNSGRPPQLLSPLLGASLLGDLSSLTSSPGALPSLLQPPGPLLSGQLGLQLLPGGGAP 784
Query: 272 DTVPWTSWP-AC-------PPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCP---SPEPP 320
+ S P AC PP P PP + P SP+PP
Sbjct: 785 PPLSEASSPLACLLQSLQIPPEQPEAPCLPPESPASALEPEPARPPLSALAPPHGSPDPP 844
Query: 321 VTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLK 380
V + G G G G+ G G +G + P+ + G R P +L
Sbjct: 845 VPEL--------LTGRGSGKRGRRGGGGLRGINGEARPAR--GRKPGSRREP----GRLA 890
Query: 381 KTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFP 436
W TR G ER R + G + A G PK PP P P
Sbjct: 891 LKWGTR--------GGFNGQMERSPRRTHHWQHNG----ELAEGGAEPKDPPPPGP 934
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 39.3 bits (90), Expect = 0.023
Identities = 65/247 (26%), Positives = 74/247 (29%), Gaps = 51/247 (20%)
Query: 241 GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDG 300
G P + DGE G QQ GQ +P PPG + G + PG+
Sbjct: 1168 GPVGAPGIAGGDGEPGPRGQQG----MFGQKGDEGARGFPG-PPGPIGLQG-LPGPPGEK 1221
Query: 301 NLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSE 360
+GP P P P P G G GP G G GG EP E
Sbjct: 1222 GENGDVGPMGPPGPPGPRGPQGPNGA--------DGPQGPPGSV--GSVGGVGEKGEPGE 1271
Query: 361 EVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQ 420
N PP E G P+ E AG P +
Sbjct: 1272 AGNPG------PPG-----------------EAGVGGPKGERGEKGEAGPPGAAGPPGAK 1308
Query: 421 GAMGSPAPKRPPDP--FPG----TAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQ 474
G G PK P P FPG E G G V +D D G Q GP
Sbjct: 1309 GPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDK--GEDGDPG----QPGPPGPS 1362
Query: 475 ASLQDPG 481
PG
Sbjct: 1363 GEAGPPG 1369
Score = 33.9 bits (76), Expect = 0.95
Identities = 54/190 (28%), Positives = 67/190 (35%), Gaps = 37/190 (19%)
Query: 271 PDTVPWTSWPACPPGLVHTLGNVWAGPGD-GNLGYQ--LGPPATPRCPSPEPPVTQRGCC 327
P P P PPG G+ PG G G+Q GPP P+ P + G
Sbjct: 938 PVGFPGPKGPPGPPGKDGLPGH----PGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPI 993
Query: 328 SSY-------PPTKGGGLGPCGKCQEGLEG-----GASGASEPSEEVNKASGPRACPPSH 375
PP + G G GK EG +G G SG P+ + G R P +
Sbjct: 994 GERGHPGPPGPPGEQGLPGAAGK--EGAKGDPGPQGISGKDGPAG-LRGFPGERGLPGAQ 1050
Query: 376 HTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPF 435
K E P+G P PV AG+ G G P P+ PP P
Sbjct: 1051 GAPGLKGG--------EGPQGPPG----PVGSPGERGSAGTAGPIGLPGRPGPQGPPGP- 1097
Query: 436 PGTAEQGAGG 445
E+GA G
Sbjct: 1098 --AGEKGAPG 1105
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 39.3 bits (90), Expect = 0.023
Identities = 65/247 (26%), Positives = 74/247 (29%), Gaps = 51/247 (20%)
Query: 241 GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDG 300
G P + DGE G QQ GQ +P PPG + G + PG+
Sbjct: 1117 GPVGAPGIAGGDGEPGPRGQQG----MFGQKGDEGARGFPG-PPGPIGLQG-LPGPPGEK 1170
Query: 301 NLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSE 360
+GP P P P P G G GP G G GG EP E
Sbjct: 1171 GENGDVGPMGPPGPPGPRGPQGPNGA--------DGPQGPPGSV--GSVGGVGEKGEPGE 1220
Query: 361 EVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQ 420
N PP E G P+ E AG P +
Sbjct: 1221 AGNPG------PPG-----------------EAGVGGPKGERGEKGEAGPPGAAGPPGAK 1257
Query: 421 GAMGSPAPKRPPDP--FPG----TAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQ 474
G G PK P P FPG E G G V +D D G Q GP
Sbjct: 1258 GPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDK--GEDGDPG----QPGPPGPS 1311
Query: 475 ASLQDPG 481
PG
Sbjct: 1312 GEAGPPG 1318
Score = 33.9 bits (76), Expect = 0.95
Identities = 54/190 (28%), Positives = 67/190 (35%), Gaps = 37/190 (19%)
Query: 271 PDTVPWTSWPACPPGLVHTLGNVWAGPGD-GNLGYQ--LGPPATPRCPSPEPPVTQRGCC 327
P P P PPG G+ PG G G+Q GPP P+ P + G
Sbjct: 887 PVGFPGPKGPPGPPGKDGLPGH----PGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPI 942
Query: 328 SSY-------PPTKGGGLGPCGKCQEGLEG-----GASGASEPSEEVNKASGPRACPPSH 375
PP + G G GK EG +G G SG P+ + G R P +
Sbjct: 943 GERGHPGPPGPPGEQGLPGAAGK--EGAKGDPGPQGISGKDGPAG-LRGFPGERGLPGAQ 999
Query: 376 HTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPF 435
K E P+G P PV AG+ G G P P+ PP P
Sbjct: 1000 GAPGLKGG--------EGPQGPPG----PVGSPGERGSAGTAGPIGLPGRPGPQGPPGP- 1046
Query: 436 PGTAEQGAGG 445
E+GA G
Sbjct: 1047 --AGEKGAPG 1054
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 39.3 bits (90), Expect = 0.023
Identities = 65/247 (26%), Positives = 74/247 (29%), Gaps = 51/247 (20%)
Query: 241 GEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDG 300
G P + DGE G QQ GQ +P PPG + G + PG+
Sbjct: 1156 GPVGAPGIAGGDGEPGPRGQQG----MFGQKGDEGARGFPG-PPGPIGLQG-LPGPPGEK 1209
Query: 301 NLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSE 360
+GP P P P P G G GP G G GG EP E
Sbjct: 1210 GENGDVGPMGPPGPPGPRGPQGPNGA--------DGPQGPPGSV--GSVGGVGEKGEPGE 1259
Query: 361 EVNKASGPRACPPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQ 420
N PP E G P+ E AG P +
Sbjct: 1260 AGNPG------PPG-----------------EAGVGGPKGERGEKGEAGPPGAAGPPGAK 1296
Query: 421 GAMGSPAPKRPPDP--FPG----TAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQ 474
G G PK P P FPG E G G V +D D G Q GP
Sbjct: 1297 GPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDK--GEDGDPG----QPGPPGPS 1350
Query: 475 ASLQDPG 481
PG
Sbjct: 1351 GEAGPPG 1357
Score = 33.9 bits (76), Expect = 0.95
Identities = 54/190 (28%), Positives = 67/190 (35%), Gaps = 37/190 (19%)
Query: 271 PDTVPWTSWPACPPGLVHTLGNVWAGPGD-GNLGYQ--LGPPATPRCPSPEPPVTQRGCC 327
P P P PPG G+ PG G G+Q GPP P+ P + G
Sbjct: 926 PVGFPGPKGPPGPPGKDGLPGH----PGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPI 981
Query: 328 SSY-------PPTKGGGLGPCGKCQEGLEG-----GASGASEPSEEVNKASGPRACPPSH 375
PP + G G GK EG +G G SG P+ + G R P +
Sbjct: 982 GERGHPGPPGPPGEQGLPGAAGK--EGAKGDPGPQGISGKDGPAG-LRGFPGERGLPGAQ 1038
Query: 376 HTKLKKTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPF 435
K E P+G P PV AG+ G G P P+ PP P
Sbjct: 1039 GAPGLKGG--------EGPQGPPG----PVGSPGERGSAGTAGPIGLPGRPGPQGPPGP- 1085
Query: 436 PGTAEQGAGG 445
E+GA G
Sbjct: 1086 --AGEKGAPG 1093
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 39.3 bits (90), Expect = 0.023
Identities = 82/353 (23%), Positives = 104/353 (29%), Gaps = 100/353 (28%)
Query: 225 EPGLFGLNSGGHLQRAGEAERPS-LHQRDGEMGAGR-----------------------Q 260
EPG SGG AG ++ P L G MGAG+
Sbjct: 538 EPG----GSGGSPDGAGGSKLPPVLANLMGSMGAGKGPQGPGGGGINVQEILTSIMGSPN 593
Query: 261 QNPCPLFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPP 320
+P L QPD P GL+ GPG G+ G P P+
Sbjct: 594 SHPSEELLKQPDYSDKIKQMLVPHGLL--------GPGPIANGFPPGGPGGPKG------ 639
Query: 321 VTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLK 380
+PP GG + G GG G P + GP PP
Sbjct: 640 ------MQHFPPGPGGPM-------PGPHGGPGGPVGP-----RLLGP---PPP------ 672
Query: 381 KTWLTRHSEQFECPRGCPEVEERPVARLRALKRAGSP--------EVQGAMGSPAPKRPP 432
PRG + P +R G P +G G P PP
Sbjct: 673 -------------PRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPPP 719
Query: 433 DPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQDPGLQDIPCLALPA 492
PF G +GG G V G H +GP G + + P + +
Sbjct: 720 PPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGS 779
Query: 493 KLAQCQSCAQAAGEGGGHACHSQQVRRSPLGGELQQEEDTATNSSSEEGPGSG 545
+ + G GGGH H P GG + EGPG G
Sbjct: 780 GHRPHEGPGGSMGGGGGHRPH-----EGPGGG-----ISGGSGHRPHEGPGGG 822
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,015,661
Number of Sequences: 37866
Number of extensions: 4025113
Number of successful extensions: 17749
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 351
Number of HSP's that attempted gapping in prelim test: 15901
Number of HSP's gapped (non-prelim): 2253
length of query: 1189
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1076
effective length of database: 13,968,660
effective search space: 15030278160
effective search space used: 15030278160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.