Guide to the Human Genome
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Name: IRF2BP2 Sequence: fasta or formatted (587aa) NCBI GI: 116734704
Description:

interferon regulatory factor 2 binding protein 2 isoform A

Referenced in:

Interferon

Other entries for this name:
alt prot [571aa] interferon regulatory factor 2 binding protein 2 isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.0         82           4
 C cysteine            2.2         13           2
 D aspartate           2.6         15           1
 E glutamate           6.0         35           2
 F phenylalanine       2.2         13           1
 G glycine             8.9         52           2
 H histidine           2.7         16           1
 I isoleucine          1.7         10           1
 K lysine              4.1         24           2
 L leucine             7.3         43           2
 M methionine          1.4          8           1
 N asparagine          3.2         19           1
 P proline            12.3         72           4
 Q glutamine           4.6         27           5
 R arginine            6.1         36           2
 S serine              9.7         57           3
 T threonine           4.6         27           2
 V valine              4.9         29           1
 W tryptophan          0.9          5           1
 Y tyrosine            0.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interferon regulatory factor 2 binding protein 2 is... 
IRF2BP2               0.965   interferon regulatory factor 2 binding protein 2 is...
C14orf4               0.235   chromosome 14 open reading frame 4 
IRF2BP1               0.196   interferon regulatory factor 2 binding protein 1 [Ho...
NACA                  0.030   nascent polypeptide-associated complex alpha subuni...
GGN                   0.030   gametogenetin 
CASKIN2               0.027   cask-interacting protein 2 isoform b 
CASKIN2               0.027   cask-interacting protein 2 isoform a 
PCLO                  0.024   piccolo isoform 2 
PCLO                  0.024   piccolo isoform 1 
TAF4                  0.023   TBP-associated factor 4 
FLJ22184              0.022   PREDICTED: hypothetical protein FLJ22184 
CASKIN1               0.021   CASK interacting protein 1 
NKX1-1                0.021   PREDICTED: NK1 homeobox 1 
RAPH1                 0.021   Ras association and pleckstrin homology domains 1 is...
C2orf55               0.021   hypothetical protein LOC343990 
ARHGAP17              0.020   nadrin isoform 1 
SRRM1                 0.020   serine/arginine repetitive matrix 1 
LOC100289716          0.020   PREDICTED: hypothetical protein XP_002346898 
FLJ22184              0.020   PREDICTED: hypothetical protein LOC80164 
LOC100289602          0.020   PREDICTED: hypothetical protein XP_002342755 
LOC100289602          0.020   PREDICTED: hypothetical protein 
LOC100293812          0.020   PREDICTED: hypothetical protein 
WIPF2                 0.020   WIRE protein 
FBRSL1                0.020   fibrosin-like 1 
POU3F3                0.020   POU class 3 homeobox 3 
SAMD1                 0.020   sterile alpha motif domain containing 1 
RFX5                  0.019   regulatory factor X, 5 
RFX5                  0.019   regulatory factor X, 5 
NOLC1                 0.019   nucleolar and coiled-body phosphoprotein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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