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Search of human proteins with 22538814
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22538814 small inducible cytokine A5 precursor [Homo
sapiens]
(91 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 188 9e-49
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 103 4e-23
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 103 4e-23
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 102 9e-23
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 99 1e-21
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 94 2e-20
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 94 2e-20
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 76 5e-15
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 76 7e-15
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 71 2e-13
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 71 2e-13
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 71 2e-13
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 68 1e-12
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 67 4e-12
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 66 7e-12
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 65 9e-12
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 64 3e-11
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 63 6e-11
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 62 1e-10
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 61 2e-10
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 58 2e-09
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 54 2e-08
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 52 1e-07
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 51 2e-07
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 50 5e-07
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 49 9e-07
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 44 3e-05
gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... 43 5e-05
gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... 43 5e-05
gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... 43 5e-05
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 188 bits (477), Expect = 9e-49
Identities = 91/91 (100%), Positives = 91/91 (100%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP 60
MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP
Sbjct: 1 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP 60
Query: 61 AVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
AVVFVTRKNRQVCANPEKKWVREYINSLEMS
Sbjct: 61 AVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 103 bits (256), Expect = 4e-23
Identities = 45/92 (48%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN 59
M+VS AALAV+L ALC ++P ++DT T CCF+Y +R +P+ I +YF TS +CS
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK 60
Query: 60 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
P+V+F+T++ RQVCA+P ++WV++Y++ LE+S
Sbjct: 61 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELS 92
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 103 bits (256), Expect = 4e-23
Identities = 45/92 (48%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN 59
M+VS AALAV+L ALC ++P ++DT T CCF+Y +R +P+ I +YF TS +CS
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK 60
Query: 60 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
P+V+F+T++ RQVCA+P ++WV++Y++ LE+S
Sbjct: 61 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELS 92
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 102 bits (253), Expect = 9e-23
Identities = 45/91 (49%), Positives = 67/91 (73%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP 60
M+VS AALAV+L ALC SAS + T CCF+Y +R +P+ I +YF TS +CS P
Sbjct: 1 MQVSTAALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKP 60
Query: 61 AVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
V+F+T+++RQVCA+P ++WV++Y++ LE+S
Sbjct: 61 GVIFLTKRSRQVCADPSEEWVQKYVSDLELS 91
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 98.6 bits (244), Expect = 1e-21
Identities = 42/92 (45%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN 59
MK+ L+++++ A C+PA ++P SD T CCF+Y AR LPR + +Y+ TS CS
Sbjct: 1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
Query: 60 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
PAVVF T++++QVCA+P + WV+EY+ LE++
Sbjct: 61 PAVVFQTKRSKQVCADPSESWVQEYVYDLELN 92
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 94.0 bits (232), Expect = 2e-20
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN 59
MK+ L+++++ A C+ A ++P SD T CCF+Y AR LPR + +Y+ TS CS
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
Query: 60 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
PAVVF T++ +QVCA+P + WV+EY+ LE++
Sbjct: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 94.0 bits (232), Expect = 2e-20
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN 59
MK+ L+++++ A C+ A ++P SD T CCF+Y AR LPR + +Y+ TS CS
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
Query: 60 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
PAVVF T++ +QVCA+P + WV+EY+ LE++
Sbjct: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 76.3 bits (186), Expect = 5e-15
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDTTP--CCFAYIARPLPRAHIKEYFYTSGKCS 58
MK+S AA+ L+ T + S P CCF Y +PR I +Y+ T+ +CS
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
Query: 59 NPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
P +VF+T++ VC NP KWV++YI ++
Sbjct: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 75.9 bits (185), Expect = 7e-15
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP 60
MK AAAL V++ ALC S + ++ CC Y + +P+ I +Y TS +C P
Sbjct: 1 MKGLAAALLVLVCTMALC---SCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPKP 57
Query: 61 AVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
V+ +T++ RQ+CA+P KKWV++YI+ L+++
Sbjct: 58 GVILLTKRGRQICADPNKKWVQKYISDLKLN 88
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 71.2 bits (173), Expect = 2e-13
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 18/107 (16%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDTTP------------------CCFAYIARPL 42
MK+S AA+ L+ T + S + P CCF Y +
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKI 60
Query: 43 PRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
PR I +Y+ T+ +CS P +VF+T++ VC NP KWV++YI ++
Sbjct: 61 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 71.2 bits (173), Expect = 2e-13
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYF-YTSGKCSN 59
MKVSAA L ++LIA A A P S TT CCF R +P ++ Y TSGKC
Sbjct: 1 MKVSAALLWLLLIAAAFSPQGLAGPASVPTT-CCFNLANRKIPLQRLESYRRITSGKCPQ 59
Query: 60 PAVVFVTRKNRQVCANPEKKWVREYINSLE 89
AV+F T+ + +CA+P+KKWV++ + L+
Sbjct: 60 KAVIFKTKLAKDICADPKKKWVQDSMKYLD 89
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
sapiens]
Length = 94
Score = 71.2 bits (173), Expect = 2e-13
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 9 AVILIATALCAPASASPYSSDTTP-CCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTR 67
+ +L+A+ L + SD + CCF Y +PLP ++ Y +TS CS AV+F T+
Sbjct: 8 SAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTK 67
Query: 68 KNRQVCANPEKKWVREYINSLE 89
+ ++VC +P KKWV++YI+ L+
Sbjct: 68 RGKKVCTHPRKKWVQKYISLLK 89
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
sapiens]
Length = 99
Score = 68.2 bits (165), Expect = 1e-12
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYT-SGKCS 58
MK SAA L ++L A A A P +T T CC+ +I + +P+ ++ Y T S C
Sbjct: 1 MKASAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCP 60
Query: 59 NPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
AV+F T+ ++++CA+P +KWV++++ L+
Sbjct: 61 REAVIFKTKLDKEICADPTQKWVQDFMKHLD 91
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 66.6 bits (161), Expect = 4e-12
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 21/111 (18%)
Query: 1 MKVSAAALAVILIATALCAPASASP---------------------YSSDTTPCCFAYIA 39
MKVS AAL+ +++ TAL + A + + + + CC +Y
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
Query: 40 RPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLEM 90
R +P + ++ YF T+ +CS P V+F+T+K R+ CANP K V+ + L++
Sbjct: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKL 111
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 65.9 bits (159), Expect = 7e-12
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN 59
MKVSA L ++L+ A A P + + + CCF + ++ + +K Y T+ +C
Sbjct: 1 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQ 60
Query: 60 PAVVFVTRKNRQVCANPEKKWVREYINSL 88
AV+F T+ +++CA+P++KWV+ Y+ L
Sbjct: 61 KAVIFRTKLGKEICADPKEKWVQNYMKHL 89
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 65.5 bits (158), Expect = 9e-12
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 1 MKVSAAALAVILIATALCAPASASP----YSSDTTPCCFAYIARPLPRAHIKEYFYTSGK 56
MKVS AAL+++++ + + + + P + + + CC Y + LPR + Y +
Sbjct: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGY-RKALN 59
Query: 57 CSNPAVVFVTRKNRQVCANPEKKWVREYI 85
C PA++FVT++NR+VC NP WV+EYI
Sbjct: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYI 88
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 63.9 bits (154), Expect = 3e-11
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 1 MKVSAAALAVILIATALCAPASASPYS-SDTTPCCFAYIARPLPRAHIKEYF-YTSGKCS 58
MKVSAA L ++L+A A P S S CCF I R +P ++ Y T+ +C
Sbjct: 1 MKVSAALLCLLLMAATFSPQGLAQPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCP 60
Query: 59 NPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
AV+F T++ ++VCA+P+++WVR+ + L+
Sbjct: 61 KEAVIFKTKRGKEVCADPKERWVRDSMKHLD 91
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 62.8 bits (151), Expect = 6e-11
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 20/109 (18%)
Query: 1 MKVSAAALAVILIATALCAPA------------SASPYSSDTT--------PCCFAYIAR 40
MKVS AAL+ +++ L + A S P + CC +YI++
Sbjct: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
Query: 41 PLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
+P + +K YF TS +CS P V+F+T+K RQVCA P V++ + L+
Sbjct: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 61.6 bits (148), Expect = 1e-10
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 7 ALAVILIATALCAPAS-ASPYSS--DTTPCCFAYIARPLPRAHIKEYFYTSGKCSNPAVV 63
AL V+L+ A+ A+ A PY + + + CC Y+ LP +K +++TS C P VV
Sbjct: 7 ALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSCPRPGVV 66
Query: 64 FVTRKNRQVCANPEKKWVREYINSL 88
+T +++++CA+P WV+ +N L
Sbjct: 67 LLTFRDKEICADPRVPWVKMILNKL 91
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 61.2 bits (147), Expect = 2e-10
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 23 ASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVR 82
A+ + + + CC +Y R +P + ++ YF T+ +CS P V+F+T+K R+ CANP K V+
Sbjct: 61 AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
Query: 83 EYINSLEM 90
+ L++
Sbjct: 121 VCVRMLKL 128
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 57.8 bits (138), Expect = 2e-09
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYF-YTSGKCS 58
MKVSAA L ++LIA A P + + CC+ + R + + Y TS KC
Sbjct: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
Query: 59 NPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
AV+F T +++CA+P++KWV++ ++ L+
Sbjct: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 54.3 bits (129), Expect = 2e-08
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 7 ALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGK--CSNPAVVF 64
AL+++++ T+ PA ++D CC + +P+P ++ + Y K C PAVVF
Sbjct: 6 ALSLLVLWTS---PAPTLSGTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVF 62
Query: 65 VTRKNRQVCANPEKKWVREYINSLE 89
T + RQ+CA P++ WV I L+
Sbjct: 63 TTLRGRQLCAPPDQPWVERIIQRLQ 87
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 51.6 bits (122), Expect = 1e-07
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 33 CCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVR---EYINSLE 89
CC Y +P +K ++ TS CS A+VFVT + R +C++P K V+ +Y+ SLE
Sbjct: 33 CCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNAVKYLQSLE 92
Query: 90 MS 91
S
Sbjct: 93 RS 94
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 51.2 bits (121), Expect = 2e-07
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 31 TPCCFAYIARPLPRAHIKEYFYTS-GKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
+PCC ++++ +P + Y +S C V+F T+K +Q C +P+++WV+ Y+ +L+
Sbjct: 31 SPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNLD 90
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 49.7 bits (117), Expect = 5e-07
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP 60
M++ AL I TA S S T C + + LP + IK Y T G S
Sbjct: 1 MRLLILALLGICSLTAYIVEGVGSEVSDKRT--CVSLTTQRLPVSRIKTYTITEG--SLR 56
Query: 61 AVVFVTRKNRQVCANPEKKWVREYINSLE 89
AV+F+T++ +VCA+P+ WVR+ + S++
Sbjct: 57 AVIFITKRGLKVCADPQATWVRDVVRSMD 85
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 48.9 bits (115), Expect = 9e-07
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 1 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP 60
M++ AL I TA S S T C + + LP + IK Y T G S
Sbjct: 1 MRLLILALLGICSLTAYIVEGVGSEVSHRRT--CVSLTTQRLPVSRIKTYTITEG--SLR 56
Query: 61 AVVFVTRKNRQVCANPEKKWVREYINSLE 89
AV+F+T++ +VCA+P+ WVR+ + S++
Sbjct: 57 AVIFITKRGLKVCADPQATWVRDVVRSMD 85
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 7 ALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGK--CSNPAVVF 64
AL+++++ A P + CC Y R +P ++ Y CS PA++F
Sbjct: 6 ALSLLILVLAFGIPRTQGS-DGGAQDCCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILF 64
Query: 65 VTRKNRQ--VCANPEKKWVREYINSLE 89
+ RK Q +CA+P++ WV++ + L+
Sbjct: 65 LPRKRSQAELCADPKELWVQQLMQHLD 91
>gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal
cell-derived factor 1) isoform beta [Homo sapiens]
Length = 93
Score = 43.1 bits (100), Expect = 5e-05
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 8 LAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEY-FYTSGKCSNPAVVFVT 66
+ ++L+ TALC S PC F + RA++K + C+ V +
Sbjct: 7 VVLVLVLTALCLSDGKPVSLSYRCPCRF--FESHVARANVKHLKILNTPNCALQIVARLK 64
Query: 67 RKNRQVCANPEKKWVREYI 85
NRQVC +P+ KW++EY+
Sbjct: 65 NNNRQVCIDPKLKWIQEYL 83
>gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal
cell-derived factor 1) isoform gamma [Homo sapiens]
Length = 119
Score = 43.1 bits (100), Expect = 5e-05
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 8 LAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEY-FYTSGKCSNPAVVFVT 66
+ ++L+ TALC S PC F + RA++K + C+ V +
Sbjct: 7 VVLVLVLTALCLSDGKPVSLSYRCPCRF--FESHVARANVKHLKILNTPNCALQIVARLK 64
Query: 67 RKNRQVCANPEKKWVREYI 85
NRQVC +P+ KW++EY+
Sbjct: 65 NNNRQVCIDPKLKWIQEYL 83
>gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal
cell-derived factor 1) isoform alpha [Homo sapiens]
Length = 89
Score = 43.1 bits (100), Expect = 5e-05
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 8 LAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEY-FYTSGKCSNPAVVFVT 66
+ ++L+ TALC S PC F + RA++K + C+ V +
Sbjct: 7 VVLVLVLTALCLSDGKPVSLSYRCPCRF--FESHVARANVKHLKILNTPNCALQIVARLK 64
Query: 67 RKNRQVCANPEKKWVREYI 85
NRQVC +P+ KW++EY+
Sbjct: 65 NNNRQVCIDPKLKWIQEYL 83
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.129 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,637,744
Number of Sequences: 37866
Number of extensions: 149297
Number of successful extensions: 383
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 326
Number of HSP's gapped (non-prelim): 45
length of query: 91
length of database: 18,247,518
effective HSP length: 62
effective length of query: 29
effective length of database: 15,899,826
effective search space: 461094954
effective search space used: 461094954
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.