Guide to the Human Genome
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Search of human proteins with 223972670

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo
sapiens]
         (273 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens]   546   e-156
gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens]     510   e-145
gi|4504421 hepatic leukemia factor [Homo sapiens]                     298   4e-81
gi|31542493 D site of albumin promoter (albumin D-box) binding p...   221   4e-58
gi|52630429 nuclear factor, interleukin 3 regulated [Homo sapiens]     64   1e-10
gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo ...    63   3e-10
gi|5453563 basic leucine zipper transcription factor, ATF-like [...    47   2e-05
gi|8924246 basic leucine zipper transcription factor, ATF-like 3...    44   2e-04
gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens]         43   3e-04
gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog ...    43   3e-04
gi|4885245 FOS-like antigen 2 [Homo sapiens]                           42   8e-04
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is...    41   0.001
gi|4502769 CCAAT/enhancer binding protein gamma [Homo sapiens]         40   0.002
gi|33469974 activating transcription factor 4 [Homo sapiens]           39   0.005
gi|33469976 activating transcription factor 4 [Homo sapiens]           39   0.005
gi|194239643 activating transcription factor 7 isoform 3 [Homo s...    39   0.006
gi|5802980 activating transcription factor 7 isoform 2 [Homo sap...    39   0.006
gi|194239640 activating transcription factor 7 isoform 1 [Homo s...    39   0.006
gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]        38   0.008
gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens]       38   0.008
gi|205277419 Jun dimerization protein 2 isoform a [Homo sapiens]       38   0.008
gi|205277417 Jun dimerization protein 2 isoform a [Homo sapiens]       38   0.008
gi|18497306 Jun dimerization protein 2 isoform a [Homo sapiens]        38   0.008
gi|59938776 cAMP responsive element binding protein 5 isoform de...    38   0.011
gi|59938774 cAMP responsive element binding protein 5 isoform be...    38   0.011
gi|59938772 cAMP responsive element binding protein 5 isoform ga...    38   0.011
gi|59938770 cAMP responsive element binding protein 5 isoform al...    38   0.011
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]        38   0.011
gi|45238854 basic leucine zipper transcription factor, ATF-like ...    38   0.011
gi|22538422 activating transcription factor 2 [Homo sapiens]           37   0.018

>gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens]
          Length = 273

 Score =  546 bits (1407), Expect = e-156
 Identities = 273/273 (100%), Positives = 273/273 (100%)

Query: 1   MDMPEVLKSLLEHSLPWPEKRTDKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYD 60
           MDMPEVLKSLLEHSLPWPEKRTDKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYD
Sbjct: 1   MDMPEVLKSLLEHSLPWPEKRTDKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYD 60

Query: 61  GESFHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQ 120
           GESFHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQ
Sbjct: 61  GESFHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQ 120

Query: 121 PSETVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRKHKFAE 180
           PSETVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRKHKFAE
Sbjct: 121 PSETVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRKHKFAE 180

Query: 181 EDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEK 240
           EDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEK
Sbjct: 181 EDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEK 240

Query: 241 ENTALRTEVAELRKEVGKCKTIVSKYETKYGPL 273
           ENTALRTEVAELRKEVGKCKTIVSKYETKYGPL
Sbjct: 241 ENTALRTEVAELRKEVGKCKTIVSKYETKYGPL 273


>gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens]
          Length = 303

 Score =  510 bits (1313), Expect = e-145
 Identities = 260/270 (96%), Positives = 262/270 (97%), Gaps = 2/270 (0%)

Query: 4   PEVLKSLLEHSLPWPEKRTDKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGES 63
           P VLK L+E+  P  E R DKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGES
Sbjct: 36  PLVLKKLMEN--PPREARLDKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGES 93

Query: 64  FHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQPSE 123
           FHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQPSE
Sbjct: 94  FHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQPSE 153

Query: 124 TVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRKHKFAEEDL 183
           TVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRKHKFAEEDL
Sbjct: 154 TVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRKHKFAEEDL 213

Query: 184 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 243
           KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT
Sbjct: 214 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 273

Query: 244 ALRTEVAELRKEVGKCKTIVSKYETKYGPL 273
           ALRTEVAELRKEVGKCKTIVSKYETKYGPL
Sbjct: 274 ALRTEVAELRKEVGKCKTIVSKYETKYGPL 303


>gi|4504421 hepatic leukemia factor [Homo sapiens]
          Length = 295

 Score =  298 bits (762), Expect = 4e-81
 Identities = 158/278 (56%), Positives = 200/278 (71%), Gaps = 13/278 (4%)

Query: 6   VLKSLLEHSLPWPEKRTD---KEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGE 62
           VL+SLLE+ L  P    D   K+K KEK  +DE+ +  T+  SA L P +WDKT+PYDG+
Sbjct: 21  VLRSLLENPLKLPLHHEDAFSKDKDKEKKLDDESNSP-TVPQSAFLGPTLWDKTLPYDGD 79

Query: 63  SFHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQPS 122
           +F LEYMDL+EFL ENGIP SP+   H+   P   L+   SA+ S     S ++A   P 
Sbjct: 80  TFQLEYMDLEEFLSENGIPPSPSQHDHSPHPP--GLQPASSAAPSVMDLSSRASAPLHPG 137

Query: 123 ETVSSTESS-------LEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRK 175
               +   S       L   R TPSPIDP+ ++V V + PDPADL LSS+PG E+F+PRK
Sbjct: 138 IPSPNCMQSPIRPGQLLPANRNTPSPIDPDTIQVPVGYEPDPADLALSSIPGQEMFDPRK 197

Query: 176 HKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRA 235
            KF+EE+LKPQPMIKKA+KVF+PD+ KD+KYW RR+KNN+AAKRSRDARRLKENQI IRA
Sbjct: 198 RKFSEEELKPQPMIKKARKVFIPDDLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRA 257

Query: 236 AFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYGPL 273
           +FLEKEN+ALR EVA+LRKE+GKCK I++KYE ++GPL
Sbjct: 258 SFLEKENSALRQEVADLRKELGKCKNILAKYEARHGPL 295


>gi|31542493 D site of albumin promoter (albumin D-box) binding
           protein [Homo sapiens]
          Length = 325

 Score =  221 bits (564), Expect = 4e-58
 Identities = 118/232 (50%), Positives = 157/232 (67%), Gaps = 12/232 (5%)

Query: 48  LMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKES---A 104
           L P +W++T+P+      +EY+DLD FLLE+G+P SP         P        S    
Sbjct: 100 LAPLLWERTLPFGD----VEYVDLDAFLLEHGLPPSPPPPGGPSPEPSPARTPAPSPGPG 155

Query: 105 SSSTASPPSSSTAIFQPSETVSSTESSLEK---ERETPSPIDPNCVEVDVNFNPDPADLV 161
           S  +ASP SS      P+     T S        R+TPSP+DP+ VEV + F PDPADL 
Sbjct: 156 SCGSASPRSSPG--HAPARAALGTASGHRAGLTSRDTPSPVDPDTVEVLMTFEPDPADLA 213

Query: 162 LSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSR 221
           LSS+PG E F+PR+H+F+EE+LKPQP++KKA+K+ VP+EQKDEKYW+RR KNN AAKRSR
Sbjct: 214 LSSIPGHETFDPRRHRFSEEELKPQPIMKKARKIQVPEEQKDEKYWSRRYKNNEAAKRSR 273

Query: 222 DARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYGPL 273
           DARRLKENQI++RAAFLEKEN  LR EV  +R+E+   + ++S+Y+ ++G L
Sbjct: 274 DARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLSRYQAQHGAL 325


>gi|52630429 nuclear factor, interleukin 3 regulated [Homo sapiens]
          Length = 462

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 29/67 (43%), Positives = 44/67 (65%)

Query: 191 KAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVA 250
           + K+ F+PDE+KD  YW +R+KNN AAKRSR+ RRL +  +  +   L +EN  L+ E+ 
Sbjct: 61  RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL 120

Query: 251 ELRKEVG 257
            L+ + G
Sbjct: 121 SLKLKFG 127


>gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo
           sapiens]
          Length = 369

 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)

Query: 187 PMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALR 246
           P I++ ++ F+P+E+KD  YW +R+KNN AAKRSR+ RRL +  I  R A L +EN  L+
Sbjct: 61  PSIRRQRE-FMPEEKKDTVYWEKRRKNNEAAKRSREKRRLNDAAIEGRLAALMEENALLK 119

Query: 247 TEVAELRKEVG 257
            E+  L+   G
Sbjct: 120 GELKALKLRFG 130


>gi|5453563 basic leucine zipper transcription factor, ATF-like
           [Homo sapiens]
          Length = 125

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 22/69 (31%), Positives = 42/69 (60%)

Query: 199 DEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 258
           D   D +   RR+KN +AA++SR  +  K + + + +  LEK+N ALR E+ +L +E+  
Sbjct: 22  DSSDDVRRVQRREKNRIAAQKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKY 81

Query: 259 CKTIVSKYE 267
             ++++ +E
Sbjct: 82  FTSVLNSHE 90


>gi|8924246 basic leucine zipper transcription factor, ATF-like 3
           [Homo sapiens]
          Length = 127

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 23/67 (34%), Positives = 40/67 (59%)

Query: 201 QKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCK 260
           + D++   RR+KN VAA+RSR  +  K +++      LE+ENT LR E+ +L +E+    
Sbjct: 33  EDDDRKVRRREKNRVAAQRSRKKQTQKADKLHEEYESLEQENTMLRREIGKLTEELKHLT 92

Query: 261 TIVSKYE 267
             + ++E
Sbjct: 93  EALKEHE 99


>gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens]
          Length = 345

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 185 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 244
           P P   K+K     D+  DE Y  RR++NN+A ++SRD  +++  +   +   L  EN  
Sbjct: 254 PAPSQVKSKAKKTVDKHSDE-YKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENER 312

Query: 245 LRTEVAELRKEVGKCKTI 262
           L+ +V +L +E+   + +
Sbjct: 313 LQKKVEQLSRELSTLRNL 330


>gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog
           [Homo sapiens]
          Length = 380

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 26/78 (33%), Positives = 44/78 (56%)

Query: 189 IKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTE 248
           I +  KV     +++EK   RR++N +AA + R+ RR   + +      LE E +AL+TE
Sbjct: 123 IGRRGKVEQLSPEEEEKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTE 182

Query: 249 VAELRKEVGKCKTIVSKY 266
           +A L KE  K + I++ +
Sbjct: 183 IANLLKEKEKLEFILAAH 200


>gi|4885245 FOS-like antigen 2 [Homo sapiens]
          Length = 326

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 21/58 (36%), Positives = 36/58 (62%)

Query: 201 QKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 258
           +++EK   RR++N +AA + R+ RR    ++      LE+E + L+ E+AEL+KE  K
Sbjct: 122 EEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEK 179


>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
           isoform 1 [Homo sapiens]
          Length = 338

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/55 (36%), Positives = 35/55 (63%)

Query: 201 QKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKE 255
           +++EK   RR++N +AA + R+ RR   +++      LE+E   L +E+AEL+KE
Sbjct: 153 EEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKE 207


>gi|4502769 CCAAT/enhancer binding protein gamma [Homo sapiens]
          Length = 150

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 190 KKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEV 249
           K++KK    D   DE Y  RR++NN+A K+SR   + K      R   L++EN  L  ++
Sbjct: 50  KQSKKSSPMDRNSDE-YRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKI 108

Query: 250 AELRKEVGKCKTI 262
             L KE+   K +
Sbjct: 109 KLLTKELSVLKDL 121


>gi|33469974 activating transcription factor 4 [Homo sapiens]
          Length = 351

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 17/117 (14%)

Query: 155 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 214
           P P  L  S+ P  + ++P   K     +K + + KK KK+               ++N 
Sbjct: 247 PSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKM---------------EQNK 289

Query: 215 VAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYG 271
            AA R R  +R ++  +T     LEK+N AL+     L KE+   K ++ +     G
Sbjct: 290 TAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346


>gi|33469976 activating transcription factor 4 [Homo sapiens]
          Length = 351

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 17/117 (14%)

Query: 155 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 214
           P P  L  S+ P  + ++P   K     +K + + KK KK+               ++N 
Sbjct: 247 PSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKM---------------EQNK 289

Query: 215 VAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYG 271
            AA R R  +R ++  +T     LEK+N AL+     L KE+   K ++ +     G
Sbjct: 290 TAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346


>gi|194239643 activating transcription factor 7 isoform 3 [Homo
           sapiens]
          Length = 462

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 199 DEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 258
           DE  DE+     ++N  AA R R  R+L  + +  +A  L  +N  L  EV  LR EV +
Sbjct: 307 DEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQ 366

Query: 259 CKTIV 263
            K ++
Sbjct: 367 LKQLL 371


>gi|5802980 activating transcription factor 7 isoform 2 [Homo
           sapiens]
          Length = 483

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 199 DEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 258
           DE  DE+     ++N  AA R R  R+L  + +  +A  L  +N  L  EV  LR EV +
Sbjct: 328 DEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQ 387

Query: 259 CKTIV 263
            K ++
Sbjct: 388 LKQLL 392


>gi|194239640 activating transcription factor 7 isoform 1 [Homo
           sapiens]
          Length = 494

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 199 DEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 258
           DE  DE+     ++N  AA R R  R+L  + +  +A  L  +N  L  EV  LR EV +
Sbjct: 339 DEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQ 398

Query: 259 CKTIV 263
            K ++
Sbjct: 399 LKQLL 403


>gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]
          Length = 358

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 191 KAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVA 250
           KAKK     ++   +Y  RR++NN+A ++SRD  + +  +   +   L  +N  LR  V 
Sbjct: 273 KAKKSV---DKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVE 329

Query: 251 ELRKEVGKCKTI 262
           +L +E+   + I
Sbjct: 330 QLSRELDTLRGI 341


>gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens]
          Length = 174

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 7/72 (9%)

Query: 184 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 243
           +PQP+  +        ++++E+   RR+KN VAA R R+ ++ +   +   +  LE  N 
Sbjct: 71  RPQPVKSEL-------DEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNA 123

Query: 244 ALRTEVAELRKE 255
            L+T++ EL++E
Sbjct: 124 ELKTQIEELKQE 135


>gi|205277419 Jun dimerization protein 2 isoform a [Homo sapiens]
          Length = 163

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 7/72 (9%)

Query: 184 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 243
           +PQP+  +        ++++E+   RR+KN VAA R R+ ++ +   +   +  LE  N 
Sbjct: 60  RPQPVKSEL-------DEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNA 112

Query: 244 ALRTEVAELRKE 255
            L+T++ EL++E
Sbjct: 113 ELKTQIEELKQE 124


>gi|205277417 Jun dimerization protein 2 isoform a [Homo sapiens]
          Length = 163

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 7/72 (9%)

Query: 184 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 243
           +PQP+  +        ++++E+   RR+KN VAA R R+ ++ +   +   +  LE  N 
Sbjct: 60  RPQPVKSEL-------DEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNA 112

Query: 244 ALRTEVAELRKE 255
            L+T++ EL++E
Sbjct: 113 ELKTQIEELKQE 124


>gi|18497306 Jun dimerization protein 2 isoform a [Homo sapiens]
          Length = 163

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 7/72 (9%)

Query: 184 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 243
           +PQP+  +        ++++E+   RR+KN VAA R R+ ++ +   +   +  LE  N 
Sbjct: 60  RPQPVKSEL-------DEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNA 112

Query: 244 ALRTEVAELRKE 255
            L+T++ EL++E
Sbjct: 113 ELKTQIEELKQE 124


>gi|59938776 cAMP responsive element binding protein 5 isoform delta
           [Homo sapiens]
          Length = 369

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 185 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 244
           PQP   + ++V   DE  DE+     ++N  AA R R  R++    +  +A  L + N  
Sbjct: 220 PQPTGGRRRRVV--DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQ 277

Query: 245 LRTEVAELRKEVGKCKTIV 263
           L+ EV+ L+ EV + K ++
Sbjct: 278 LQNEVSMLKNEVAQLKQLL 296


>gi|59938774 cAMP responsive element binding protein 5 isoform beta
           [Homo sapiens]
          Length = 501

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 185 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 244
           PQP   + ++V   DE  DE+     ++N  AA R R  R++    +  +A  L + N  
Sbjct: 352 PQPTGGRRRRVV--DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQ 409

Query: 245 LRTEVAELRKEVGKCKTIV 263
           L+ EV+ L+ EV + K ++
Sbjct: 410 LQNEVSMLKNEVAQLKQLL 428


>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
           [Homo sapiens]
          Length = 475

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 185 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 244
           PQP   + ++V   DE  DE+     ++N  AA R R  R++    +  +A  L + N  
Sbjct: 326 PQPTGGRRRRVV--DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQ 383

Query: 245 LRTEVAELRKEVGKCKTIV 263
           L+ EV+ L+ EV + K ++
Sbjct: 384 LQNEVSMLKNEVAQLKQLL 402


>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
           [Homo sapiens]
          Length = 508

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 185 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 244
           PQP   + ++V   DE  DE+     ++N  AA R R  R++    +  +A  L + N  
Sbjct: 359 PQPTGGRRRRVV--DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQ 416

Query: 245 LRTEVAELRKEVGKCKTIV 263
           L+ EV+ L+ EV + K ++
Sbjct: 417 LQNEVSMLKNEVAQLKQLL 435


>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
          Length = 269

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 185 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 244
           P P  +K+     PD    E Y  RR++NN+A ++SRD  + +  ++  +   L  EN  
Sbjct: 174 PGPAREKSAGKRGPDRGSPE-YRQRRERNNIAVRKSRDKAKRRNQEMQQKLVELSAENEK 232

Query: 245 LRTEVAELRKEV 256
           L   V +L +++
Sbjct: 233 LHQRVEQLTRDL 244


>gi|45238854 basic leucine zipper transcription factor, ATF-like 2
           [Homo sapiens]
          Length = 274

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 19/57 (33%), Positives = 34/57 (59%)

Query: 200 EQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEV 256
           + K+++   +++KN  AA+RSR     K + +  +   LEK+N ALR E+  L+ E+
Sbjct: 14  DPKEQQRQLKKQKNRAAAQRSRQKHTDKADALHQQHESLEKDNLALRKEIQSLQAEL 70


>gi|22538422 activating transcription factor 2 [Homo sapiens]
          Length = 505

 Score = 37.0 bits (84), Expect = 0.018
 Identities = 23/79 (29%), Positives = 37/79 (46%)

Query: 185 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 244
           PQ      ++    +E  DEK     ++N  AA R R  R++    +  +A  L   N  
Sbjct: 334 PQTQSTSGRRRRAANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQ 393

Query: 245 LRTEVAELRKEVGKCKTIV 263
           L++EV  LR EV + K ++
Sbjct: 394 LQSEVTLLRNEVAQLKQLL 412


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.127    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,342,446
Number of Sequences: 37866
Number of extensions: 567310
Number of successful extensions: 3558
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 3302
Number of HSP's gapped (non-prelim): 344
length of query: 273
length of database: 18,247,518
effective HSP length: 101
effective length of query: 172
effective length of database: 14,423,052
effective search space: 2480764944
effective search space used: 2480764944
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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