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Search of human proteins with 114431216
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|114431216 tumor protein p53 inducible protein 13 [Homo
sapiens]
(393 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens] 805 0.0
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 43 4e-04
gi|38372931 brevican isoform 2 [Homo sapiens] 43 6e-04
gi|4758392 forkhead box D1 [Homo sapiens] 42 0.001
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 42 0.001
gi|18079216 CASK interacting protein 1 [Homo sapiens] 41 0.002
gi|154146199 sal-like 3 [Homo sapiens] 41 0.002
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 41 0.002
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 40 0.004
gi|163965366 nascent polypeptide-associated complex alpha subuni... 40 0.004
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 0.005
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 39 0.006
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 39 0.006
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 39 0.011
gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo ... 39 0.011
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 39 0.011
gi|150170699 kinesin family member 26A [Homo sapiens] 39 0.011
gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Hom... 38 0.014
gi|50428935 BPY2 interacting protein 1 [Homo sapiens] 38 0.014
gi|58331144 proline rich region 18 [Homo sapiens] 38 0.014
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 38 0.018
gi|167736355 mucin 4 isoform a [Homo sapiens] 38 0.018
gi|48762934 alpha 2 type I collagen [Homo sapiens] 37 0.024
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 37 0.024
gi|188536004 zinc finger protein 469 [Homo sapiens] 37 0.024
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 37 0.024
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 37 0.024
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 37 0.024
gi|49472835 bridging integrator 2 [Homo sapiens] 37 0.024
gi|239758067 PREDICTED: similar to facioscapulohumeral muscular ... 37 0.031
>gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens]
Length = 393
Score = 805 bits (2078), Expect = 0.0
Identities = 393/393 (100%), Positives = 393/393 (100%)
Query: 1 MAPPPPSPQLLLLAALARLLGPSEVMAGPAEEAGAHCPESLWPLPPQVSPRVTYTRVSPG 60
MAPPPPSPQLLLLAALARLLGPSEVMAGPAEEAGAHCPESLWPLPPQVSPRVTYTRVSPG
Sbjct: 1 MAPPPPSPQLLLLAALARLLGPSEVMAGPAEEAGAHCPESLWPLPPQVSPRVTYTRVSPG 60
Query: 61 QAEDVTFLYHPCAHPWLKLQLALLAYACMANPSLTPDFSLTQDRPLVLTAWGLALEMAWV 120
QAEDVTFLYHPCAHPWLKLQLALLAYACMANPSLTPDFSLTQDRPLVLTAWGLALEMAWV
Sbjct: 61 QAEDVTFLYHPCAHPWLKLQLALLAYACMANPSLTPDFSLTQDRPLVLTAWGLALEMAWV 120
Query: 121 EPAWAAHWLMRRRRRKQRKKKAWIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFALR 180
EPAWAAHWLMRRRRRKQRKKKAWIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFALR
Sbjct: 121 EPAWAAHWLMRRRRRKQRKKKAWIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFALR 180
Query: 181 SWRPPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIP 240
SWRPPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIP
Sbjct: 181 SWRPPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIP 240
Query: 241 GRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA 300
GRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA
Sbjct: 241 GRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA 300
Query: 301 RGPTPRTEEAAWAAMALTFLLVLLTLATLCTRLHRNFRRGESIYWGPTADSQDTVAAVLK 360
RGPTPRTEEAAWAAMALTFLLVLLTLATLCTRLHRNFRRGESIYWGPTADSQDTVAAVLK
Sbjct: 301 RGPTPRTEEAAWAAMALTFLLVLLTLATLCTRLHRNFRRGESIYWGPTADSQDTVAAVLK 360
Query: 361 RRLLQPSRRVKRSRRRPLLPPTPDSGPEGESSE 393
RRLLQPSRRVKRSRRRPLLPPTPDSGPEGESSE
Sbjct: 361 RRLLQPSRRVKRSRRRPLLPPTPDSGPEGESSE 393
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 43.1 bits (100), Expect = 4e-04
Identities = 75/320 (23%), Positives = 109/320 (34%), Gaps = 56/320 (17%)
Query: 3 PPPPSPQLLLLAALARLLGPSEVMAGPAEEAGAHCPESLWPLPPQVSPRVTYTRVSPGQA 62
PPP +P L + A +G + GA PES P+ P T + G+
Sbjct: 36 PPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESA----PRAGPTRTSRPPASGRG 91
Query: 63 EDVTFLYHPCAHPWLKLQLALLAYACMANPSLTPDFSLTQDRPLVLTAWGLALEMAWVEP 122
E A A P +P + RP L GL +
Sbjct: 92 ER-----------------APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI------- 127
Query: 123 AWAAHWLMRRRRRKQRKKKAWIYC---ESLSGPAPSEPTPGRGRLCRRGCVQALALAFAL 179
+A + R + + K++ + SGP P P+P R R + + L
Sbjct: 128 --SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE-VGLPRPA 184
Query: 180 RSWRP-PGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPG-------SLK 231
S RP P TE GPR+ SS ++ +P+ +A R PSA G SL
Sbjct: 185 PSARPRPPTE----GPRKSVSSASEHST------TEPSPAARRRPSAGGGLQRPASRSLS 234
Query: 232 AKQSMAGIPGRES----NAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQA 287
+ + P R P P P G A + P +P SS
Sbjct: 235 SSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP 294
Query: 288 SPAPRAAAPPRAARGPTPRT 307
P +APP + P+ +T
Sbjct: 295 LATPSPSAPPSPSAPPSLQT 314
Score = 36.6 bits (83), Expect = 0.040
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 21/143 (14%)
Query: 186 GTEVTSQGPRQPSSSGAK----------RRRLRAALGPQPTRSALRFPSAS-PGSLKAKQ 234
GT P QP G + R+ ALGP + S L PS S P S A
Sbjct: 252 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS-SPLATPSPSAPPSPSAPP 310
Query: 235 SMAGIPGRESNAPSVPTVSLLPGAPGGNASSR-------TEAQVPNGQGSPGGCVCSSQA 287
S+ +P + PS T SL G+P A+ + P Q P + QA
Sbjct: 311 SLQTLPSPPATPPSQATTSL--GSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQA 368
Query: 288 SPAPRAAAPPRAARGPTPRTEEA 310
P+P A+ P P+P+ A
Sbjct: 369 PPSPPASPPLSPLATPSPQAPNA 391
Score = 31.6 bits (70), Expect = 1.3
Identities = 39/126 (30%), Positives = 46/126 (36%), Gaps = 30/126 (23%)
Query: 185 PGTEVTSQGPRQPSSSGAKRR----RLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIP 240
P T Q PR+P + G RL AL P P PS SP S + +AG
Sbjct: 538 PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP----PSRSPSSTLSGPDLAG-- 591
Query: 241 GRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRA- 299
S+A S P L G G P G +S A AA P A
Sbjct: 592 -HSSSATSTPEE--LRGYDSG----------------PEGGAAASPPPDAELAACHPAAW 632
Query: 300 ARGPTP 305
+RGP P
Sbjct: 633 SRGPAP 638
Score = 28.9 bits (63), Expect = 8.4
Identities = 31/131 (23%), Positives = 41/131 (31%), Gaps = 11/131 (8%)
Query: 184 PPGTEVTSQGPRQPSSS-----GAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAG 238
PP + P P S G+ + + P P S L P A +
Sbjct: 309 PPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQA 368
Query: 239 IPGRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASP------APR 292
P ++ P P + P AP A +A P S ASP P
Sbjct: 369 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 428
Query: 293 AAAPPRAARGP 303
+ APP A P
Sbjct: 429 SQAPPSLAAPP 439
>gi|38372931 brevican isoform 2 [Homo sapiens]
Length = 671
Score = 42.7 bits (99), Expect = 6e-04
Identities = 51/195 (26%), Positives = 69/195 (35%), Gaps = 19/195 (9%)
Query: 143 WIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSSGA 202
W + LS P P P QA A A L+ P + S+ R P G
Sbjct: 480 WAWPSELSSPGPEASLPTEPAAQEESLSQAPARA-VLQPGASPLPDGESEASRPPRVHGP 538
Query: 203 KRRRLRAALGPQPTRSALRFPSASP-------GSLKAKQSMAGIPGRESN--APSVPTVS 253
L P P L PS S G ++G+P ES S S
Sbjct: 539 PTETL-----PTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGESEETGSSEGAPS 593
Query: 254 LLPG--APGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAARGPTPRTEEAA 311
LLP AP G ++ +G+ +P G S QA P + R P + +A
Sbjct: 594 LLPATRAPEGTRELEAPSEDNSGRTAPAGT--SVQAQPVLPTDSASRGGVAVVPASGNSA 651
Query: 312 WAAMALTFLLVLLTL 326
+ AL+ LL+ L
Sbjct: 652 QGSTALSILLLFFPL 666
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 42.0 bits (97), Expect = 0.001
Identities = 42/137 (30%), Positives = 56/137 (40%), Gaps = 17/137 (12%)
Query: 194 PRQPSSSGAKRRRLRAALG--PQPTRSALRFPSASPGSLKAKQSMAGIPGRESNAPSVPT 251
P P GA R A G P P +AL PG L A + AG PG + A S +
Sbjct: 310 PPPPPPHGAAAELARTAFGYRPHPLGAAL------PGPLPASAAKAGGPGASALARSPFS 363
Query: 252 V-SLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAARGPTPRTEEA 310
+ S++ G+ G A++ AQ + SP+P AA P + G + A
Sbjct: 364 IESIIGGSLGPAAAAAAAAQ--------AAAAAQASPSPSPVAAPPAPGSSGGGCAAQAA 415
Query: 311 AWAAMALTFLLVLLTLA 327
A ALT LV A
Sbjct: 416 VGPAAALTRSLVAAAAA 432
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 41.6 bits (96), Expect = 0.001
Identities = 44/124 (35%), Positives = 58/124 (46%), Gaps = 21/124 (16%)
Query: 218 SALRFPSASPGSLKAKQSMAGIP-GRESNAPSVPTVSLLPGAPGGNAS--SRTEAQVPNG 274
S R PSA G+ A+ S AG P GR S A + P + G P G AS + A P G
Sbjct: 10 SPARTPSA--GASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPG 67
Query: 275 QGSPGGCVCSSQASPA---PRAAAPPRA-------ARGPTPRTEEAAWAAMALTFLLVLL 324
+ SPG +ASPA P A+P RA +R + R+ A A++ + V L
Sbjct: 68 RASPG------RASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYL 121
Query: 325 TLAT 328
AT
Sbjct: 122 VRAT 125
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 41.2 bits (95), Expect = 0.002
Identities = 56/215 (26%), Positives = 78/215 (36%), Gaps = 39/215 (18%)
Query: 132 RRRRKQRKKKAWIYCESLSGPAPSEPTP----GRGRLCRRGCVQALA---LAFALRSWRP 184
+RR K ++++A GP P P G G + RR + L P
Sbjct: 1149 KRRPKAKEREA--------GPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEP 1200
Query: 185 PGTEVTSQGPRQPSSSGAKRRRLRAALGPQP-------------TRSALRFPSASPGSLK 231
P T++ P P G R+ + + P+P T ++ + P PGS +
Sbjct: 1201 PPTDLAHLPPLPPPE-GEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPE 1259
Query: 232 AKQSMAGIPGRESNAPSVPT----VSLLPGAPGGNA----SSRTEAQVPNGQGSPGGCVC 283
K++ P P PT V + G P G+A + Q P P G
Sbjct: 1260 VKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPP 1319
Query: 284 SSQASPA--PRAAAPPRAARGPTPRTEEAAWAAMA 316
S ASPA P AP PR AA AA A
Sbjct: 1320 SLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAA 1354
Score = 33.1 bits (74), Expect = 0.45
Identities = 48/196 (24%), Positives = 70/196 (35%), Gaps = 31/196 (15%)
Query: 137 QRKKKAWIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEV--TSQGP 194
+RK + ++ P P EPTP + + Q L+ L++ EV T++ P
Sbjct: 619 RRKAPQSLEVMAIESPPPPEPTPADCQSPKMTTFQDSELSDELQAAMTGPAEVGPTTEKP 678
Query: 195 ------------RQPSSSGAKRRRLRAAL--------GPQPTRSALRFPSASPGSLKAKQ 234
RQ SS G + R + ++ GP S + G
Sbjct: 679 SSHLPPTPRATTRQDSSLGGRARHMSSSQELLGDGPPGPSSPMSRSQEYLLDEGPAPGTP 738
Query: 235 SMAGIPGRESNAPSVPTVSLLPGAP----GGNASSRTEAQVPNGQGSPGGCVCSSQASPA 290
PGR ++ +V +PG P S T Q P + PG S QA
Sbjct: 739 PREARPGRHGHSIKRASVPPVPGKPRQVLPPGTSHFTPPQTPT-KTRPG----SPQALGG 793
Query: 291 PRAAAPPRAARGPTPR 306
P AP A PTP+
Sbjct: 794 PHGPAPATAKVKPTPQ 809
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 41.2 bits (95), Expect = 0.002
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 213 PQPTRSALRFPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQVP 272
P+P+ S PSA + +A +P + AP+ P AP ++ ++
Sbjct: 238 PRPSLSPAAAPSAPGPAPSQLPGLAALP-LSAGAPAAAIAGSGPAAPAAFEGAQPLSRPE 296
Query: 273 NGQGSPGGCVCSSQASPAPRAAAPPRAARGPTPRTEEAA 311
+G +PGG + ++PA +AAP AA P P + AA
Sbjct: 297 SGASTPGG--PAEPSAPAAPSAAPAPAAPAPAPAPQSAA 333
Score = 30.8 bits (68), Expect = 2.2
Identities = 37/124 (29%), Positives = 47/124 (37%), Gaps = 26/124 (20%)
Query: 148 SLSGPAPSEPTPGRGRLCRRGCVQALALAF-----------ALRSWRPPGTEVTSQGPRQ 196
S GPAPS+ PG L A A+A A RP T GP +
Sbjct: 249 SAPGPAPSQ-LPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGASTPGGPAE 307
Query: 197 PSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLP 256
PS+ A + P P A P+ +P S + Q P S P++ SLL
Sbjct: 308 PSAPAAP------SAAPAPAAPA---PAPAPQSAASSQ-----PQSASTPPALAPGSLLG 353
Query: 257 GAPG 260
APG
Sbjct: 354 AAPG 357
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 40.8 bits (94), Expect = 0.002
Identities = 54/201 (26%), Positives = 74/201 (36%), Gaps = 32/201 (15%)
Query: 126 AHWLMRRRRRKQRKKKAWIYCESLSGPAPS--------EPTPGRGRLC--RRGCVQAL-- 173
A +L+RRR + K I C + P+ + PGRG+ C RR + L
Sbjct: 30 AQFLLRRRGMSKCDK---IMCNDMGTLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRY 86
Query: 174 ----ALAFALRSWRPPGTEVTSQGPRQPSSSGAKRRRLRA--------ALGPQPTRSALR 221
+ L W PP P P + A+R RA A G + TR A R
Sbjct: 87 PPEPGVFPFLVLWTPPFAPGRISPPA-PQAFLAQRSPARASPGGGFTSAEGKRKTRPAGR 145
Query: 222 FPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQ----VPNGQGS 277
+ + A +S A PGR + + S P SSR Q P+ G+
Sbjct: 146 GGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGA 205
Query: 278 PGGCVCSSQASPAPRAAAPPR 298
P + PAPR A R
Sbjct: 206 PSRSTSQATPPPAPRFPASRR 226
Score = 34.7 bits (78), Expect = 0.15
Identities = 48/178 (26%), Positives = 64/178 (35%), Gaps = 32/178 (17%)
Query: 149 LSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEV--TSQGPRQPSSSGAKRRR 206
L+ +P+ +PG G G R RP G T + P S+ A R
Sbjct: 117 LAQRSPARASPGGGFTSAEG----------KRKTRPAGRGGGRTRRVVAAPESAAAAPGR 166
Query: 207 LRAALGPQPTRSALRFPSASPGSLKAKQ------SMAGIPGRESNAPSVP-----TVSLL 255
+ P T SA R P A S +A Q G P R ++ + P S
Sbjct: 167 SPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRR 226
Query: 256 PGAPGGNASSRTEAQVPNGQGSP-----GGCVCSSQASPAPRAAAPPRAARGPTPRTE 308
PGAP SRT + G +P G S + PA +A PP PR +
Sbjct: 227 PGAP--RLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPA--SAKPPPQVLTAEPRED 280
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 40.0 bits (92), Expect = 0.004
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 187 TEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALR--FPSASPGSLKAKQSMAGIPGRES 244
T ++ P +PS++ RA+L P+ ++L P ASP + ++ S+ + S
Sbjct: 271 TASITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTAS 330
Query: 245 NAPSVPTVSLLP----GAPGGNASSRTEAQVPNGQ---GSPGGCVCSSQASPAPRAAAPP 297
+ + P S+ +P G S+ + P+ GSP + +S A PP
Sbjct: 331 ISRTPPRASITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPP 390
Query: 298 RAARGPTPRT 307
RA+ TP T
Sbjct: 391 RASPTGTPST 400
Score = 38.5 bits (88), Expect = 0.011
Identities = 45/181 (24%), Positives = 70/181 (38%), Gaps = 18/181 (9%)
Query: 158 TPGRGRLCRRGCVQALALAFALRSWR--PPGTEVTSQGPR-----QPSSSGAKRRRLRAA 210
+P R L R L ++ S + PP T PR +PS++ R RA+
Sbjct: 70 SPSRASLTRMQSSSLLTRTPSMASLKRMPPRASRTRTLPRASLMRRPSTASLTRSPSRAS 129
Query: 211 LGPQPTRSALRFPSASPGSL--KAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTE 268
L P+R++L ++ +L ++ S+ P R S + T SL P + +
Sbjct: 130 LTTTPSRASLSMTPSTAAALTMPSRASLTRTPPRASLTMTPSTASLTRTPPRASPTGMPS 189
Query: 269 AQVPNGQGSPGGCV-------CSSQASPAPRAAAPPRAARGPTPRTEEAAWAAMALTFLL 321
P G S + S A PPRA+ PT A+ + M T LL
Sbjct: 190 RTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRAS--PTGSPPRASLSMMPSTALL 247
Query: 322 V 322
+
Sbjct: 248 I 248
Score = 35.0 bits (79), Expect = 0.12
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 14/149 (9%)
Query: 158 TPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTR 217
TP R L + ++ + S P T T+ PS++ A RAAL P+R
Sbjct: 496 TPSRASLTKMESTASITRTPSRAS--PTWTPSTASPTGSPSTALAMGSPSRAALTRTPSR 553
Query: 218 SAL-RFPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQG 276
++L R PS + + ++ S+ P +V + P A SRT + G
Sbjct: 554 ASLTRTPSRASLTTPSRASLTRTPS------TVLLTRMPPSASPTGMPSRT-----SPTG 602
Query: 277 SPGGCVCSSQASPAPRAAAPPRAARGPTP 305
P + + S A PPRA+ TP
Sbjct: 603 MPSSALLTKMDSTASITRTPPRASPTETP 631
Score = 35.0 bits (79), Expect = 0.12
Identities = 37/144 (25%), Positives = 54/144 (37%), Gaps = 27/144 (18%)
Query: 184 PPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRF-------------------PS 224
P G+ T+ PS + R RA+L P+R++L PS
Sbjct: 529 PTGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRASLTRTPSTVLLTRMPPS 588
Query: 225 ASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNG---QGSPGGC 281
ASP + ++ S G+P T S+ P + + P G + SP G
Sbjct: 589 ASPTGMPSRTSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRASPTGTPPRASPTG- 647
Query: 282 VCSSQASPAPRAAAPPRAARGPTP 305
+ASP PPRA+ TP
Sbjct: 648 -TPPRASP---TGTPPRASPTGTP 667
Score = 34.7 bits (78), Expect = 0.15
Identities = 40/174 (22%), Positives = 64/174 (36%), Gaps = 18/174 (10%)
Query: 152 PAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSSGAKRRRLRAAL 211
P+ + PT R G +L + P GT + PS++ R+ RA+
Sbjct: 353 PSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLTRKPPRASP 412
Query: 212 GPQPTRSALRF-----------PSASPGSLKAKQSMAGIPGRES----NAPSVPTVSLLP 256
+R+++ P ASP + S G P R S + + PT S
Sbjct: 413 TGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPST 472
Query: 257 GAPGGNASSRTEAQVPNGQG---SPGGCVCSSQASPAPRAAAPPRAARGPTPRT 307
+P G+ S+ + P+ +P + S A P RA+ TP T
Sbjct: 473 ASPTGSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPST 526
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 40.0 bits (92), Expect = 0.004
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 26/128 (20%)
Query: 193 GPRQPSSSGAKRRRLRAALGPQPTRSALRFP-------SASPGSLKAKQSMAGIPGRESN 245
GP PS GA P+ + +A FP +A+P S K + +P
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLP---KG 1055
Query: 246 APSVPTVSLLPGAPGGNASSRTE-------AQVPNGQGSPGGCVCSSQASPAPRAAAPPR 298
AP+ P +L P GG A+ + A P+ +G P A+P+P+ A P
Sbjct: 1056 APTTPAATL-PSPKGGPATPSLKGAPTPPAATPPSPKGGP--------ATPSPKGAPMPP 1106
Query: 299 AARGPTPR 306
AA P+P+
Sbjct: 1107 AATPPSPK 1114
Score = 39.7 bits (91), Expect = 0.005
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 213 PQPTRS-ALRFPSASPGSLKAKQSMAGIPGRES--NAPSVPTVSLLPGAPGGNASSRTEA 269
P P ++ AL S+SP +A + GIP S AP+ P + P +P G ++ +
Sbjct: 903 PAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAAT--PPSPKGGPATPSPK 960
Query: 270 QVPNGQGSPGGCVCSSQASPAPRAAAPPRAARGPTPR 306
P + A+P+P+ A P AA P+P+
Sbjct: 961 WAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK 997
Score = 38.1 bits (87), Expect = 0.014
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 15/123 (12%)
Query: 185 PGTEVTSQGPRQPSSSGAKRRRLRAALGPQ----PTRSALRFPSASPGSLKAKQSMAGIP 240
P T + + P P+++ ++ A L P+ P + P +P K++ A
Sbjct: 1517 PATPSSRRDPIAPTAT-LLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPS 1575
Query: 241 GRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA 300
+E+++P T S GAP S E +P SP S + +P P A PP
Sbjct: 1576 SKEASSPPAVTPSTYKGAP-----SPKELLIPPAVTSP-----SPKEAPTPPAVTPPSPE 1625
Query: 301 RGP 303
+GP
Sbjct: 1626 KGP 1628
Score = 37.7 bits (86), Expect = 0.018
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 184 PPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRE 243
P G T P++ A + P + A P+A+P SLK +A P +
Sbjct: 1228 PKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKG--GLATPPHKG 1285
Query: 244 SNAPSVPTVSLLPGAPGGN----ASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRA 299
+ P+V T G P + A + A P+ +GSPG +P P+ A P A
Sbjct: 1286 APNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPG--------TPPPKGAPTPPA 1337
Query: 300 ARGPTPR 306
P+P+
Sbjct: 1338 VTPPSPK 1344
Score = 36.6 bits (83), Expect = 0.040
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 16/142 (11%)
Query: 185 PGTEVTSQGPRQPSSSGAKRRRLRAALGPQ--PTRSALRFPS-----ASPGSLKAKQSMA 237
P +TS P++ ++ A + + A+ P+ PT A PS A+P A A
Sbjct: 909 PALSMTSSSPKKARATPAPKG-IPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPA 967
Query: 238 GIPGRESNAPSVPTVSLLPGAPGGNASS-RTEAQVPNGQGSPGGCVC-------SSQASP 289
P P+ P+ P P S + P+ +G+P S A+P
Sbjct: 968 ATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP 1027
Query: 290 APRAAAPPRAARGPTPRTEEAA 311
P+ A+ P AA P+P+ AA
Sbjct: 1028 FPKGASTPPAATPPSPKGSPAA 1049
Score = 35.8 bits (81), Expect = 0.069
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 184 PPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLK---AKQSMAGIP 240
P G T P++ A + L P + A P+A+P S K A S G P
Sbjct: 1136 PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAP 1195
Query: 241 GRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA 300
+ P P L +P G + T A P SP G + A+P+P+ A AA
Sbjct: 1196 TTPAATPPSPKGGLATPSPKG--APTTPAATPP---SPKGGL----ATPSPKGAPTTPAA 1246
Query: 301 RGPTPR 306
P+P+
Sbjct: 1247 TPPSPK 1252
Score = 35.4 bits (80), Expect = 0.090
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Query: 192 QGPRQPSSSGAKRRRLRAALGPQP-----TRSALRFPSASPGSLKAKQSMAGIPGRES-- 244
+ P P+ GA L A + P T S+ R P A +L +K++ A + +E+
Sbjct: 1492 KAPATPAPMGAPT--LPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALI 1549
Query: 245 ----------NAPSVPTVSLLPGAPGGNASSRTEAQVPNG-QGSPGG---CVCSSQASPA 290
P++PT P P +S A P+ +G+P + + SP+
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPS 1609
Query: 291 PRAAAPPRAARGPTP 305
P+ A P A P+P
Sbjct: 1610 PKEAPTPPAVTPPSP 1624
Score = 35.0 bits (79), Expect = 0.12
Identities = 34/124 (27%), Positives = 48/124 (38%), Gaps = 12/124 (9%)
Query: 184 PPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLK---AKQSMAGIP 240
P G T P++ A + L + A P+A+P S K A S G P
Sbjct: 1159 PKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1218
Query: 241 GRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA 300
+ P P L +P G A + A P+ +G P A+P P+ A P AA
Sbjct: 1219 TTPAATPPSPKGGLATPSPKG-APTTPAATPPSPKGGP--------ATPPPKGAPTPPAA 1269
Query: 301 RGPT 304
P+
Sbjct: 1270 TPPS 1273
Score = 34.7 bits (78), Expect = 0.15
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 6/123 (4%)
Query: 184 PPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRE 243
P G T P++ A + L P + A P+A+P S K +A P +
Sbjct: 1113 PKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG--GLATPPPK- 1169
Query: 244 SNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAARGP 303
AP+ P + P +P G ++ + P + A+P+P+ A AA P
Sbjct: 1170 -GAPTTPAAT--PPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1226
Query: 304 TPR 306
+P+
Sbjct: 1227 SPK 1229
Score = 33.1 bits (74), Expect = 0.45
Identities = 38/147 (25%), Positives = 50/147 (34%), Gaps = 29/147 (19%)
Query: 183 RPPGTEVTSQGPRQPSSSGAKRRRLRAALGPQP----------TRSALRFPSASPGSLKA 232
+ P T GP PSS G L A P P T S+ + A+P + A
Sbjct: 1445 KAPATSAPKGGPATPSSKGDPT--LPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGA 1502
Query: 233 KQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSR--------TEAQVPNGQGSPGGCVCS 284
A IP P+ P+ P AP S+ EA +P P
Sbjct: 1503 PTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVP------ 1556
Query: 285 SQASPAPRAAAPPRAARGPTPRTEEAA 311
SP A P TP ++EA+
Sbjct: 1557 ---SPKKTPAIPTPKEAPATPSSKEAS 1580
Score = 30.8 bits (68), Expect = 2.2
Identities = 31/133 (23%), Positives = 46/133 (34%), Gaps = 13/133 (9%)
Query: 184 PPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLK----------AK 233
P G T P++ A + L + A P+A+P S K A
Sbjct: 1182 PKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1241
Query: 234 QSMAGIPGRESNAPSVPTVSLLPGAPGGNASS-RTEAQVPNGQGSPGGCVCSSQASPAPR 292
+ A P P+ P P P S + P +G+P V + +
Sbjct: 1242 TTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGP 1301
Query: 293 AAAPPRAARGPTP 305
A +PP+ A PTP
Sbjct: 1302 ATSPPKGA--PTP 1312
Score = 29.3 bits (64), Expect = 6.4
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 27/119 (22%)
Query: 215 PTRSALRFPSASPGSLKAKQSMAGIPGRE--SNAPSVPTVSLLPGAPGGNASSRTEAQVP 272
P + A P+A+P S K G PG AP+ P V+ P +P G + A P
Sbjct: 1305 PPKGAPTPPAATPPSPK------GSPGTPPPKGAPTPPAVT--PPSPKGTPT--LPATTP 1354
Query: 273 NGQGSPGGCVCSSQASPAPRAA-------------APPRAARGPTPRTEEAAWAAMALT 318
+ +G P SS+ P P AA +P R P+P+ + + A + L+
Sbjct: 1355 SSKGGP--TTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLS 1411
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 39.7 bits (91), Expect = 0.005
Identities = 45/176 (25%), Positives = 62/176 (35%), Gaps = 24/176 (13%)
Query: 151 GPAPSEPTPGRGRLCRRGCVQALALAFALRSWR---PPGTEVTSQGP------------- 194
GP P P PG G+ G Q L + AL + P + + GP
Sbjct: 177 GPGPG-PGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPG 235
Query: 195 ---RQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRESNAP-SVP 250
+ P GA AA P + +A P A ++A PG + P + P
Sbjct: 236 TVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAP 295
Query: 251 TVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAARGPTPR 306
V A G ++ A P G P G S Q P AAAP + +P+
Sbjct: 296 AVPPPAAAQNGGSAGAAPAPAP-AAGGPAG--VSGQPGPGAAAAAPAPGVKAESPK 348
Score = 37.7 bits (86), Expect = 0.018
Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Query: 210 ALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTEA 269
A G P A P A+P A ++ G G + P P L+P P A+
Sbjct: 70 AAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLR-- 127
Query: 270 QVPNGQGSPGGCVCSSQASPAPRAAA----PPRAARGPTPRTEEAAWAAMA 316
P +GS G C +P P AAA P A GP AA AA A
Sbjct: 128 --PPPEGSAGSC------APVPAAAAVAAGPEPAPAGPAKPAGPAALAARA 170
Score = 36.2 bits (82), Expect = 0.053
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 186 GTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPS--ASPGSLKAKQSMAGIPGRE 243
G E GP +P+ A R GP P P A PG+ + A +
Sbjct: 149 GPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAAL--LN 206
Query: 244 SNAPSVPTVSLLPGAPGG------NASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPP 297
S+ + P VSL+ P A+ T Q P G+ ++ + PA A A P
Sbjct: 207 SHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAP 266
Query: 298 RAARGPTP 305
AA P P
Sbjct: 267 AAAPPPPP 274
Score = 30.4 bits (67), Expect = 2.9
Identities = 29/107 (27%), Positives = 39/107 (36%), Gaps = 9/107 (8%)
Query: 207 LRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRE--SNAPSVPTVSLLPGAPGGNAS 264
L +L Q SA +P + + + + AG G S +P+ P AP A
Sbjct: 25 LVGSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPA-GAAGAGPAAPAEGAP 83
Query: 265 SRTEAQVPNGQGSPGGCVCSSQASPAPR------AAAPPRAARGPTP 305
P G+ PGG P+PR APP A P P
Sbjct: 84 GAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPP 130
Score = 30.4 bits (67), Expect = 2.9
Identities = 41/156 (26%), Positives = 51/156 (32%), Gaps = 40/156 (25%)
Query: 147 ESLSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSSGAKRRR 206
E G AP P GR R PG GP++P +R
Sbjct: 80 EGAPGAAPEPPPAGRAR---------------------PG----GGGPQRPGPPSPRRPL 114
Query: 207 LRAALGPQPTRSALRFP-SASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASS 265
+ A GP P + LR P S GS + A + AP+ P P G A+
Sbjct: 115 VPA--GPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAG------PAKPAGPAAL 166
Query: 266 RTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAAR 301
A G G G P P A P AA+
Sbjct: 167 AARAGPGPGPGPGPG------PGPGPGKPAGPGAAQ 196
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 39.3 bits (90), Expect = 0.006
Identities = 48/171 (28%), Positives = 60/171 (35%), Gaps = 15/171 (8%)
Query: 151 GPAPSEPTPG-RGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSSGAK-RRRLR 208
GP PG RGR G A PPG + GP P + GAK
Sbjct: 321 GPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPT 380
Query: 209 AALGPQPTRSALRFP----SASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNA- 263
A GP+ + P S P GIPG + +A P ++ PG PG
Sbjct: 381 GARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSA-GAPGIAGAPGFPGPRGP 439
Query: 264 ---SSRTEAQVPNGQ-GSPGGCVCSSQASPAPRAAAPPRAARG-PTPRTEE 309
T P GQ G PG + + P+ P +G P P EE
Sbjct: 440 PGPQGATGPLGPKGQTGEPG--IAGFKGEQGPKGEPGPAGPQGAPGPAGEE 488
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 39.3 bits (90), Expect = 0.006
Identities = 48/171 (28%), Positives = 60/171 (35%), Gaps = 15/171 (8%)
Query: 151 GPAPSEPTPG-RGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSSGAK-RRRLR 208
GP PG RGR G A PPG + GP P + GAK
Sbjct: 252 GPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPT 311
Query: 209 AALGPQPTRSALRFP----SASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNA- 263
A GP+ + P S P GIPG + +A P ++ PG PG
Sbjct: 312 GARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSA-GAPGIAGAPGFPGPRGP 370
Query: 264 ---SSRTEAQVPNGQ-GSPGGCVCSSQASPAPRAAAPPRAARG-PTPRTEE 309
T P GQ G PG + + P+ P +G P P EE
Sbjct: 371 PGPQGATGPLGPKGQTGEPG--IAGFKGEQGPKGEPGPAGPQGAPGPAGEE 419
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 38.5 bits (88), Expect = 0.011
Identities = 50/194 (25%), Positives = 73/194 (37%), Gaps = 32/194 (16%)
Query: 149 LSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSS---GAKRR 205
LSG +P PG R + + SW P E + G SSS G R
Sbjct: 123 LSGGLSPDPKPGGAPTSSRRPL------LSSPSWGGPEPEGRAGGGIPGSSSPHPGTGSR 176
Query: 206 RLRAAL---GPQPTRSALRFPSASPGSLKAKQSMAG--------IPGRESNA---PSVPT 251
RL+ A P+P ++ + + G A ++ + G +S+A SV
Sbjct: 177 RLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSA 236
Query: 252 VSLLPGAPGGNASSRTEAQVPNGQGSPGGC---------VCSSQASPAPRAAAPPRAARG 302
+ A GG +++ T V G G+ G + +S P P A +PP
Sbjct: 237 AATAAAAGGGGSTASTSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLP 296
Query: 303 PTPRTEEAAWAAMA 316
PTP A AA A
Sbjct: 297 PTPSPATAVTAASA 310
>gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo
sapiens]
Length = 368
Score = 38.5 bits (88), Expect = 0.011
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 28/121 (23%)
Query: 186 GTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRESN 245
G E+ SQ + + +R R GP P RS + PS PGS+ + + G P
Sbjct: 213 GKELVSQVSTRRAVHPPTPKRARTGPGPSPLRSGHQVPS--PGSVLSPHMLFGHP----- 265
Query: 246 APSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAARGPTP 305
P A GG S G+GSP + +Q PAP P+ ARG
Sbjct: 266 ----------PSAAGGGDSG--------GEGSPEPLLPPAQGPPAP---PRPQKARGSRS 304
Query: 306 R 306
R
Sbjct: 305 R 305
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 38.5 bits (88), Expect = 0.011
Identities = 45/160 (28%), Positives = 59/160 (36%), Gaps = 21/160 (13%)
Query: 159 PGRGRLC--RRGCVQAL------ALAFALRSWRPPGTEVTSQGPRQPSSSGAKRRRLRA- 209
PGRG+ C RR + L + L W PP P P + A+R RA
Sbjct: 68 PGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPA-PQAFLAQRSPARAS 126
Query: 210 -------ALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGN 262
A G + TR A R + + A +S A PGR + + S P
Sbjct: 127 PGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRAR 186
Query: 263 ASSRTEAQ----VPNGQGSPGGCVCSSQASPAPRAAAPPR 298
SSR Q P+ G+P + PAPR A R
Sbjct: 187 RSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRR 226
Score = 34.7 bits (78), Expect = 0.15
Identities = 48/178 (26%), Positives = 64/178 (35%), Gaps = 32/178 (17%)
Query: 149 LSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEV--TSQGPRQPSSSGAKRRR 206
L+ +P+ +PG G G R RP G T + P S+ A R
Sbjct: 117 LAQRSPARASPGGGFTSAEG----------KRKTRPAGRGGGRTRRVVAAPESAAAAPGR 166
Query: 207 LRAALGPQPTRSALRFPSASPGSLKAKQ------SMAGIPGRESNAPSVP-----TVSLL 255
+ P T SA R P A S +A Q G P R ++ + P S
Sbjct: 167 SPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRR 226
Query: 256 PGAPGGNASSRTEAQVPNGQGSP-----GGCVCSSQASPAPRAAAPPRAARGPTPRTE 308
PGAP SRT + G +P G S + PA +A PP PR +
Sbjct: 227 PGAP--RLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPA--SAKPPPQVLTAEPRED 280
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 38.5 bits (88), Expect = 0.011
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 2/133 (1%)
Query: 146 CESLSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTS-QGPRQPSSSGAKR 204
CE + A R RRG L + SW TEV + G + S + K
Sbjct: 1287 CEVAARAARRPEAVARIPPLRRGAT-TLGVTTPAVSWGDAPTEVVACSGSLKASPTSKKG 1345
Query: 205 RRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNAS 264
+A P+P+ +A P SL+ + S A P N V ++L G S
Sbjct: 1346 LAPKAGFLPRPSGAAPPAPPTRKSSLEQRSSPASAPPHAVNPARVGAAAVLRGEEEPRPS 1405
Query: 265 SRTEAQVPNGQGS 277
SR + VP S
Sbjct: 1406 SRADHSVPRATSS 1418
Score = 33.5 bits (75), Expect = 0.34
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 38/164 (23%)
Query: 185 PGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRES 244
P + PR SS A+ ++ AA S R+ + S K +++ PGR
Sbjct: 1404 PSSRADHSVPRATSSLKARASKVEAAHRLAGHASLERYEGLAHSSSKGREA----PGRPP 1459
Query: 245 NA-------PSVPTVSLLPGAPGGNASSRTEAQVPNGQG--------------------- 276
A PS PT P G A + + P G G
Sbjct: 1460 RAVPKLGVPPSSPTHGPAPACRSGAAKAVGAPKPPVGGGKGRGLVAGGSRALGPSVKLST 1519
Query: 277 ------SPGGCVCSSQASPAPRAAAPPRAARGPTPRTEEAAWAA 314
SPGG V +A+P + +A RG T++A AA
Sbjct: 1520 ASVTGRSPGGPVAGPRAAPRAGPSVGAKAGRGTVMGTKQALRAA 1563
Score = 32.7 bits (73), Expect = 0.58
Identities = 69/275 (25%), Positives = 91/275 (33%), Gaps = 62/275 (22%)
Query: 151 GPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSSGAKRRRLRA- 209
G PS PT G CR G +A+ G +P G K R L A
Sbjct: 1466 GVPPSSPTHGPAPACRSGAAKAV-------------------GAPKPPVGGGKGRGLVAG 1506
Query: 210 ---ALGPQPTRSALRFPSASPG--------------SLKAKQSMAGIPGRES---NAPSV 249
ALGP S SPG S+ AK + G + A S
Sbjct: 1507 GSRALGPSVKLSTASVTGRSPGGPVAGPRAAPRAGPSVGAKAGRGTVMGTKQALRAAHSR 1566
Query: 250 PTVSLLPGAPGGNASSRTEAQVPNGQGS---------PGGCVCSSQASPAPRAAAPPRAA 300
GAPG SS A +G S P G + SP + AP R
Sbjct: 1567 VHELSASGAPGRGGSSWGSADSDSGHDSGVNVGEERPPTG---PALPSPYSKVTAPRRPQ 1623
Query: 301 RGPTPRTEEAAWA-------AMALTFLLVLLTLATLCTRLHRNFRRGESIYWGPTADSQD 353
R + + + AM T L ++ L R+ S P + S+
Sbjct: 1624 RYSSGHGSDNSSVLSGELPPAMGRTALFHHSGGSSGYESLRRDSEATGSASSAPDSMSES 1683
Query: 354 TVAA--VLKRRLLQPSRRVKRSRRRPLLP-PTPDS 385
A+ R L P +R +RR L+P P PD+
Sbjct: 1684 GAASPGARTRSLKSPKKRATGLQRRRLIPAPLPDT 1718
Score = 28.9 bits (63), Expect = 8.4
Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 223 PSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCV 282
PS PG Q+ GR+ + P + G P ++ R + QG+P C
Sbjct: 857 PSGGPGGTDGAQASPARGGRKPSPPEAASPRKAVGTPMAASTPRGSSGPDTHQGTPEPCK 916
Query: 283 C------SSQASPAPRAAAPPRAA----RGPTP 305
+S P P +AA R P P
Sbjct: 917 AIVWGDQREDSSAWPELLVPEKAAVSGGRRPLP 949
>gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Homo
sapiens]
Length = 501
Score = 38.1 bits (87), Expect = 0.014
Identities = 43/131 (32%), Positives = 51/131 (38%), Gaps = 23/131 (17%)
Query: 182 WRPPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSL--------KAK 233
WR G V G SGA R + G QP PSA +L +A
Sbjct: 208 WRDLGDGVVKSGC---GPSGATRPKT----GAQPHPGGCGVPSARSCALGVGQEQLARAA 260
Query: 234 QSMA--GIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAP 291
Q M G GR S P PT GA A+S T ++ P G G P SS+A P
Sbjct: 261 QPMGPLGAAGRSSGKPRQPT-----GAAAAAATS-TWSRGPRGLGIPDQACASSRADPGA 314
Query: 292 RAAAPPRAARG 302
AA +A G
Sbjct: 315 SLAAASQAVCG 325
>gi|50428935 BPY2 interacting protein 1 [Homo sapiens]
Length = 1059
Score = 38.1 bits (87), Expect = 0.014
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 9/133 (6%)
Query: 185 PGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPG-RE 243
PG E ++P+ + A R+ + A P+ + + + + +++ + +P ++
Sbjct: 494 PGQERPGVARKEPARAEAPRKTEKEAKTPRELKKDPKPSVSRTQPREVRRAASSVPNLKK 553
Query: 244 SNAPSVPTVSLLP-----GAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPR 298
+NA + P P G P R+ + G+ SP C S PA + A P
Sbjct: 554 TNAQAAPKPRKAPSTSHSGFPPVANGPRSPPSLRCGEASPPSAACGS---PASQLVATPS 610
Query: 299 AARGPTPRTEEAA 311
GP P EE A
Sbjct: 611 LELGPIPAGEEKA 623
>gi|58331144 proline rich region 18 [Homo sapiens]
Length = 295
Score = 38.1 bits (87), Expect = 0.014
Identities = 54/209 (25%), Positives = 78/209 (37%), Gaps = 25/209 (11%)
Query: 185 PGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRES 244
PG + Q PR+P ++G K++R P L S +LK + G PG +
Sbjct: 14 PGAQAARQLPRRPCAAGDKKKR------PPQRPEGLLSSSWPSATLKRPPARRG-PGLDR 66
Query: 245 NAPSVPTVSLLPGAPGGNASSRTEAQV------PNGQG-SPGGCVCSSQASPAPRAAAPP 297
P P PG SR A P G G SP ++ ++ AA
Sbjct: 67 TQPPAP-----PGVSPQALPSRARAPATCAPPRPAGSGHSPARTTYAATSAGTGTTAAGT 121
Query: 298 RAARGPTPRTEEAAWAAMALTFLLVLLTLATLCTRLHRNFRRGESIYWGPTADSQDTVAA 357
+ GP P + AA + LT VL+ + + R + P+A+ + +A
Sbjct: 122 SSGAGPCP--DSAARFCLNLTPEAVLVIQKRHLEK--QLLARPRRPFPSPSAEPRRLLAP 177
Query: 358 VLKRRLLQPSRRVKRSRRRPLLPPTPDSG 386
L R P R S P PPT G
Sbjct: 178 CLPARAAGPRRGGPAS--DPDAPPTAGQG 204
>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 753
Score = 37.7 bits (86), Expect = 0.018
Identities = 44/144 (30%), Positives = 52/144 (36%), Gaps = 20/144 (13%)
Query: 170 VQALALAFALRSWRPPGT-EVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPG 228
+QA AL + PP T G R S R G QP R PS
Sbjct: 1 MQAAALGTPIA---PPHTCPSQDSGDRVVKSGCGPSGATRPKTGAQPHPRGCRVPSVRSC 57
Query: 229 SLKAKQSMA----------GIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSP 278
+L A Q G GR S P PT GA A+S T ++ P G G P
Sbjct: 58 ALGAGQEQLARAAQPVGPLGAAGRSSGKPRQPT-----GAAAAAATS-TWSRGPRGLGIP 111
Query: 279 GGCVCSSQASPAPRAAAPPRAARG 302
SS+A P AA +A G
Sbjct: 112 DQACASSRADPGASLAAASQAVCG 135
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 37.7 bits (86), Expect = 0.018
Identities = 37/131 (28%), Positives = 50/131 (38%), Gaps = 10/131 (7%)
Query: 186 GTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRESN 245
G+ TS G PSSSGA + G + RF S QS + ++
Sbjct: 794 GSRTTSAGTATPSSSGASGTTPSGSEGISTSGETTRFSSNPSRDSHTTQSTTELLSASAS 853
Query: 246 APSVP-----TVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA 300
++P S++PG S + A P GQ SP S ASP AA R A
Sbjct: 854 HGAIPVSTGMASSIVPGTFHPTLSEASTAGRPTGQSSP----TSPSASP-QETAAISRMA 908
Query: 301 RGPTPRTEEAA 311
+ RT +
Sbjct: 909 QTQRTRTSRGS 919
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 37.4 bits (85), Expect = 0.024
Identities = 37/123 (30%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 184 PPGTEVTSQGPRQPSSSGAKRRRLRAALGPQ-PTRSALRFPSASPGSLKAKQSMAGIPGR 242
PPG S P P +G + LR G Q P + P ++ +G G
Sbjct: 797 PPGPSGISGPPGPPGPAG--KEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGT 854
Query: 243 ESNAPSVPTVSLLPGAPG--GNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA 300
+ P P L GAPG G SR E +P G+ G P P A P A
Sbjct: 855 -AGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVG--------EPGPLGIAGPPGA 905
Query: 301 RGP 303
RGP
Sbjct: 906 RGP 908
Score = 35.8 bits (81), Expect = 0.069
Identities = 38/128 (29%), Positives = 51/128 (39%), Gaps = 18/128 (14%)
Query: 184 PPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPG--SLKAKQSMAGIPG 241
PPG P +P G R +GPQ R P PG ++ + G+ G
Sbjct: 137 PPGKAGEDGHPGKPGRPGE-----RGVVGPQGARGFPGTPGL-PGFKGIRGHNGLDGLKG 190
Query: 242 RESNAPSVPTVSLLPGAPGGNAS-SRTEAQVPNGQ----GSPGGC-VCSSQASPAPRAAA 295
+ P P V PGAPG N + +T A+ G+ G+PG S S P A
Sbjct: 191 Q----PGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPA 246
Query: 296 PPRAARGP 303
P + GP
Sbjct: 247 GPIGSAGP 254
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 37.4 bits (85), Expect = 0.024
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 11/123 (8%)
Query: 185 PGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRES 244
PG P +P G + +GP+ R A P A L+ + GIPG+
Sbjct: 958 PGRAGPMGEPGRPGQGGLEGPS--GPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQ-- 1013
Query: 245 NAPSVPTVSL--LPGAPG--GNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA 300
P P + LPG PG G +P G PG C SQ + AA P
Sbjct: 1014 --PGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQC-DPSQCAYFASLAARPGNV 1070
Query: 301 RGP 303
+GP
Sbjct: 1071 KGP 1073
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 37.4 bits (85), Expect = 0.024
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 194 PRQPSSSGAKRRRLRAALGPQPTRSALRFPS---------ASPGSLKAKQSMAGIPGRES 244
P +P S+ + L + GP + FP SPG + + G P
Sbjct: 381 PERPPSA---QDGLGSTRGPPSSLPQRHFPGQAYRASGVDTSPGPPDTELAAPGPPPARL 437
Query: 245 NAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAARGP 303
PT + P PGG ++ T + NGQ SPG +C Q++P P P A P
Sbjct: 438 PQLWDPTAAPYPTPPGGPLAA-TRSMFFNGQPSPGQRLCLPQSAPLPWPQVLPTARPSP 495
Score = 29.3 bits (64), Expect = 6.4
Identities = 47/193 (24%), Positives = 66/193 (34%), Gaps = 48/193 (24%)
Query: 136 KQRKKKAWIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFA----------------- 178
K + +A + + + P PS P+P R L ALAL A
Sbjct: 2010 KCKGSRAAMSLQEEAEPTPSPPSPNRESL-------ALALTAAHSRSGSEGRTPERASSP 2062
Query: 179 ------LRSWRPPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASP----G 228
L + P V PS + A + +LGP P L PS + G
Sbjct: 2063 GLNKPLLATGDSPAPSVGDLAACAPSPTSAAH--MPCSLGPLPREDPLTSPSRAQGGLGG 2120
Query: 229 SLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQ-----VPNGQGSP----- 278
L A S PG + P + L A G A++ T A+ P+ SP
Sbjct: 2121 QLPASPSCRDPPGPQQLLACSPAWAPLEEADGVQATTDTGAEDSPVAPPSLTTSPCDPKE 2180
Query: 279 --GGCVCSSQASP 289
GC+ + SP
Sbjct: 2181 ALAGCLLQGEGSP 2193
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 37.4 bits (85), Expect = 0.024
Identities = 49/191 (25%), Positives = 74/191 (38%), Gaps = 27/191 (14%)
Query: 140 KKAWIYCES-LSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPS 198
+ AW+ + S PAP+ P P V L L E + + P+
Sbjct: 59 RPAWVPGSAETSAPAPA-PAPAPAPAVTGSTVVVLTL------------EASPEAPKPQL 105
Query: 199 SSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGA 258
SG + A G + +R AL + SP + +A+ S A PG + P+ PGA
Sbjct: 106 PSGPESPEPAAVAGVETSR-ALAAGADSPKTEEARPSPAPGPGTPTGTPTRTPSRTAPGA 164
Query: 259 ----------PGGNASSRTEAQVPNGQGSPG-GCVCSSQASPAPRAAAPPRAARGPTPRT 307
PG +S A+ +GQ + G G ++ AS P GP+ T
Sbjct: 165 LTAKPPLAPKPGTTVASGVTARSASGQVTGGHGAAAATSASAGQAPEDPSGPGTGPS-GT 223
Query: 308 EEAAWAAMALT 318
EA A + +T
Sbjct: 224 CEAPVAVVTVT 234
Score = 29.3 bits (64), Expect = 6.4
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 223 PSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSPG--- 279
P +P + P R S A P V + PG P A+S V G+ P
Sbjct: 7 PLVAPPRRHGAPAAPSPPPRGSRAG--PVVVVAPGPPVTTATSAPVTLVAPGEARPAWVP 64
Query: 280 GCVCSSQASPAPRAAAPPRAARGPT 304
G +S +PAP A AP A G T
Sbjct: 65 GSAETSAPAPAP-APAPAPAVTGST 88
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 37.4 bits (85), Expect = 0.024
Identities = 37/143 (25%), Positives = 44/143 (30%), Gaps = 31/143 (21%)
Query: 184 PPGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIP--- 240
PP QGP P GP P R P + PG + G P
Sbjct: 61 PPQGGNKPQGPPPPGKPQ----------GPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGP 110
Query: 241 ----GRESNAPSVPTVSLLPGAPGGNASSRTEAQVPNGQGSP--------------GGCV 282
G + P P P A GG+ S + QG P GG
Sbjct: 111 PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNP 170
Query: 283 CSSQASPAPRAAAPPRAARGPTP 305
QA PA + PPR +G P
Sbjct: 171 QQPQAPPAGQPQGPPRPPQGGRP 193
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 37.4 bits (85), Expect = 0.024
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 11/123 (8%)
Query: 185 PGTEVTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMAGIPGRES 244
PG P +P G + +GP+ R A P A L+ + GIPG+
Sbjct: 1511 PGRAGPMGEPGRPGQGGLEGPS--GPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQ-- 1566
Query: 245 NAPSVPTVSL--LPGAPG--GNASSRTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAA 300
P P + LPG PG G +P G PG C SQ + AA P
Sbjct: 1567 --PGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQC-DPSQCAYFASLAARPGNV 1623
Query: 301 RGP 303
+GP
Sbjct: 1624 KGP 1626
>gi|49472835 bridging integrator 2 [Homo sapiens]
Length = 565
Score = 37.4 bits (85), Expect = 0.024
Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 150 SGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSSGAK---RRR 206
+GPA ++P+P R ++ + PG ++ G QPSSS + R R
Sbjct: 341 NGPAQAQPSPTTER------AKSQEEVLPSSTTPSPGGALSPSG--QPSSSATEVVLRTR 392
Query: 207 LRAALGPQPT-RSALRFPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASS 265
+ QP R++++ SA P ++ A N PS PT S GG + +
Sbjct: 393 TASEGSEQPKKRASIQRTSAPPSRPPPPRATASPRPSSGNIPSSPTAS------GGGSPT 446
Query: 266 RTEAQVPNGQGSPGGCVCSSQASPAPRAAAPPRAARGPTPRTEE 309
A + G SP S + SP P P + R P + E
Sbjct: 447 SPRASLGTGTASPR---TSLEVSPNPE--PPEKPVRTPEAKENE 485
>gi|239758067 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 468
Score = 37.0 bits (84), Expect = 0.031
Identities = 44/155 (28%), Positives = 53/155 (34%), Gaps = 18/155 (11%)
Query: 152 PAPSEP-TPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGPRQPSSSGAKRRRLRAA 210
PA P +PG R VQ A A R PG ++ R+P + A L
Sbjct: 327 PAAETPGSPGAHPAAGRRAVQTSAPAPGATG-RAPGCLASAPAMRRPLGAQAGEVELPRL 385
Query: 211 LGPQPTRSALRFPSASPGSLKAKQSMAGIPGRESNAPSVPTVSLLPGAPGGNASSRTEAQ 270
L P P R P SP A PG+ + V+LL A
Sbjct: 386 LVPTPPRRP-GDPGPSPN--------ADSPGKRVGQAHLCPVALLERAQAVPPRKGPAGC 436
Query: 271 VPNGQGSPGGCVCSSQASPAPRAAAPPRAARGPTP 305
P G G PG C C+ A P A R P P
Sbjct: 437 HPAGPGPPGMCPCA-------EATEEPEAGRAPLP 464
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,726,088
Number of Sequences: 37866
Number of extensions: 1209124
Number of successful extensions: 8851
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 659
Number of HSP's that attempted gapping in prelim test: 7745
Number of HSP's gapped (non-prelim): 1707
length of query: 393
length of database: 18,247,518
effective HSP length: 104
effective length of query: 289
effective length of database: 14,309,454
effective search space: 4135432206
effective search space used: 4135432206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.