Guide to the Human Genome
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Name: TBC1D10B Sequence: fasta or formatted (808aa) NCBI GI: 167614488
Description:

TBC1 domain family, member 10B

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         89           4
 C cysteine            1.1          9           1
 D aspartate           3.2         26           2
 E glutamate           7.8         63           2
 F phenylalanine       2.1         17           2
 G glycine             8.4         68           2
 H histidine           1.7         14           1
 I isoleucine          2.0         16           2
 K lysine              5.2         42           2
 L leucine             8.4         68           2
 M methionine          1.6         13           1
 N asparagine          1.1          9           1
 P proline            11.0         89           4
 Q glutamine           5.1         41           2
 R arginine            7.8         63           3
 S serine              8.3         67           3
 T threonine           5.4         44           2
 V valine              5.4         44           4
 W tryptophan          1.4         11           1
 Y tyrosine            1.9         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TBC1 domain family, member 10B 
TBC1D10A              0.342   TBC1 domain family, member 10A 
TBC1D10C              0.232   TBC1 domain family, member 10C 
EVI5L                 0.075   ecotropic viral integration site 5-like isoform 1 [...
EVI5L                 0.075   ecotropic viral integration site 5-like isoform 2 [H...
RABGAP1L              0.075   RAB GTPase activating protein 1-like isoform A [Homo...
USP6NL                0.073   USP6 N-terminal like isoform 1 
USP6NL                0.073   USP6 N-terminal like isoform 2 
GRTP1                 0.071   growth hormone regulated TBC protein 1 
RABGAP1               0.070   RAB GTPase activating protein 1 
TBC1D9                0.068   TBC1 domain family, member 9 (with GRAM domain) [Ho...
EVI5                  0.065   ecotropic viral integration site 5 
TBC1D9B               0.063   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D9B               0.063   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D8B               0.060   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D2B               0.060   TBC1 domain family, member 2B isoform a 
TBC1D2B               0.060   TBC1 domain family, member 2B isoform b 
SGSM3                 0.060   small G protein signaling modulator 3 
TBC1D4                0.059   TBC1 domain family, member 4 
TBC1D1                0.059   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
TBC1D8                0.058   TBC1 domain family, member 8 
TBC1D2                0.053   TBC1 domain family, member 2 
TBC1D3F               0.052   TBC1 domain family, member 3F 
TBC1D3H               0.051   TBC1 domain family, member 3H 
USP6                  0.051   ubiquitin specific protease 6 
TBC1D3G               0.051   TBC1 domain family, member 3G 
TBC1D3                0.051   TBC1 domain family, member 3 
TBC1D3E               0.051   TBC1 domain family, member 3E 
TBC1D3D               0.050   TBC1 domain family, member 3D 
TBC1D3C               0.050   TBC1 domain family member 3C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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