Guide to the Human Genome
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Name: BIN2 Sequence: fasta or formatted (565aa) NCBI GI: 49472835
Description:

bridging integrator 2

Referenced in:

Myc and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         47           2
 C cysteine            0.5          3           1
 D aspartate           3.2         18           1
 E glutamate          12.4         70           4
 F phenylalanine       1.9         11           1
 G glycine             4.4         25           3
 H histidine           1.4          8           2
 I isoleucine          2.8         16           1
 K lysine              7.4         42           3
 L leucine             7.4         42           2
 M methionine          1.4          8           1
 N asparagine          4.8         27           3
 P proline             7.8         44           4
 Q glutamine           5.3         30           3
 R arginine            4.4         25           2
 S serine             12.9         73           4
 T threonine           5.7         32           2
 V valine              5.5         31           2
 W tryptophan          0.5          3           1
 Y tyrosine            1.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bridging integrator 2 
BIN1                  0.283   bridging integrator 1 isoform 5 
BIN1                  0.271   bridging integrator 1 isoform 7 
BIN1                  0.269   bridging integrator 1 isoform 6 
BIN1                  0.269   bridging integrator 1 isoform 2 
BIN1                  0.268   bridging integrator 1 isoform 4 
BIN1                  0.267   bridging integrator 1 isoform 1 
BIN1                  0.265   bridging integrator 1 isoform 9 
BIN1                  0.262   bridging integrator 1 isoform 10 
BIN1                  0.262   bridging integrator 1 isoform 8 
AMPH                  0.256   amphiphysin isoform 1 
BIN1                  0.256   bridging integrator 1 isoform 3 
AMPH                  0.251   amphiphysin isoform 2 
SRRM1                 0.043   serine/arginine repetitive matrix 1 
NEFM                  0.039   neurofilament, medium polypeptide 150kDa isoform 1 ...
BIN3                  0.034   bridging integrator 3 
SETD1A                0.034   SET domain containing 1A 
PRG4                  0.034   proteoglycan 4 isoform B 
PRG4                  0.034   proteoglycan 4 isoform A 
PRG4                  0.033   proteoglycan 4 isoform D 
PRG4                  0.033   proteoglycan 4 isoform C 
MUC2                  0.032   mucin 2 precursor 
NEFH                  0.032   neurofilament, heavy polypeptide 200kDa 
RP1L1                 0.031   retinitis pigmentosa 1-like 1 
MED15                 0.031   mediator complex subunit 15 isoform b 
NACA                  0.031   nascent polypeptide-associated complex alpha subuni...
DNMBP                 0.030   dynamin binding protein 
LOC100294236          0.029   PREDICTED: similar to diffuse panbronchiolitis crit...
MAGEE1                0.029   melanoma antigen family E, 1 
LOC100128719          0.028   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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