SSBP3 13853

Name: SSBP3	Sequence: fasta or formatted (388aa)		NCBI GI: 21955170
Description: single stranded DNA binding protein 3 isoform a		Referenced in: Additional Genes in Development
Other entries for this name: alt prot [368aa] single stranded DNA binding protein 3 isoform b alt prot [361aa] single stranded DNA binding protein 3 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 20 4 C cysteine 0.8 3 1 D aspartate 3.6 14 2 E glutamate 2.6 10 1 F phenylalanine 2.8 11 2 G glycine 15.2 59 4 H histidine 2.8 11 2 I isoleucine 3.4 13 1 K lysine 1.8 7 1 L leucine 4.1 16 2 M methionine 6.2 24 2 N asparagine 6.7 26 2 P proline 17.8 69 3 Q glutamine 3.6 14 2 R arginine 3.6 14 2 S serine 10.6 41 4 T threonine 2.8 11 1 V valine 2.3 9 1 W tryptophan 1.3 5 2 Y tyrosine 2.8 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 single stranded DNA binding protein 3 isoform a [Hom... SSBP3 0.932 single stranded DNA binding protein 3 isoform b [Hom... SSBP3 0.907 single stranded DNA binding protein 3 isoform c [Hom... SSBP2 0.748 single-stranded DNA binding protein 2 SSBP4 0.709 single stranded DNA binding protein 4 isoform a [Hom... SSBP4 0.653 single stranded DNA binding protein 4 isoform b [Hom... PRB2 0.100 proline-rich protein BstNI subfamily 2 PRB1 0.082 proline-rich protein BstNI subfamily 1 isoform 1 pre... COL3A1 0.076 collagen type III alpha 1 preproprotein PRB3 0.076 proline-rich protein BstNI subfamily 3 precursor [H... COL1A1 0.074 alpha 1 type I collagen preproprotein WDR33 0.072 WD repeat domain 33 isoform 1 COL5A1 0.072 alpha 1 type V collagen preproprotein COL11A2 0.072 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.072 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.072 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL4A5 0.071 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.069 type IV collagen alpha 5 isoform 2 precursor COL10A1 0.069 type X collagen alpha 1 precursor COL17A1 0.068 alpha 1 type XVII collagen COL4A5 0.067 type IV collagen alpha 5 isoform 1 precursor COL8A2 0.066 collagen, type VIII, alpha 2 COL5A2 0.066 alpha 2 type V collagen preproprotein SF3A2 0.065 splicing factor 3a, subunit 2 COL2A1 0.063 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.063 collagen, type II, alpha 1 isoform 2 precursor [Hom... LOC100293055 0.062 PREDICTED: similar to COL22A1 protein COL16A1 0.062 alpha 1 type XVI collagen precursor COL5A3 0.061 collagen, type V, alpha 3 preproprotein COL7A1 0.061 alpha 1 type VII collagen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.