Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: APLP2 Sequence: fasta or formatted (695aa) NCBI GI: 214010183
Description:

amyloid beta (A4) precursor-like protein 2 isoform 3

Referenced in:

Additional Brain Proteins

Other entries for this name:
alt prot [751aa] amyloid beta (A4) precursor-like protein 2 isoform 2
alt prot [522aa] amyloid beta (A4) precursor-like protein 2 isoform 4
alt prot [763aa] amyloid beta (A4) precursor-like protein 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         53           5
 C cysteine            1.7         12           2
 D aspartate           6.0         42           2
 E glutamate          13.7         95           7
 F phenylalanine       3.0         21           2
 G glycine             4.6         32           2
 H histidine           3.2         22           1
 I isoleucine          4.2         29           2
 K lysine              5.3         37           2
 L leucine             8.2         57           6
 M methionine          3.2         22           1
 N asparagine          3.6         25           1
 P proline             4.7         33           2
 Q glutamine           5.2         36           2
 R arginine            4.9         34           3
 S serine              4.3         30           3
 T threonine           5.2         36           1
 V valine              7.6         53           2
 W tryptophan          0.6          4           1
 Y tyrosine            3.2         22           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amyloid beta (A4) precursor-like protein 2 isoform ... 
APLP2                 0.906   amyloid beta (A4) precursor-like protein 2 isoform ...
APLP2                 0.900   amyloid beta (A4) precursor-like protein 2 isoform 1 ...
APLP2                 0.538   amyloid beta (A4) precursor-like protein 2 isoform ...
APP                   0.467   amyloid beta A4 protein isoform c precursor 
APP                   0.448   amyloid beta A4 protein isoform b precursor 
APP                   0.448   amyloid beta A4 protein isoform a precursor 
APP                   0.405   amyloid beta A4 protein isoform e precursor 
APP                   0.386   amyloid beta A4 protein isoform f precursor 
APLP1                 0.326   amyloid precursor-like protein 1 isoform 2 precursor ...
APLP1                 0.325   amyloid precursor-like protein 1 isoform 1 precursor...
VPRBP                 0.025   HIV-1 Vpr binding protein 
PELP1                 0.025   proline, glutamic acid and leucine rich protein 1 [...
BOD1L                 0.025   biorientation of chromosomes in cell division 1-like...
MYT1                  0.024   myelin transcription factor 1 
DAXX                  0.023   death-domain associated protein isoform a 
DAXX                  0.023   death-domain associated protein isoform a 
DAXX                  0.023   death-domain associated protein isoform b 
CALD1                 0.023   caldesmon 1 isoform 1 
BAZ2B                 0.023   bromodomain adjacent to zinc finger domain, 2B [Homo...
CDC2L2                0.021   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.021   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
FAM184A               0.021   hypothetical protein LOC79632 isoform 2 
FAM184A               0.021   hypothetical protein LOC79632 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press