Guide to the Human Genome
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Name: FAM184A Sequence: fasta or formatted (1140aa) NCBI GI: 154350226
Description:

hypothetical protein LOC79632 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {971aa} hypothetical protein LOC79632 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         82           3
 C cysteine            0.4          4           1
 D aspartate           4.6         52           2
 E glutamate          14.4        164           3
 F phenylalanine       2.1         24           1
 G glycine             2.3         26           2
 H histidine           3.8         43           2
 I isoleucine          4.1         47           2
 K lysine              9.5        108           3
 L leucine            12.7        145           2
 M methionine          2.7         31           1
 N asparagine          4.1         47           2
 P proline             1.9         22           2
 Q glutamine           9.5        108           3
 R arginine            5.7         65           2
 S serine              6.5         74           2
 T threonine           3.6         41           1
 V valine              3.4         39           1
 W tryptophan          0.4          5           1
 Y tyrosine            1.1         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79632 isoform 1 
FAM184A               0.833   hypothetical protein LOC79632 isoform 2 
FAM184B               0.162   hypothetical protein LOC27146 
CENPE                 0.069   centromere protein E 
MYH10                 0.067   myosin, heavy polypeptide 10, non-muscle 
CLIP1                 0.065   restin isoform b 
MYH9                  0.062   myosin, heavy polypeptide 9, non-muscle 
GOLGA4                0.062   golgi autoantigen, golgin subfamily a, 4 
CEP250                0.059   centrosomal protein 2 
CLIP1                 0.059   restin isoform a 
EEA1                  0.059   early endosome antigen 1, 162kD 
MYH8                  0.059   myosin, heavy chain 8, skeletal muscle, perinatal [...
CEP110                0.059   centrosomal protein 110kDa 
MYH11                 0.059   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.059   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.059   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.059   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH13                 0.057   myosin, heavy polypeptide 13, skeletal muscle [Homo...
TCHH                  0.057   trichohyalin 
PLEC1                 0.057   plectin 1 isoform 11 
PLEC1                 0.057   plectin 1 isoform 10 
PLEC1                 0.057   plectin 1 isoform 8 
PLEC1                 0.057   plectin 1 isoform 7 
PLEC1                 0.057   plectin 1 isoform 6 
PLEC1                 0.057   plectin 1 isoform 3 
PLEC1                 0.057   plectin 1 isoform 2 
PLEC1                 0.057   plectin 1 isoform 1 
MYH7                  0.056   myosin, heavy chain 7, cardiac muscle, beta 
GOLGB1                0.056   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH2                  0.056   myosin, heavy chain 2, skeletal muscle, adult [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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