APP 12481

Name: APP	Sequence: fasta or formatted (639aa)		NCBI GI: 209915570
Description: amyloid beta A4 protein isoform e precursor		Referenced in: Ankyrin Family Additional Brain Proteins PDZ Domain
Other entries for this name: alt prot [714aa] amyloid beta A4 protein isoform f precursor alt prot [751aa] amyloid beta A4 protein isoform b precursor alt prot [695aa] amyloid beta A4 protein isoform c precursor alt prot [770aa] amyloid beta A4 protein isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 54 2 C cysteine 1.4 9 2 D aspartate 6.7 43 3 E glutamate 12.8 82 4 F phenylalanine 2.5 16 2 G glycine 3.9 25 2 H histidine 3.8 24 2 I isoleucine 3.1 20 2 K lysine 5.5 35 3 L leucine 7.5 48 4 M methionine 2.8 18 1 N asparagine 3.8 24 1 P proline 4.4 28 2 Q glutamine 4.5 29 2 R arginine 5.0 32 3 S serine 4.4 28 1 T threonine 6.4 41 7 V valine 9.4 60 2 W tryptophan 1.1 7 2 Y tyrosine 2.5 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 amyloid beta A4 protein isoform e precursor APP 0.974 amyloid beta A4 protein isoform c precursor APP 0.921 amyloid beta A4 protein isoform b precursor APP 0.903 amyloid beta A4 protein isoform f precursor APP 0.876 amyloid beta A4 protein isoform a precursor APLP2 0.441 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.418 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.417 amyloid beta (A4) precursor-like protein 2 isoform 1 ... APLP1 0.293 amyloid precursor-like protein 1 isoform 1 precursor... APLP1 0.291 amyloid precursor-like protein 1 isoform 2 precursor ... APLP2 0.284 amyloid beta (A4) precursor-like protein 2 isoform ... MYT1 0.027 myelin transcription factor 1 MYT1L 0.025 myelin transcription factor 1-like NCL 0.023 nucleolin EIF5B 0.023 eukaryotic translation initiation factor 5B SETD1B 0.022 SET domain containing 1B TNNT2 0.021 troponin T type 2, cardiac isoform 1 NOM1 0.021 nucleolar protein with MIF4G domain 1 BOD1L 0.021 biorientation of chromosomes in cell division 1-like... CNGB1 0.020 cyclic nucleotide gated channel beta 1 isoform a [H... TNNT2 0.020 troponin T type 2, cardiac isoform 4 CALR 0.020 calreticulin precursor ANP32B 0.020 acidic (leucine-rich) nuclear phosphoprotein 32 famil... KIF21A 0.019 kinesin family member 21A NEFL 0.018 neurofilament, light polypeptide 68kDa LOC647020 0.018 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.018 PREDICTED: similar to acidic (leucine-rich) nuclear... YTHDC1 0.018 splicing factor YT521-B isoform 2 YTHDC1 0.018 splicing factor YT521-B isoform 1 UBTF 0.017 upstream binding transcription factor, RNA polymera... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.