Name: APP | Sequence: fasta or formatted (751aa) | NCBI GI: 41406055 | |
Description: amyloid beta A4 protein isoform b precursor
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Referenced in: Ankyrin Family
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Other entries for this name:
alt prot [639aa] amyloid beta A4 protein isoform e precursor alt prot [714aa] amyloid beta A4 protein isoform f precursor alt prot [695aa] amyloid beta A4 protein isoform c precursor alt prot [770aa] amyloid beta A4 protein isoform a precursor | |||
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.3 62 2 C cysteine 2.4 18 2 D aspartate 6.5 49 3 E glutamate 12.1 91 4 F phenylalanine 2.8 21 2 G glycine 5.1 38 2 H histidine 3.3 25 2 I isoleucine 3.3 25 2 K lysine 5.2 39 3 L leucine 6.9 52 4 M methionine 3.1 23 1 N asparagine 4.1 31 2 P proline 4.4 33 2 Q glutamine 4.5 34 2 R arginine 4.8 36 3 S serine 4.4 33 1 T threonine 6.4 48 7 V valine 8.5 64 2 W tryptophan 1.2 9 2 Y tyrosine 2.7 20 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 amyloid beta A4 protein isoform b precursor APP 0.992 amyloid beta A4 protein isoform a precursor APP 0.890 amyloid beta A4 protein isoform f precursor APP 0.873 amyloid beta A4 protein isoform c precursor APP 0.772 amyloid beta A4 protein isoform e precursor APLP2 0.486 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.485 amyloid beta (A4) precursor-like protein 2 isoform 1 ... APLP2 0.409 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.238 amyloid beta (A4) precursor-like protein 2 isoform ... APLP1 0.222 amyloid precursor-like protein 1 isoform 1 precursor... APLP1 0.220 amyloid precursor-like protein 1 isoform 2 precursor ... SPINT2 0.031 serine protease inhibitor, Kunitz type, 2 COL6A3 0.028 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.028 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.028 alpha 3 type VI collagen isoform 4 precursor SPINT3 0.028 serine protease inhibitor, Kunitz type, 3 SPINT1 0.026 serine peptidase inhibitor, Kunitz type 1 isoform 1 ... SPINT1 0.025 serine peptidase inhibitor, Kunitz type 1 isoform 2 ... SPINT1 0.025 serine peptidase inhibitor, Kunitz type 1 isoform 2 p... COL28A1 0.025 collagen, type XXVIII precursor SPINLW1 0.025 serine peptidase inhibitor-like, with Kunitz and WAP... SPINLW1 0.025 serine peptidase inhibitor-like, with Kunitz and WAP... PAPLN 0.025 papilin AMBP 0.024 alpha-1-microglobulin/bikunin preproprotein TFPI 0.024 tissue factor pathway inhibitor isoform b precursor ... TFPI 0.024 tissue factor pathway inhibitor isoform a precursor [... COL7A1 0.023 alpha 1 type VII collagen precursor TFPI2 0.023 tissue factor pathway inhibitor 2 WFIKKN2 0.023 WFIKKN2 protein MYT1L 0.021 myelin transcription factor 1-likeHuman BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.