APP 12482

Name: APP	Sequence: fasta or formatted (714aa)		NCBI GI: 209915573
Description: amyloid beta A4 protein isoform f precursor		Referenced in: Ankyrin Family Additional Brain Proteins PDZ Domain
Other entries for this name: alt prot [639aa] amyloid beta A4 protein isoform e precursor alt prot [751aa] amyloid beta A4 protein isoform b precursor alt prot [695aa] amyloid beta A4 protein isoform c precursor alt prot [770aa] amyloid beta A4 protein isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 60 2 C cysteine 2.1 15 2 D aspartate 6.4 46 3 E glutamate 12.5 89 4 F phenylalanine 2.8 20 2 G glycine 4.5 32 2 H histidine 3.4 24 2 I isoleucine 2.9 21 2 K lysine 5.3 38 3 L leucine 7.3 52 4 M methionine 2.9 21 1 N asparagine 3.8 27 2 P proline 4.5 32 2 Q glutamine 4.5 32 2 R arginine 5.0 36 3 S serine 4.6 33 1 T threonine 6.4 46 7 V valine 8.8 63 2 W tryptophan 1.1 8 2 Y tyrosine 2.7 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 amyloid beta A4 protein isoform f precursor APP 0.976 amyloid beta A4 protein isoform a precursor APP 0.942 amyloid beta A4 protein isoform b precursor APP 0.800 amyloid beta A4 protein isoform e precursor APP 0.777 amyloid beta A4 protein isoform c precursor APLP2 0.447 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.446 amyloid beta (A4) precursor-like protein 2 isoform 1 ... APLP2 0.373 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.251 amyloid beta (A4) precursor-like protein 2 isoform ... APLP1 0.163 amyloid precursor-like protein 1 isoform 1 precursor... APLP1 0.161 amyloid precursor-like protein 1 isoform 2 precursor ... SPINT2 0.033 serine protease inhibitor, Kunitz type, 2 COL6A3 0.030 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.030 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.030 alpha 3 type VI collagen isoform 4 precursor SPINT3 0.030 serine protease inhibitor, Kunitz type, 3 SPINT1 0.029 serine peptidase inhibitor, Kunitz type 1 isoform 2 ... SPINT1 0.029 serine peptidase inhibitor, Kunitz type 1 isoform 2 p... TFPI 0.028 tissue factor pathway inhibitor isoform b precursor ... TFPI 0.028 tissue factor pathway inhibitor isoform a precursor [... SPINT1 0.027 serine peptidase inhibitor, Kunitz type 1 isoform 1 ... COL28A1 0.027 collagen, type XXVIII precursor SPINLW1 0.026 serine peptidase inhibitor-like, with Kunitz and WAP... SPINLW1 0.026 serine peptidase inhibitor-like, with Kunitz and WAP... COL7A1 0.025 alpha 1 type VII collagen precursor AMBP 0.025 alpha-1-microglobulin/bikunin preproprotein TFPI2 0.024 tissue factor pathway inhibitor 2 WFIKKN2 0.024 WFIKKN2 protein PAPLN 0.022 papilin MYT1L 0.022 myelin transcription factor 1-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.