Guide to the Human Genome
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Name: CDC2L1 Sequence: fasta or formatted (748aa) NCBI GI: 16332364
Description:

cell division cycle 2-like 1 (PITSLRE proteins) isoform 5

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [782aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 2
alt prot [526aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 3
alt prot [737aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 4
alt prot [780aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 8
alt prot [771aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 9
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         33           2
 C cysteine            0.4          3           1
 D aspartate           5.5         41           3
 E glutamate          16.8        126          13
 F phenylalanine       2.5         19           1
 G glycine             5.9         44           2
 H histidine           2.9         22           2
 I isoleucine          3.1         23           1
 K lysine              7.8         58           2
 L leucine             7.8         58           3
 M methionine          2.5         19           1
 N asparagine          2.1         16           2
 P proline             5.1         38           2
 Q glutamine           3.5         26           2
 R arginine            9.9         74           2
 S serine              8.6         64           3
 T threonine           3.9         29           3
 V valine              4.1         31           3
 W tryptophan          0.9          7           1
 Y tyrosine            2.3         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle 2-like 1 (PITSLRE proteins) isof... 
CDC2L1                0.997   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.979   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.978   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.974   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.968   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.961   cell division cycle 2-like 2 isoform 4 
CDC2L1                0.696   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDK10                 0.229   cyclin-dependent kinase 10 isoform a 
CDK10                 0.189   cyclin-dependent kinase 10 isoform d 
CDK10                 0.180   cyclin-dependent kinase 10 isoform c 
CDK10                 0.178   cyclin-dependent kinase 10 isoform b 
CDK3                  0.167   cyclin-dependent kinase 3 
CDK2                  0.166   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.155   cell division cycle 2 isoform 1 
CDC2                  0.154   cell division cycle 2 isoform 3 
CDC2L5                0.151   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.151   cell division cycle 2-like 5 isoform 2 
CRKRS                 0.150   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.150   Cdc2-related kinase, arginine/serine-rich isoform 1...
PCTK2                 0.147   PCTAIRE protein kinase 2 
CDK7                  0.146   cyclin-dependent kinase 7 
CDK5                  0.146   cyclin-dependent kinase 5 
PCTK1                 0.145   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.145   PCTAIRE protein kinase 1 isoform 1 
CCRK                  0.142   cell cycle related kinase isoform 3 
LOC100133692          0.142   PREDICTED: similar to cell division cycle 2-like 1 ...
PFTK1                 0.139   PFTAIRE protein kinase 1 
CDK6                  0.138   cyclin-dependent kinase 6 
CDK6                  0.138   cyclin-dependent kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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