APP 27835

Name: APP	Sequence: fasta or formatted (695aa)		NCBI GI: 41406057
Description: amyloid beta A4 protein isoform c precursor		Referenced in: Ankyrin Family Additional Brain Proteins PDZ Domain
Other entries for this name: alt prot [639aa] amyloid beta A4 protein isoform e precursor alt prot [714aa] amyloid beta A4 protein isoform f precursor alt prot [751aa] amyloid beta A4 protein isoform b precursor alt prot [770aa] amyloid beta A4 protein isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 57 2 C cysteine 1.7 12 2 D aspartate 6.8 47 3 E glutamate 12.2 85 4 F phenylalanine 2.4 17 2 G glycine 4.5 31 2 H histidine 3.6 25 2 I isoleucine 3.3 23 2 K lysine 5.5 38 3 L leucine 7.5 52 4 M methionine 3.0 21 1 N asparagine 4.0 28 1 P proline 4.5 31 2 Q glutamine 4.7 33 2 R arginine 4.7 33 3 S serine 4.3 30 1 T threonine 6.5 45 7 V valine 8.9 62 2 W tryptophan 1.2 8 2 Y tyrosine 2.4 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 amyloid beta A4 protein isoform c precursor APP 0.952 amyloid beta A4 protein isoform b precursor APP 0.910 amyloid beta A4 protein isoform a precursor APP 0.889 amyloid beta A4 protein isoform e precursor APP 0.800 amyloid beta A4 protein isoform f precursor APLP2 0.464 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.444 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.442 amyloid beta (A4) precursor-like protein 2 isoform 1 ... APLP1 0.304 amyloid precursor-like protein 1 isoform 1 precursor... APLP1 0.302 amyloid precursor-like protein 1 isoform 2 precursor ... APLP2 0.259 amyloid beta (A4) precursor-like protein 2 isoform ... MYT1 0.025 myelin transcription factor 1 MYT1L 0.023 myelin transcription factor 1-like NCL 0.021 nucleolin EIF5B 0.021 eukaryotic translation initiation factor 5B SETD1B 0.020 SET domain containing 1B TNNT2 0.020 troponin T type 2, cardiac isoform 1 NOM1 0.019 nucleolar protein with MIF4G domain 1 BOD1L 0.019 biorientation of chromosomes in cell division 1-like... CNGB1 0.018 cyclic nucleotide gated channel beta 1 isoform a [H... TNNT2 0.018 troponin T type 2, cardiac isoform 4 CALR 0.018 calreticulin precursor ANP32B 0.018 acidic (leucine-rich) nuclear phosphoprotein 32 famil... KIF21A 0.017 kinesin family member 21A NEFL 0.017 neurofilament, light polypeptide 68kDa LOC647020 0.017 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.017 PREDICTED: similar to acidic (leucine-rich) nuclear... YTHDC1 0.017 splicing factor YT521-B isoform 2 YTHDC1 0.017 splicing factor YT521-B isoform 1 UBTF 0.016 upstream binding transcription factor, RNA polymera... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.