Guide to the Human Genome
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Name: DAXX Sequence: fasta or formatted (740aa) NCBI GI: 215422388
Description:

death-domain associated protein isoform a

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [752aa] death-domain associated protein isoform b
alt mRNA [740aa] death-domain associated protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         56           3
 C cysteine            1.8         13           1
 D aspartate           6.4         47           4
 E glutamate          11.9         88          13
 F phenylalanine       1.6         12           1
 G glycine             5.7         42           2
 H histidine           1.9         14           1
 I isoleucine          3.2         24           2
 K lysine              4.7         35           3
 L leucine             9.7         72           2
 M methionine          1.2          9           1
 N asparagine          3.4         25           2
 P proline             7.6         56           2
 Q glutamine           4.6         34           2
 R arginine            7.0         52           2
 S serine             11.9         88           4
 T threonine           4.2         31           2
 V valine              3.8         28           2
 W tryptophan          0.1          1           1
 Y tyrosine            1.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   death-domain associated protein isoform a 
DAXX                  1.000   death-domain associated protein isoform a 
DAXX                  0.994   death-domain associated protein isoform b 
MYT1L                 0.037   myelin transcription factor 1-like 
MYT1                  0.035   myelin transcription factor 1 
PELP1                 0.033   proline, glutamic acid and leucine rich protein 1 [...
YTHDC1                0.030   splicing factor YT521-B isoform 2 
YTHDC1                0.029   splicing factor YT521-B isoform 1 
PPM1G                 0.028   protein phosphatase 1G 
PPM1G                 0.028   protein phosphatase 1G 
CLSPN                 0.027   claspin 
RANGAP1               0.027   Ran GTPase activating protein 1 
NCL                   0.026   nucleolin 
EIF5B                 0.026   eukaryotic translation initiation factor 5B 
TTBK1                 0.026   tau tubulin kinase 1 
KCTD1                 0.026   potassium channel tetramerisation domain containing...
SETD1B                0.026   SET domain containing 1B 
RPGR                  0.026   retinitis pigmentosa GTPase regulator isoform C [Hom...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
UBTF                  0.026   upstream binding transcription factor, RNA polymera...
UBTF                  0.026   upstream binding transcription factor, RNA polymera...
UBTF                  0.026   upstream binding transcription factor, RNA polymerase...
CDC2L2                0.025   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.025   cell division cycle 2-like 2 isoform 1 
ACIN1                 0.025   apoptotic chromatin condensation inducer 1 
TRIM44                0.024   DIPB protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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