Guide to the Human Genome
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Name: APLP2 Sequence: fasta or formatted (751aa) NCBI GI: 214010181
Description:

amyloid beta (A4) precursor-like protein 2 isoform 2

Referenced in:

Additional Brain Proteins

Other entries for this name:
alt prot [695aa] amyloid beta (A4) precursor-like protein 2 isoform 3
alt prot [522aa] amyloid beta (A4) precursor-like protein 2 isoform 4
alt prot [763aa] amyloid beta (A4) precursor-like protein 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         58           5
 C cysteine            2.4         18           2
 D aspartate           5.9         44           2
 E glutamate          13.0         98           7
 F phenylalanine       3.2         24           2
 G glycine             5.1         38           2
 H histidine           2.9         22           1
 I isoleucine          4.1         31           2
 K lysine              5.3         40           2
 L leucine             7.7         58           6
 M methionine          3.5         26           1
 N asparagine          3.7         28           2
 P proline             4.7         35           2
 Q glutamine           4.9         37           2
 R arginine            5.1         38           3
 S serine              4.4         33           3
 T threonine           4.9         37           1
 V valine              7.5         56           2
 W tryptophan          0.7          5           1
 Y tyrosine            3.3         25           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amyloid beta (A4) precursor-like protein 2 isoform ... 
APLP2                 0.994   amyloid beta (A4) precursor-like protein 2 isoform 1 ...
APLP2                 0.788   amyloid beta (A4) precursor-like protein 2 isoform ...
APLP2                 0.495   amyloid beta (A4) precursor-like protein 2 isoform ...
APP                   0.489   amyloid beta A4 protein isoform b precursor 
APP                   0.482   amyloid beta A4 protein isoform a precursor 
APP                   0.425   amyloid beta A4 protein isoform f precursor 
APP                   0.409   amyloid beta A4 protein isoform c precursor 
APP                   0.353   amyloid beta A4 protein isoform e precursor 
APLP1                 0.185   amyloid precursor-like protein 1 isoform 2 precursor ...
APLP1                 0.184   amyloid precursor-like protein 1 isoform 1 precursor...
SPINT2                0.037   serine protease inhibitor, Kunitz type, 2 
WFIKKN2               0.029   WFIKKN2 protein 
AMBP                  0.026   alpha-1-microglobulin/bikunin preproprotein 
SPINT3                0.026   serine protease inhibitor, Kunitz type, 3 
SPINT1                0.025   serine peptidase inhibitor, Kunitz type 1 isoform 2 ...
SPINT1                0.025   serine peptidase inhibitor, Kunitz type 1 isoform 2 p...
SPINT1                0.025   serine peptidase inhibitor, Kunitz type 1 isoform 1 ...
SPINLW1               0.025   serine peptidase inhibitor-like, with Kunitz and WAP...
SPINLW1               0.025   serine peptidase inhibitor-like, with Kunitz and WAP...
TFPI                  0.025   tissue factor pathway inhibitor isoform b precursor ...
TFPI                  0.025   tissue factor pathway inhibitor isoform a precursor [...
PAPLN                 0.024   papilin 
VPRBP                 0.023   HIV-1 Vpr binding protein 
COL6A3                0.022   alpha 3 type VI collagen isoform 5 precursor 
COL6A3                0.022   alpha 3 type VI collagen isoform 1 precursor 
COL6A3                0.022   alpha 3 type VI collagen isoform 4 precursor 
DAXX                  0.021   death-domain associated protein isoform a 
DAXX                  0.021   death-domain associated protein isoform a 
DAXX                  0.021   death-domain associated protein isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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