Guide to the Human Genome
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Name: CDC2L1 Sequence: fasta or formatted (771aa) NCBI GI: 16332372
Description:

cell division cycle 2-like 1 (PITSLRE proteins) isoform 9

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [782aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 2
alt prot [526aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 3
alt prot [737aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 4
alt prot [748aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 5
alt prot [780aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         33           2
 C cysteine            0.5          4           1
 D aspartate           5.7         44           3
 E glutamate          17.1        132          13
 F phenylalanine       2.5         19           1
 G glycine             5.6         43           2
 H histidine           2.6         20           2
 I isoleucine          3.2         25           1
 K lysine              8.7         67           2
 L leucine             7.9         61           3
 M methionine          2.5         19           1
 N asparagine          2.2         17           2
 P proline             4.9         38           2
 Q glutamine           3.5         27           2
 R arginine            9.5         73           2
 S serine              8.0         62           3
 T threonine           3.9         30           3
 V valine              4.2         32           3
 W tryptophan          1.0          8           1
 Y tyrosine            2.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle 2-like 1 (PITSLRE proteins) isof... 
CDC2L1                0.995   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.991   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.984   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.982   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.949   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.944   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.675   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDK10                 0.222   cyclin-dependent kinase 10 isoform a 
LOC100133692          0.184   PREDICTED: similar to cell division cycle 2-like 1 ...
CDK10                 0.183   cyclin-dependent kinase 10 isoform d 
LOC100294398          0.180   PREDICTED: similar to PITSLRE protein kinase beta S...
CDK10                 0.174   cyclin-dependent kinase 10 isoform c 
CDK10                 0.173   cyclin-dependent kinase 10 isoform b 
CDK3                  0.162   cyclin-dependent kinase 3 
CDK2                  0.161   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.151   cell division cycle 2 isoform 1 
CDC2                  0.149   cell division cycle 2 isoform 3 
CDC2L5                0.147   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.147   cell division cycle 2-like 5 isoform 2 
CRKRS                 0.145   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.145   Cdc2-related kinase, arginine/serine-rich isoform 1...
PCTK2                 0.142   PCTAIRE protein kinase 2 
CDK7                  0.141   cyclin-dependent kinase 7 
CDK5                  0.141   cyclin-dependent kinase 5 
PCTK1                 0.141   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.141   PCTAIRE protein kinase 1 isoform 1 
CCRK                  0.138   cell cycle related kinase isoform 3 
PFTK1                 0.135   PFTAIRE protein kinase 1 
CDK6                  0.134   cyclin-dependent kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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