Guide to the Human Genome
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Name: CDC2L1 Sequence: fasta or formatted (526aa) NCBI GI: 16332360
Description:

cell division cycle 2-like 1 (PITSLRE proteins) isoform 3

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [782aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 2
alt prot [737aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 4
alt prot [748aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 5
alt prot [780aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 8
alt prot [771aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 9
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         24           2
 C cysteine            0.6          3           1
 D aspartate           4.9         26           3
 E glutamate          16.0         84          13
 F phenylalanine       3.4         18           1
 G glycine             7.2         38           2
 H histidine           1.9         10           1
 I isoleucine          3.8         20           1
 K lysine              6.5         34           2
 L leucine             9.9         52           3
 M methionine          2.3         12           1
 N asparagine          2.9         15           2
 P proline             5.7         30           2
 Q glutamine           3.0         16           2
 R arginine            4.4         23           2
 S serine              9.1         48           3
 T threonine           5.1         27           3
 V valine              4.9         26           3
 W tryptophan          1.0          5           1
 Y tyrosine            2.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle 2-like 1 (PITSLRE proteins) isof... 
CDC2L1                1.000   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                1.000   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                1.000   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                1.000   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                1.000   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.991   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.991   cell division cycle 2-like 2 isoform 1 
CDK10                 0.328   cyclin-dependent kinase 10 isoform a 
CDK10                 0.271   cyclin-dependent kinase 10 isoform d 
CDK10                 0.258   cyclin-dependent kinase 10 isoform c 
CDK10                 0.256   cyclin-dependent kinase 10 isoform b 
CDK3                  0.240   cyclin-dependent kinase 3 
CDK2                  0.239   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.223   cell division cycle 2 isoform 1 
CDC2                  0.221   cell division cycle 2 isoform 3 
CRKRS                 0.215   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.215   Cdc2-related kinase, arginine/serine-rich isoform 1...
CDC2L5                0.212   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.212   cell division cycle 2-like 5 isoform 2 
PCTK2                 0.211   PCTAIRE protein kinase 2 
CDK7                  0.210   cyclin-dependent kinase 7 
CDK5                  0.210   cyclin-dependent kinase 5 
PCTK1                 0.209   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.209   PCTAIRE protein kinase 1 isoform 1 
CCRK                  0.204   cell cycle related kinase isoform 3 
PFTK1                 0.200   PFTAIRE protein kinase 1 
CDK6                  0.199   cyclin-dependent kinase 6 
CDK6                  0.199   cyclin-dependent kinase 6 
CDK9                  0.198   cyclin-dependent kinase 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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