Guide to the Human Genome
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Name: CDC2L1 Sequence: fasta or formatted (737aa) NCBI GI: 16332362
Description:

cell division cycle 2-like 1 (PITSLRE proteins) isoform 4

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [782aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 2
alt prot [526aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 3
alt prot [748aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 5
alt prot [780aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 8
alt prot [771aa] cell division cycle 2-like 1 (PITSLRE proteins) isoform 9
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         32           2
 C cysteine            0.4          3           1
 D aspartate           5.6         41           3
 E glutamate          17.0        125          13
 F phenylalanine       2.6         19           1
 G glycine             5.7         42           2
 H histidine           2.7         20           2
 I isoleucine          3.1         23           1
 K lysine              7.9         58           2
 L leucine             7.9         58           3
 M methionine          2.6         19           1
 N asparagine          2.2         16           2
 P proline             5.2         38           2
 Q glutamine           3.5         26           2
 R arginine            9.6         71           2
 S serine              8.4         62           3
 T threonine           3.9         29           3
 V valine              4.2         31           3
 W tryptophan          0.9          7           1
 Y tyrosine            2.3         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle 2-like 1 (PITSLRE proteins) isof... 
CDC2L1                0.994   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.994   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.991   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.990   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.979   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.976   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.707   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDK10                 0.232   cyclin-dependent kinase 10 isoform a 
CDK10                 0.192   cyclin-dependent kinase 10 isoform d 
CDK10                 0.183   cyclin-dependent kinase 10 isoform c 
CDK10                 0.181   cyclin-dependent kinase 10 isoform b 
CDK3                  0.170   cyclin-dependent kinase 3 
CDK2                  0.169   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.158   cell division cycle 2 isoform 1 
CDC2                  0.156   cell division cycle 2 isoform 3 
CDC2L5                0.154   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.154   cell division cycle 2-like 5 isoform 2 
CRKRS                 0.152   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.152   Cdc2-related kinase, arginine/serine-rich isoform 1...
PCTK2                 0.149   PCTAIRE protein kinase 2 
CDK7                  0.148   cyclin-dependent kinase 7 
CDK5                  0.148   cyclin-dependent kinase 5 
PCTK1                 0.147   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.147   PCTAIRE protein kinase 1 isoform 1 
LOC100133692          0.145   PREDICTED: similar to cell division cycle 2-like 1 ...
CCRK                  0.144   cell cycle related kinase isoform 3 
PFTK1                 0.141   PFTAIRE protein kinase 1 
CDK6                  0.141   cyclin-dependent kinase 6 
CDK6                  0.141   cyclin-dependent kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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