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Search of human proteins with 20070376
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20070376 solute carrier family 38, member 10 isoform b [Homo
sapiens]
(780 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20070376 solute carrier family 38, member 10 isoform b [Homo ... 1567 0.0
gi|83921602 solute carrier family 38, member 10 isoform a [Homo ... 1379 0.0
gi|21361602 solute carrier family 38, member 2 [Homo sapiens] 126 9e-29
gi|5870893 solute carrier family 38, member 3 [Homo sapiens] 106 7e-23
gi|8922692 solute carrier family 38, member 7 [Homo sapiens] 105 1e-22
gi|193788624 solute carrier family 38, member 5 [Homo sapiens] 102 1e-21
gi|24429574 solute carrier family 38, member 6 [Homo sapiens] 94 4e-19
gi|117168277 amino acid transporter system A1 [Homo sapiens] 88 3e-17
gi|117168275 amino acid transporter system A1 [Homo sapiens] 88 3e-17
gi|122937281 solute carrier family 38, member 8 [Homo sapiens] 87 6e-17
gi|27735137 solute carrier family 38, member 11 [Homo sapiens] 86 1e-16
gi|219689132 solute carrier family 38, member 4 [Homo sapiens] 72 3e-12
gi|18482385 solute carrier family 38, member 4 [Homo sapiens] 72 3e-12
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 68 3e-11
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 65 2e-10
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 65 2e-10
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 64 7e-10
gi|17999520 solute carrier family 32, member 1 [Homo sapiens] 63 9e-10
gi|150170670 piccolo isoform 2 [Homo sapiens] 63 1e-09
gi|150378539 piccolo isoform 1 [Homo sapiens] 63 1e-09
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 62 2e-09
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 59 2e-08
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 59 2e-08
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 57 5e-08
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 57 5e-08
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 57 5e-08
gi|54860105 nadrin isoform 2 [Homo sapiens] 57 5e-08
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 57 5e-08
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 57 7e-08
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 57 9e-08
>gi|20070376 solute carrier family 38, member 10 isoform b [Homo
sapiens]
Length = 780
Score = 1567 bits (4057), Expect = 0.0
Identities = 780/780 (100%), Positives = 780/780 (100%)
Query: 1 MTAAAASNWGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKS 60
MTAAAASNWGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKS
Sbjct: 1 MTAAAASNWGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKS 60
Query: 61 ASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQV 120
ASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQV
Sbjct: 61 ASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQV 120
Query: 121 GGTFRMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKHGLFSG 180
GGTFRMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKHGLFSG
Sbjct: 121 GGTFRMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKHGLFSG 180
Query: 181 QWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTTF 240
QWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTTF
Sbjct: 181 QWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTTF 240
Query: 241 YVMVGFFGYVSFTEATAGNVLMHFPSNLVTEMLRVGFMMSVAVGFPMMILPCRQALSTLL 300
YVMVGFFGYVSFTEATAGNVLMHFPSNLVTEMLRVGFMMSVAVGFPMMILPCRQALSTLL
Sbjct: 241 YVMVGFFGYVSFTEATAGNVLMHFPSNLVTEMLRVGFMMSVAVGFPMMILPCRQALSTLL 300
Query: 301 CEQQQKDGTFAAGGYMPPLRFKALTLSVVFGTMVGGILIPNVETILGLTGATMGSLICFI 360
CEQQQKDGTFAAGGYMPPLRFKALTLSVVFGTMVGGILIPNVETILGLTGATMGSLICFI
Sbjct: 301 CEQQQKDGTFAAGGYMPPLRFKALTLSVVFGTMVGGILIPNVETILGLTGATMGSLICFI 360
Query: 361 CPALIYKKIHKNALSSQVVLWVGLGVLVVSTVTTLSVSEEVPEDLAEEAPGGRLGEAEGL 420
CPALIYKKIHKNALSSQVVLWVGLGVLVVSTVTTLSVSEEVPEDLAEEAPGGRLGEAEGL
Sbjct: 361 CPALIYKKIHKNALSSQVVLWVGLGVLVVSTVTTLSVSEEVPEDLAEEAPGGRLGEAEGL 420
Query: 421 MKVEAARLSAQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQL 480
MKVEAARLSAQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQL
Sbjct: 421 MKVEAARLSAQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQL 480
Query: 481 DRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAP 540
DRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAP
Sbjct: 481 DRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAP 540
Query: 541 PLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGD 600
PLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGD
Sbjct: 541 PLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGD 600
Query: 601 RGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPA 660
RGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPA
Sbjct: 601 RGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPA 660
Query: 661 PGPGLPPEPREQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGS 720
PGPGLPPEPREQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGS
Sbjct: 661 PGPGLPPEPREQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGS 720
Query: 721 PARPPFSFQPPAEQTPRRAFCSLPISSLLSGNLLSALLPFKHLRHRHMACDYRFISLAPL 780
PARPPFSFQPPAEQTPRRAFCSLPISSLLSGNLLSALLPFKHLRHRHMACDYRFISLAPL
Sbjct: 721 PARPPFSFQPPAEQTPRRAFCSLPISSLLSGNLLSALLPFKHLRHRHMACDYRFISLAPL 780
>gi|83921602 solute carrier family 38, member 10 isoform a [Homo
sapiens]
Length = 1119
Score = 1379 bits (3568), Expect = 0.0
Identities = 691/696 (99%), Positives = 692/696 (99%), Gaps = 2/696 (0%)
Query: 1 MTAAAASNWGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKS 60
MTAAAASNWGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKS
Sbjct: 1 MTAAAASNWGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKS 60
Query: 61 ASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQV 120
ASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQV
Sbjct: 61 ASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQV 120
Query: 121 GGTFRMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKHGLFSG 180
GGTFRMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKHGLFSG
Sbjct: 121 GGTFRMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKHGLFSG 180
Query: 181 QWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTTF 240
QWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTTF
Sbjct: 181 QWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTTF 240
Query: 241 YVMVGFFGYVSFTEATAGNVLMHFPSNLVTEMLRVGFMMSVAVGFPMMILPCRQALSTLL 300
YVMVGFFGYVSFTEATAGNVLMHFPSNLVTEMLRVGFMMSVAVGFPMMILPCRQALSTLL
Sbjct: 241 YVMVGFFGYVSFTEATAGNVLMHFPSNLVTEMLRVGFMMSVAVGFPMMILPCRQALSTLL 300
Query: 301 CEQQQKDGTFAAGGYMPPLRFKALTLSVVFGTMVGGILIPNVETILGLTGATMGSLICFI 360
CEQQQKDGTFAAGGYMPPLRFKALTLSVVFGTMVGGILIPNVETILGLTGATMGSLICFI
Sbjct: 301 CEQQQKDGTFAAGGYMPPLRFKALTLSVVFGTMVGGILIPNVETILGLTGATMGSLICFI 360
Query: 361 CPALIYKKIHKNALSSQVVLWVGLGVLVVSTVTTLSVSEEVPEDLAEEAPGGRLGEAEGL 420
CPALIYKKIHKNALSSQVVLWVGLGVLVVSTVTTLSVSEEVPEDLAEEAPGGRLGEAEGL
Sbjct: 361 CPALIYKKIHKNALSSQVVLWVGLGVLVVSTVTTLSVSEEVPEDLAEEAPGGRLGEAEGL 420
Query: 421 MKVEAARLSAQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQL 480
MKVEAARLSAQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQL
Sbjct: 421 MKVEAARLSAQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQL 480
Query: 481 DRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAP 540
DRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAP
Sbjct: 481 DRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAP 540
Query: 541 PLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGD 600
PLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGD
Sbjct: 541 PLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGD 600
Query: 601 RGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPA 660
RGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPA
Sbjct: 601 RGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPA 660
Query: 661 PGPGLPPEPREQRDVERAGGNQAASQLE--GKASAL 694
PGPGLPPEPREQRDVERAGGNQAASQLE G+A L
Sbjct: 661 PGPGLPPEPREQRDVERAGGNQAASQLEEAGRAEML 696
Score = 45.4 bits (106), Expect = 2e-04
Identities = 74/274 (27%), Positives = 102/274 (37%), Gaps = 33/274 (12%)
Query: 431 QDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRPGQGIAVP 490
Q+P AV G+E P+ K RE +E V G+ AP + R + P
Sbjct: 752 QEPGAAVPR-GQEAPE-GKARETVENLPPLPLDPVLRAPGGRPAPSQDLNQRSLEHSEGP 809
Query: 491 VGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGV-----QGQMAPPLPDS 545
VG +P P D + + R + + + A +A G +G P+PD
Sbjct: 810 VGR----DPAGPPDGG--PDTEPRAAQAKLRDGQKDAAPRAAGTVKELPKGPEQVPVPDP 863
Query: 546 EREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDL-GPGDRGLH 604
RE PE+ + PGQ+Q + + P K A G ++ A + GPG
Sbjct: 864 AREAGGPEERLAEEFPGQSQDVTGGSQDRKKPGKEVAATGTSILKEANWLVAGPGAETGD 923
Query: 605 PRPQAVLSEQQNGLAV---GGGEKAKGGP------PPGNAAGD---TGQPAEDSDHGGKP 652
PR + + GLA GG E A P P D GQ DHGG
Sbjct: 924 PRMKPKQVSRDLGLAADLPGGAEGAAAQPQAVLRQPELRVISDGEQGGQQGHRLDHGGH- 982
Query: 653 PLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQ 686
L K G +P + R GG AA Q
Sbjct: 983 -LEMRKARGGDHVPVSHEQPR-----GGEDAAVQ 1010
>gi|21361602 solute carrier family 38, member 2 [Homo sapiens]
Length = 506
Score = 126 bits (316), Expect = 9e-29
Identities = 111/447 (24%), Positives = 194/447 (43%), Gaps = 65/447 (14%)
Query: 12 ITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAG 71
+ N+ N+IVG +L + + GI L +LL F S + S L+K+A+ Y
Sbjct: 77 VFNLSNAIVGSGILGLSYAMANTGIALFIILLTFVSIFSLYSVHLLLKTANEGGSLLYEQ 136
Query: 72 LAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIG-------DLGSNFFARLFGFQVGGTF 124
L + A+G GK+ S+ +G ++ ++ +N + + + G +
Sbjct: 137 LGYKAFGLVGKLAASGSITMQNIGAMSSYLFIVKYELPLVIQALTNIEDKTGLWYLNGNY 196
Query: 125 RMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIV--------------- 169
L+ VSL ++LPLSL RN+ + S ++LL F+ V++
Sbjct: 197 ---LVLLVSLVVILPLSLFRNL-GYLGYTSGLSLLCMVFFLIVVICKKFQVPCPVEAALI 252
Query: 170 ---------------LSSLKHGLFSGQWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPT 214
+ +L H + R ++ +PI SF C VLP
Sbjct: 253 INETINTTLTQPTALVPALSHNVTENDSCRPHYFIFNSQTVYAVPILIFSFVCHPAVLPI 312
Query: 215 YDSLDEPSVKTMSSIFASSLNVVTTFYVMVGFFGYVSFTEATAGNVLMHFPSNLVTEML- 273
Y+ L + S + M ++ S + Y++ FGY++F E +L + S L T++L
Sbjct: 313 YEELKDRSRRRMMNVSKISFFAMFLMYLLAALFGYLTFYEHVESELLHTYSSILGTDILL 372
Query: 274 ---RVGFMMSVAVGFPMMILPCRQALSTLLCEQQQKDGTFAAGGYMPPLRFKALTLSVVF 330
R+ +M+V + P++I P R +++ LLC KD ++ R +T+S++
Sbjct: 373 LIVRLAVLMAVTLTVPVVIFPIRSSVTHLLC--ASKDFSW--------WRHSLITVSILA 422
Query: 331 GTMVGGILIPNVETILGLTGATMGSLICFICPALIYKKIHKNALSSQV-----VLWVGLG 385
T + I +P + I G GA+ S++ FI P+ Y K+ K V + ++ G
Sbjct: 423 FTNLLVIFVPTIRDIFGFIGASAASMLIFILPSAFYIKLVKKEPMKSVQKIGALFFLLSG 482
Query: 386 VLVVSTVTTLSVSEEVPEDLAEEAPGG 412
VLV++ L V D APGG
Sbjct: 483 VLVMTGSMALIVL-----DWVHNAPGG 504
>gi|5870893 solute carrier family 38, member 3 [Homo sapiens]
Length = 504
Score = 106 bits (265), Expect = 7e-23
Identities = 96/399 (24%), Positives = 170/399 (42%), Gaps = 56/399 (14%)
Query: 12 ITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAG 71
+ N+ N+I+G +L + + GI+L LL + ++ S L+KS+ + R Y
Sbjct: 72 VFNLSNAIMGSGILGLAYAMANTGIILFLFLLTAVALLSSYSIHLLLKSSGVVGIRAYEQ 131
Query: 72 LAFHAYGKAGKMLVETSMIGLMLGTCIAF-YVVIGDLGS------NFFARLFGFQVGGTF 124
L + A+G GK+ ++ +G ++ Y++ +L N + + + G +
Sbjct: 132 LGYRAFGTPGKLAAALAITLQNIGAMSSYLYIIKSELPLVIQTFLNLEEKTSDWYMNGNY 191
Query: 125 RMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKH--------- 175
L+ VS+ I+LPL+L R + +S+ L VF + V+ H
Sbjct: 192 ---LVILVSVTIILPLALMRQL--GYLGYSSGFSLSCMVFFLIAVIYKKFHVPCPLPPNF 246
Query: 176 ----GLFSGQWLRRVSY---VRWEGVFRC--------------IPIFGMSFACQSQVLPT 214
G FS + + V E C IPI +F C +VLP
Sbjct: 247 NNTTGNFSHVEIVKEKVQLQVEPEASAFCTPSYFTLNSQTAYTIPIMAFAFVCHPEVLPI 306
Query: 215 YDSLDEPSVKTMSSIFASSLNVVTTFYVMVGFFGYVSFTEATAGNVLMHF----PSNLVT 270
Y L +PS K M I S+ V+ Y + FGY++F +L + P +++
Sbjct: 307 YTELKDPSKKKMQHISNLSIAVMYIMYFLAALFGYLTFYNGVESELLHTYSKVDPFDVLI 366
Query: 271 EMLRVGFMMSVAVGFPMMILPCRQALSTLLCEQQQKDGTFAAGGYMPPLRFKALTLSVVF 330
+RV + +V + P+++ P R+A+ +L Q+ LR + + ++
Sbjct: 367 LCVRVAVLTAVTLTVPIVLFPVRRAIQQMLFPNQE----------FSWLRHVLIAVGLLT 416
Query: 331 GTMVGGILIPNVETILGLTGATMGSLICFICPALIYKKI 369
+ I PN+ I G+ GAT + FI PA+ Y +I
Sbjct: 417 CINLLVIFAPNILGIFGVIGATSAPFLIFIFPAIFYFRI 455
>gi|8922692 solute carrier family 38, member 7 [Homo sapiens]
Length = 462
Score = 105 bits (263), Expect = 1e-22
Identities = 95/397 (23%), Positives = 166/397 (41%), Gaps = 19/397 (4%)
Query: 7 SNWGLITNIVNSIVGVSVLTMPFCFKQCG-IVLGALLLVFCSWMTHQSCMFLVKSASLSK 65
S G I +VN+ +G +L P F G + G L + + L + S
Sbjct: 52 STLGAIFIVVNACLGAGLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVILAYCSQASN 111
Query: 66 RRTYAGLAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQVGG--- 122
RTY + + GK +L E ++ GTCIAF ++IGD A + G
Sbjct: 112 ERTYQEVVWAVCGKLTGVLCEVAIAVYTFGTCIAFLIIIGDQQDKIIAVMAKEPEGASGP 171
Query: 123 --TFRMFLLFAVSLCIVLPLSLQRNM-MASIQSFSAMALLFYTVFMFVIVLSSLKHGLFS 179
T R F + + +LPLS+ R + SF ++ +Y + +I +
Sbjct: 172 WYTDRKFTISLTAFLFILPLSIPREIGFQKYASFLSVVGTWYVTAIVIIKYIWPDKEMTP 231
Query: 180 GQWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTT 239
G L R + W VF +P F C +P ++S+ +P VKT + +++ +
Sbjct: 232 GNILTRPA--SWMAVFNAMPTICFGFQCHVSSVPVFNSMQQPEVKTWGGVVTAAMVIALA 289
Query: 240 FYVMVGFFGYVSFTEATAGNVLMHFPS-NLVTEMLRVGFMMSVAVGFPMMILPCRQALST 298
Y+ G G+++F A +VL+ +PS ++ + R ++SV +P++ R +
Sbjct: 290 VYMGTGICGFLTFGAAVDPDVLLSYPSEDMAVAVARAFIILSVLTSYPILHFCGRAVVEG 349
Query: 299 LLCEQQQKDGTFAAGGYMPPLRFKAL-TLSVVFGTMVGGILIPNVETILGLTGATMGSLI 357
L Q G R + L TL T++ + IP++ ++ + G + +
Sbjct: 350 LWLRYQ---GVPVEEDVGRERRRRVLQTLVWFLLTLLLALFIPDIGKVISVIGG-LAACF 405
Query: 358 CFICP--ALIYKKIHKNALSSQVVLW--VGLGVLVVS 390
F+ P LI K+ + W V GVL+V+
Sbjct: 406 IFVFPGLCLIQAKLSEMEEVKPASWWVLVSYGVLLVT 442
>gi|193788624 solute carrier family 38, member 5 [Homo sapiens]
Length = 472
Score = 102 bits (254), Expect = 1e-21
Identities = 86/382 (22%), Positives = 168/382 (43%), Gaps = 35/382 (9%)
Query: 12 ITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAG 71
+ N+ N+I+G +L + + G++ LL+ + ++ S L+ A ++ R Y
Sbjct: 54 VFNLSNAIMGSGILGLAYAMAHTGVIFFLALLLCIALLSSYSIHLLLTCAGIAGIRAYEQ 113
Query: 72 LAFHAYGKAGKMLVETSMIGLMLGTCIAF-YVVIGDLGSNFFARLFGFQVGGTFRM--FL 128
L A+G AGK++V T + +G ++ +++ +L L+ G F L
Sbjct: 114 LGQRAFGPAGKVVVATVICLHNVGAMSSYLFIIKSELPLVIGTFLYMDPEGDWFLKGNLL 173
Query: 129 LFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKHGLFSGQWLRRVSY 188
+ VS+ I+LPL+L ++ + + S ++L F+ ++ + G G +
Sbjct: 174 IIIVSVLIILPLALMKH-LGYLGYTSGLSLTCMLFFLVSVIYKKFQLGCAIGHNETAMES 232
Query: 189 VRWEG--------------------VFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSS 228
G + +PI +F C +VLP Y L PS + M +
Sbjct: 233 EALVGLPSQGLNSSCEAQMFTVDSQMSYTVPIMAFAFVCHPEVLPIYTELCRPSKRRMQA 292
Query: 229 IFASSLNVVTTFYVMVGFFGYVSFTEATAGNVL-MHFPSNLVTEMLRVGFMMSVAVGFPM 287
+ S+ + Y + FGY++F + +L M+ + + +R+ +++V + P+
Sbjct: 293 VANVSIGAMFCMYGLTATFGYLTFYSSVKAEMLHMYSQKDPLILCVRLAVLLAVTLTVPV 352
Query: 288 MILPCRQALSTLLCEQQQKDGTFAAGGYMPPLRFKALTLSVVFGTMVGGILIPNVETILG 347
++ P R+AL LL F + P R A+ L ++ V I +P + I G
Sbjct: 353 VLFPIRRALQQLL---------FPGKAFSWP-RHVAIALILLVLVNVLVICVPTIRDIFG 402
Query: 348 LTGATMGSLICFICPALIYKKI 369
+ G+T + FI P++ Y +I
Sbjct: 403 VIGSTSAPSLIFILPSIFYLRI 424
>gi|24429574 solute carrier family 38, member 6 [Homo sapiens]
Length = 456
Score = 94.4 bits (233), Expect = 4e-19
Identities = 81/402 (20%), Positives = 177/402 (44%), Gaps = 42/402 (10%)
Query: 12 ITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAG 71
+ N++N+I+G +L + + G+ + LL+ + + S L+ + +Y
Sbjct: 51 VFNLMNAIMGSGILGLAYVMANTGVFGFSFLLLTVALLASYSVHLLLSMCIQTAVTSYED 110
Query: 72 LAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQVGGTFRMF---- 127
L A+G GK++V ++I +G ++ ++I + A + F G R +
Sbjct: 111 LGLFAFGLPGKLVVAGTIIIQNIGAMSSYLLIIK---TELPAAIAEFLTGDYSRYWYLDG 167
Query: 128 --LLFAVSLCIVLPLSL--QRNMMASIQSFSAMALLFYTVFMFV--------IVLSSLKH 175
LL + + IV PL+L + + S S ++F+ + + + + L+ ++
Sbjct: 168 QTLLIIICVGIVFPLALLPKIGFLGYTSSLSFFFMMFFALVVIIKKWSIPCPLTLNYVEK 227
Query: 176 GL----FSGQWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFA 231
G + ++ + E + +P SF C + +LP Y L PS K M ++
Sbjct: 228 GFQISNVTDDCKPKLFHFSKESAY-ALPTMAFSFLCHTSILPIYCELQSPSKKRMQNVTN 286
Query: 232 SSLNVVTTFYVMVGFFGYVSFTEATAGNVL----MHFPSNLVTEMLRVGFMMSVAVGFPM 287
+++ + Y + FGY++F + +L + ++V +++ + +V + P+
Sbjct: 287 TAIALSFLIYFISALFGYLTFYDKVESELLKGYSKYLSHDVVVMTVKLCILFAVLLTVPL 346
Query: 288 MILPCRQALSTLLCEQQQKDGTFAAGGYMPPLRFKALTLSVVFGTMVGGILIPNVETILG 347
+ P R+A++ + F + +R +TL++ ++ I +P++ + G
Sbjct: 347 IHFPARKAVTMM----------FFSNFPFSWIRHFLITLALNIIIVLLAIYVPDIRNVFG 396
Query: 348 LTGATMGSLICFICPALIYKKIHKNALSSQVVLWVGLGVLVV 389
+ GA+ + + FI P L Y K+ + S W LG V+
Sbjct: 397 VVGASTSTCLIFIFPGLFYLKLSREDFLS----WKKLGAFVL 434
>gi|117168277 amino acid transporter system A1 [Homo sapiens]
Length = 487
Score = 88.2 bits (217), Expect = 3e-17
Identities = 89/401 (22%), Positives = 166/401 (41%), Gaps = 38/401 (9%)
Query: 12 ITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAG 71
+ N+ N+I+G +L + F GI+L +LL + ++ S L+ + + Y
Sbjct: 77 VFNLSNAIMGSGILGLAFALANTGILLFLVLLTSVTLLSIYSINLLLICSKETGCMVYEK 136
Query: 72 LAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFG----FQVGGTFRMF 127
L +G GK ++ + G +++ ++ + + L G F
Sbjct: 137 LGEQVFGTTGKFVIFGATSLQNTGAMLSYLFIVKNELPSAIKFLMGKEETFSAWYVDGRV 196
Query: 128 LLFAVSLCIVLPLSLQRNM--MASIQSFSAMALLFYTV------FMFVIVLSSLKHGLFS 179
L+ V+ I+LPL L +N+ + FS ++F+ + F ++ L + +
Sbjct: 197 LVVIVTFGIILPLCLLKNLGYLGYTSGFSLSCMVFFLIVVIYKKFQIPCIVPELNSTISA 256
Query: 180 GQWLRRV---SYVRWEG-VFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLN 235
YV + +P +F C VLP Y L + S K M + S
Sbjct: 257 NSTNADTCTPKYVTFNSKTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFF 316
Query: 236 VVTTFYVMVGFFGYVSFTEATAGNVLMHFPS--NLVTEMLRVGFMMSVAVGFPMMILPCR 293
+ Y + FGY++F + ++L + S +++ +R+ +++V + P++ R
Sbjct: 317 AMFVMYFLTAIFGYLTFYDNVQSDLLHKYQSKDDILILTVRLAVIVAVILTVPVLFFTVR 376
Query: 294 QALSTLLCEQQQKDGTFAAGGYMPPLRFKALT--LSVVFGTMVGGILIPNVETILGLTGA 351
+L L A R +T L VV +V I IP+++ I G+ G
Sbjct: 377 SSLFEL-----------AKKTKFNLCRHTVVTCILLVVINLLV--IFIPSMKDIFGVVGV 423
Query: 352 TMGSLICFICPALIYKKI-----HKNALSSQVVLWVGLGVL 387
T +++ FI P+ +Y KI K L++GLGVL
Sbjct: 424 TSANMLIFILPSSLYLKITDQDGDKGTQRIWAALFLGLGVL 464
>gi|117168275 amino acid transporter system A1 [Homo sapiens]
Length = 487
Score = 88.2 bits (217), Expect = 3e-17
Identities = 89/401 (22%), Positives = 166/401 (41%), Gaps = 38/401 (9%)
Query: 12 ITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAG 71
+ N+ N+I+G +L + F GI+L +LL + ++ S L+ + + Y
Sbjct: 77 VFNLSNAIMGSGILGLAFALANTGILLFLVLLTSVTLLSIYSINLLLICSKETGCMVYEK 136
Query: 72 LAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFG----FQVGGTFRMF 127
L +G GK ++ + G +++ ++ + + L G F
Sbjct: 137 LGEQVFGTTGKFVIFGATSLQNTGAMLSYLFIVKNELPSAIKFLMGKEETFSAWYVDGRV 196
Query: 128 LLFAVSLCIVLPLSLQRNM--MASIQSFSAMALLFYTV------FMFVIVLSSLKHGLFS 179
L+ V+ I+LPL L +N+ + FS ++F+ + F ++ L + +
Sbjct: 197 LVVIVTFGIILPLCLLKNLGYLGYTSGFSLSCMVFFLIVVIYKKFQIPCIVPELNSTISA 256
Query: 180 GQWLRRV---SYVRWEG-VFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLN 235
YV + +P +F C VLP Y L + S K M + S
Sbjct: 257 NSTNADTCTPKYVTFNSKTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFF 316
Query: 236 VVTTFYVMVGFFGYVSFTEATAGNVLMHFPS--NLVTEMLRVGFMMSVAVGFPMMILPCR 293
+ Y + FGY++F + ++L + S +++ +R+ +++V + P++ R
Sbjct: 317 AMFVMYFLTAIFGYLTFYDNVQSDLLHKYQSKDDILILTVRLAVIVAVILTVPVLFFTVR 376
Query: 294 QALSTLLCEQQQKDGTFAAGGYMPPLRFKALT--LSVVFGTMVGGILIPNVETILGLTGA 351
+L L A R +T L VV +V I IP+++ I G+ G
Sbjct: 377 SSLFEL-----------AKKTKFNLCRHTVVTCILLVVINLLV--IFIPSMKDIFGVVGV 423
Query: 352 TMGSLICFICPALIYKKI-----HKNALSSQVVLWVGLGVL 387
T +++ FI P+ +Y KI K L++GLGVL
Sbjct: 424 TSANMLIFILPSSLYLKITDQDGDKGTQRIWAALFLGLGVL 464
>gi|122937281 solute carrier family 38, member 8 [Homo sapiens]
Length = 435
Score = 87.0 bits (214), Expect = 6e-17
Identities = 87/380 (22%), Positives = 169/380 (44%), Gaps = 29/380 (7%)
Query: 3 AAAASNWGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVK-SA 61
AA S+ G + ++ S +G +L P+ F + G V+ A L+ S + S + ++ +A
Sbjct: 21 AATLSSMGAVFILMKSALGAGLLNFPWAFSKAGGVVPAFLVELVSLVFLISGLVILGYAA 80
Query: 62 SLSKRRTYAGLAFHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQVG 121
++S + TY G+ G A L E + +L +AF VIGD +L +
Sbjct: 81 AVSGQATYQGVVRGLCGPAIGKLCEACFLLNLLMISVAFLRVIGDQ----LEKLCDSLLS 136
Query: 122 GT---------FRMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSS 172
GT + F L +S+ ++LPLS R + + Q ++++ ++ +++ +
Sbjct: 137 GTPPAPQPWYADQRFTLPLLSVLVILPLSAPREI--AFQKYTSILGTLAACYLALVI--T 192
Query: 173 LKHGLFSGQWLRR----VSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSS 228
+++ L+ +R +S W VF P F C + Y S+ + S+ +
Sbjct: 193 VQYYLWPQGLVRESHPSLSPASWTSVFSVFPTICFGFQCHEAAVSIYCSMRKRSLSHWAL 252
Query: 229 IFASSLNVVTTFYVMVGFFGYVSFTEATAGNVLMHFPSN-LVTEMLRVGFMMSVAVGFPM 287
+ SL Y + G +G+++F + +VLM +P N +V + RV F +S+ +P+
Sbjct: 253 VSVLSLLACCLIYSLTGVYGFLTFGTEVSADVLMSYPGNDMVIIVARVLFAVSIVTVYPI 312
Query: 288 MILPCRQALSTLLCEQQQKDGTFAAGGYMPPLRF---KALTLSVVFGTMVGGILIPNVET 344
++ R + ++ G + P LT+ V T+ + +P++
Sbjct: 313 VLFLGRSVMQDFW--RRSCLGGWGPSALADPSGLWVRMPLTILWVTVTLAMALFMPDLSE 370
Query: 345 ILGLTGATMGSLICFICPAL 364
I+ + G + S FI P L
Sbjct: 371 IVSIIGG-ISSFFIFIFPGL 389
>gi|27735137 solute carrier family 38, member 11 [Homo sapiens]
Length = 384
Score = 86.3 bits (212), Expect = 1e-16
Identities = 85/377 (22%), Positives = 161/377 (42%), Gaps = 42/377 (11%)
Query: 32 KQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAGLAFHAYGKAGKMLVETSMIG 91
KQ G LG LLL + S++T S + L+K +LS TY L +G G +L+
Sbjct: 2 KQAGFPLGILLLFWVSYVTDFSLVLLIKGGALSGTDTYQSLVNKTFGFPGYLLLSVLQF- 60
Query: 92 LMLGTCIAFYVVIGDLGSNFFARLFGFQVGGTFRMFLLFAVSLCIVLPLSLQRNMMASIQ 151
Y I D + F R F++ ++ LPLSL RN +A +
Sbjct: 61 --------LYPFIVDPENVFIG-----------RHFIIGLSTVTFTLPLSLYRN-IAKLG 100
Query: 152 SFSAMALLFYTVFMFVIVLSSLKHGLFSGQWLRRVSYVRWEGVFRCIPIFGMSFACQSQV 211
S ++ T+ + +++ ++ G + + + + + + +F C
Sbjct: 101 KVSLISTGLTTLILGIVMARAISLGPHIPKTEDAWVFAK-PNAIQAVGVMSFAFICHHNS 159
Query: 212 LPTYDSLDEPSVKTMSSIFASSLNVVTTFYVMVGFFGYVSFTEATAGNVLMHFPSN--LV 269
Y SL+EP+V S + S+ + + GY++FT T G++ ++ N LV
Sbjct: 160 FLVYSSLEEPTVAKWSRLIHMSIVISVFICIFFATCGYLTFTGFTQGDLFENYCRNDDLV 219
Query: 270 TEMLRVGFMMSVAVGFPMMILPCRQALSTLLCEQQQKDGTFAAGGYMPPLRFKALTLSVV 329
T R + ++V + +PM R+ ++ + GG + + +T+ V+
Sbjct: 220 T-FGRFCYGVTVILTYPMECFVTREVIANVF-----------FGGNLSSVFHIVVTVMVI 267
Query: 330 FGTMVGGILIPNVETILGLTGATMGSLICFICPALIYKKI------HKNALSSQVVLWVG 383
+ +LI + +L L G + + FI P+ Y K+ H + + S V+L +G
Sbjct: 268 TVATLVSLLIDCLGIVLELNGVLCATPLIFIIPSACYLKLSEEPRTHSDKIMSCVMLPIG 327
Query: 384 LGVLVVSTVTTLSVSEE 400
V+V V ++ +++
Sbjct: 328 AVVMVFGFVMAITNTQD 344
>gi|219689132 solute carrier family 38, member 4 [Homo sapiens]
Length = 547
Score = 71.6 bits (174), Expect = 3e-12
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 16/179 (8%)
Query: 198 IPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTTFYVMVGFFGYVSFTEATA 257
IPI +F C +VLP Y L + S + M ++ S+ + Y++ FGY++F
Sbjct: 336 IPILVFAFVCHPEVLPIYSELKDRSRRKMQTVSNISITGMLVMYLLAALFGYLTF-YGEV 394
Query: 258 GNVLMHFPSNLVT-----EMLRVGFMMSVAVGFPMMILPCRQALSTLLCEQQQKDGTFAA 312
+ L+H S + T M+R+ +++V + P+++ P R ++ TLL ++
Sbjct: 395 EDELLHAYSKVYTLDIPLLMVRLAVLVAVTLTVPIVLFPIRTSVITLLFPKRP------- 447
Query: 313 GGYMPPLRFKALTLSVVFGTMVGGILIPNVETILGLTGATMGSLICFICPALIYKKIHK 371
+R + ++ V IL+P ++ I G GA+ +++ FI PA+ Y K+ K
Sbjct: 448 ---FSWIRHFLIAAVLIALNNVLVILVPTIKYIFGFIGASSATMLIFILPAVFYLKLVK 503
Score = 46.2 bits (108), Expect = 1e-04
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 14 NIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAGLA 73
N+ N+I+G +L + + GI+L ++L+ + ++ S L+K+A Y L
Sbjct: 83 NLSNAIMGSGILGLSYAMANTGIILFIIMLLAVAILSLYSVHLLLKTAKEGGSLIYEKLG 142
Query: 74 FHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQVG-GTFRM---FLL 129
A+G GK+ S+ +G ++ +I G + G + + +L+
Sbjct: 143 EKAFGWPGKIGAFVSITMQNIGAMSSYLFIIKYELPEVIRAFMGLEENTGEWYLNGNYLI 202
Query: 130 FAVSLCIVLPLSLQRNM--MASIQSFSAMALLFY 161
VS+ I+LPLSL +N+ + FS ++F+
Sbjct: 203 IFVSVGIILPLSLLKNLGYLGYTSGFSLTCMVFF 236
>gi|18482385 solute carrier family 38, member 4 [Homo sapiens]
Length = 547
Score = 71.6 bits (174), Expect = 3e-12
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 16/179 (8%)
Query: 198 IPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTTFYVMVGFFGYVSFTEATA 257
IPI +F C +VLP Y L + S + M ++ S+ + Y++ FGY++F
Sbjct: 336 IPILVFAFVCHPEVLPIYSELKDRSRRKMQTVSNISITGMLVMYLLAALFGYLTF-YGEV 394
Query: 258 GNVLMHFPSNLVT-----EMLRVGFMMSVAVGFPMMILPCRQALSTLLCEQQQKDGTFAA 312
+ L+H S + T M+R+ +++V + P+++ P R ++ TLL ++
Sbjct: 395 EDELLHAYSKVYTLDIPLLMVRLAVLVAVTLTVPIVLFPIRTSVITLLFPKRP------- 447
Query: 313 GGYMPPLRFKALTLSVVFGTMVGGILIPNVETILGLTGATMGSLICFICPALIYKKIHK 371
+R + ++ V IL+P ++ I G GA+ +++ FI PA+ Y K+ K
Sbjct: 448 ---FSWIRHFLIAAVLIALNNVLVILVPTIKYIFGFIGASSATMLIFILPAVFYLKLVK 503
Score = 46.2 bits (108), Expect = 1e-04
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 14 NIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAGLA 73
N+ N+I+G +L + + GI+L ++L+ + ++ S L+K+A Y L
Sbjct: 83 NLSNAIMGSGILGLSYAMANTGIILFIIMLLAVAILSLYSVHLLLKTAKEGGSLIYEKLG 142
Query: 74 FHAYGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLFGFQVG-GTFRM---FLL 129
A+G GK+ S+ +G ++ +I G + G + + +L+
Sbjct: 143 EKAFGWPGKIGAFVSITMQNIGAMSSYLFIIKYELPEVIRAFMGLEENTGEWYLNGNYLI 202
Query: 130 FAVSLCIVLPLSLQRNM--MASIQSFSAMALLFY 161
VS+ I+LPLSL +N+ + FS ++F+
Sbjct: 203 IFVSVGIILPLSLLKNLGYLGYTSGFSLTCMVFF 236
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 68.2 bits (165), Expect = 3e-11
Identities = 95/360 (26%), Positives = 130/360 (36%), Gaps = 69/360 (19%)
Query: 386 VLVVSTVTTLSVSEEVPEDLA-EEAPGGRLGEAEGLMKVEAARLSAQDPVVAVAEDGREK 444
+L+ + LS ++ + ED++ EE+P G+ EG + P
Sbjct: 4 ILLSVALLALSSAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPP----------P 53
Query: 445 PKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHD 504
P P+ R Q +GP PG+ +G P QG G + PP P
Sbjct: 54 PGKPEGRPPQGGNQSQGPPPRPGKPEGP----------PPQG-----GNQSQGPPPRPGK 98
Query: 505 KVVVDEGQDREVPEENK-PPSRHAGGKAPGVQG---QMAPPLPDSEREKQEPEQGEVGK- 559
EGQ + +++ PP R + P QG PP + E P+ G +
Sbjct: 99 P----EGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 154
Query: 560 ---RPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQN 616
RPG+ + G Q P G+P P + G +G PRP +
Sbjct: 155 PPPRPGKPEGPPPQGG--NQSQGPPPHPGKPEGPPPQG--GNQSQGPPPRPG-----KPE 205
Query: 617 GLAVGGGEKAKGGPP-PGNAAGDTGQ----PAEDSDHGGKPPLPAEKPAPGPGLPPEPRE 671
G GG +++G PP PG G Q P H GKP P + P PP P
Sbjct: 206 GPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGR 265
Query: 672 QRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPARPPFSFQPP 731
+ GGN L PPA P P PQ G P RPP QPP
Sbjct: 266 PQGPPPPGGN--------PQQPLPPPAGKPQGPPPPPQG--------GRPHRPP-QGQPP 308
Score = 60.8 bits (146), Expect = 5e-09
Identities = 76/293 (25%), Positives = 103/293 (35%), Gaps = 46/293 (15%)
Query: 469 EDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENK-PPSRHA 527
ED + + + +G G + PP P EG+ + +++ PP R
Sbjct: 21 EDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKP----EGRPPQGGNQSQGPPPRPG 76
Query: 528 GGKAPGVQG---QMAPPLPDSEREKQEPEQGEVGK----RPGQAQALEEAGDLPEDPQKV 580
+ P QG PP + E Q P+ G + RPG+ + G Q
Sbjct: 77 KPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGG--NQSQGP 134
Query: 581 PEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPP-PGNAAGDT 639
P G+P P + G +G PRP + G GG +++G PP PG G
Sbjct: 135 PPRPGKPEGPPPQG--GNQSQGPPPRPG-----KPEGPPPQGGNQSQGPPPHPGKPEGPP 187
Query: 640 GQPAEDSDHGGKPPLPAEKPAPGP-------GLPPEPREQRDVERAGGN----------- 681
Q S G PP P + P P G PP P + GGN
Sbjct: 188 PQGGNQSQ--GPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGK 245
Query: 682 -QAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPARPPFSFQPPAE 733
Q EG PP PG P P G+ Q L PA P PP +
Sbjct: 246 PQGPPPQEGNKPQRPPP---PGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQ 295
Score = 46.6 bits (109), Expect = 9e-05
Identities = 59/239 (24%), Positives = 86/239 (35%), Gaps = 38/239 (15%)
Query: 444 KPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLD----RPGQGIAVPVGEAHRHEP 499
+P P+ + Q +GP PG+ +G Q RPG+ P ++ +
Sbjct: 95 RPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 154
Query: 500 PVPHDKVVVDEGQDREVPEENKPPSRHAG---GKAP--GVQGQMAPPLPDSEREKQEPEQ 554
P P EG + +++ P H G G P G Q Q PP P + E P+
Sbjct: 155 PPPRPGK--PEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRP-GKPEGPPPQG 211
Query: 555 GEVGK----RPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAV 610
G + RPG+ + G PQ P G+P P +E G++ P P
Sbjct: 212 GNQSQGPPPRPGKPEGPPSQGG--NKPQGPPPHPGKPQGPPPQE----GNKPQRPPPPG- 264
Query: 611 LSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKP-APGPGLPPE 668
+ +G PPPG P G PP +P P G PP+
Sbjct: 265 --------------RPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPPQ 309
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 65.5 bits (158), Expect = 2e-10
Identities = 79/309 (25%), Positives = 101/309 (32%), Gaps = 42/309 (13%)
Query: 442 REKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPV 501
R P P+ Q +GP PG+ G P QG P G PP
Sbjct: 112 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP----------PPQGGNKPQG------PPP 155
Query: 502 PHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRP 561
P D + PP + G G PP P + + P+ G + P
Sbjct: 156 PGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 215
Query: 562 ---GQAQALEEAGDLPEDPQKVPEADGQ-PAVQPAKEDLGPGDRGLHPRPQAVLSEQQNG 617
G+ Q GD + P Q P Q + GP P P + G
Sbjct: 216 PPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGP------PPPPG----KPQG 265
Query: 618 LAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAP-----GPGLPPEPREQ 672
GG K +G PPPG G Q S PP + P P G PP P +
Sbjct: 266 PPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKP 325
Query: 673 RDVERAGGNQAASQLEGKASALQPPASGPGS---GSPLPQPWGDAQVILGSPARPPFSFQ 729
+ GGN+ PP G S SP +P G Q +P PP
Sbjct: 326 QGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPP---- 381
Query: 730 PPAEQTPRR 738
PPA P++
Sbjct: 382 PPAGGNPQQ 390
Score = 60.1 bits (144), Expect = 8e-09
Identities = 85/355 (23%), Positives = 118/355 (33%), Gaps = 70/355 (19%)
Query: 386 VLVVSTVTTLSVSEEVPEDLAEEAPGGRLGEAEGLMKVEAARLSAQDPVVAVAEDGREKP 445
+L+ + LS ++ + ED+++E E+ L A +P A + G KP
Sbjct: 4 ILLSVALLALSSAQNLNEDVSQE---------------ESPSLIAGNPQGAPPQGGN-KP 47
Query: 446 KLPKEREELEQA-------QIKGPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHE 498
+ P Q Q +GP PG+ G P QG P G
Sbjct: 48 QGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP----------PPQGGNKPQG------ 91
Query: 499 PPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVG 558
P P K Q + PP + G G PP P + + P+ G
Sbjct: 92 -PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 150
Query: 559 KRP---GQAQALEEAGDLPEDPQKVPEADGQ-PAVQPAKEDLGPGDRGLHPRPQAVLSEQ 614
+ P G+ Q GD + P Q P Q + GP P P +
Sbjct: 151 QGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGP------PPPPG----K 200
Query: 615 QNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAP-----GPGLPPEP 669
G GG K +G PPPG G Q S PP + P P G PP P
Sbjct: 201 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPP 260
Query: 670 REQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPARP 724
+ + GGN+ PP G G P PQ ++ P +P
Sbjct: 261 GKPQGPPPQGGNKPQG----------PPPPGKPQGPP-PQGGSKSRSSRSPPGKP 304
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 65.5 bits (158), Expect = 2e-10
Identities = 69/268 (25%), Positives = 94/268 (35%), Gaps = 28/268 (10%)
Query: 483 PGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPL 542
PG+ P ++ + P P K Q + PP + G G PP
Sbjct: 54 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPP 113
Query: 543 PDSEREKQEPEQGEVGKRP---GQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPG 599
P + + P+ G + P G+ Q GD P+ P P Q + GP
Sbjct: 114 PPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP- 172
Query: 600 DRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKP 659
P P + G GG+K +G PPPG G Q + P P P
Sbjct: 173 -----PPPPG----KPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPP 223
Query: 660 APG----PGLPPEPREQRDVERAGGNQ-AASQLEGKASALQPPASG----PGSGSPLPQP 710
G G PP P + + GGN+ GK PPA G + SP +P
Sbjct: 224 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG--PPAQGGSKSQSARSPPGKP 281
Query: 711 WGDAQVILGSPARPPFSFQPPAEQTPRR 738
G Q +P PP PPA P++
Sbjct: 282 QGPPQQEGNNPQGPP----PPAGGNPQQ 305
Score = 61.6 bits (148), Expect = 3e-09
Identities = 86/361 (23%), Positives = 118/361 (32%), Gaps = 54/361 (14%)
Query: 386 VLVVSTVTTLSVSEEVPEDLA-EEAPGGRLGEAEGLMKVEAARLSAQDPVVAVAE----D 440
+L+ + LS ++ + ED++ EE+P G +G + P +
Sbjct: 4 ILLSVALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQ 63
Query: 441 GREKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPP 500
G KP+ P + +GP + +P P QG P G PP
Sbjct: 64 GGNKPQGPPP-----PGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG------PP 112
Query: 501 VPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKR 560
P K Q P+ PP + G PP D R + P G
Sbjct: 113 PPPGKPQGPPPQGGNRPQGPPPPGKPQG----------PPPQGDKSRSPRSPPGKPQGPP 162
Query: 561 PGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLH--PRPQAVLSEQQN-- 616
P + G+ P+ P P P Q K+ GP G P PQ S
Sbjct: 163 P-------QGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSP 215
Query: 617 -----GLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPRE 671
G GG + +G PPP G+P GG P P G P +
Sbjct: 216 PGKPQGPPPQGGNQPQGPPPP------PGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGS 269
Query: 672 QRDVERA--GGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPARPPFSFQ 729
+ R+ G Q Q EG PP +G P P G Q P RPP +
Sbjct: 270 KSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQ----GPPRPPQGGR 325
Query: 730 P 730
P
Sbjct: 326 P 326
Score = 40.8 bits (94), Expect = 0.005
Identities = 42/148 (28%), Positives = 51/148 (34%), Gaps = 35/148 (23%)
Query: 609 AVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPE 668
++++ G + GG K +G PPP G+P GG P + P PG P
Sbjct: 30 SLIAGNPQGPSPQGGNKPQGPPPP------PGKPQGPPPQGGNKP----QGPPPPGKPQG 79
Query: 669 PREQRDVERA--------------GGNQAASQLEGKASALQPPASG-------PGSGSPL 707
P Q D R+ GGNQ PP G P G P
Sbjct: 80 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQ 139
Query: 708 -PQPWGDAQVILGSPARPPFSFQPPAEQ 734
P P GD SP PP Q P Q
Sbjct: 140 GPPPQGDKS---RSPRSPPGKPQGPPPQ 164
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 63.5 bits (153), Expect = 7e-10
Identities = 84/337 (24%), Positives = 124/337 (36%), Gaps = 55/337 (16%)
Query: 387 LVVSTVTTLSVSEEVPEDLAEEAPGGRLGEAEGLMKVEAARLSAQDPVVAVAEDGREKPK 446
L V T + E PE EAP EAEG M+ A++ ++ +PK
Sbjct: 1980 LEVEVETQEAEGEAQPESEDVEAP-----EAEGEMQ------EAEEEAQPESDGVEAQPK 2028
Query: 447 LP-KEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRPGQG-IAVPVGEAHRHEPPVPHD 504
+E +E+E K D DG EAPE + + +G + GEAH V
Sbjct: 2029 SEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQ 2088
Query: 505 KVVVD---EGQDREVPEENKPPSRHAGGKAPGVQGQMAPP-----LPDSEREKQEPEQG- 555
+ + E + E PE + G +AP +G+ P P++E E Q +G
Sbjct: 2089 EAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGV 2148
Query: 556 EVGKRPGQAQALEE---AGDLPEDPQ------KVPEADGQPAVQPAKEDL-GPGDRG--- 602
E G+AQ E A + E+ Q + PEA+G+ QP E + P G
Sbjct: 2149 EAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGE--AQPESEGIEAPEAEGEAQ 2206
Query: 603 --------------LHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDH 648
P P+ V + + G A E G G+ G +
Sbjct: 2207 PELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEEAS 2266
Query: 649 GGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAAS 685
P+P ++P P PP P +R G S
Sbjct: 2267 ESSSPVPEDRPTP----PPSPGGDTPHQRPGSQTGPS 2299
Score = 57.4 bits (137), Expect = 5e-08
Identities = 82/343 (23%), Positives = 137/343 (39%), Gaps = 44/343 (12%)
Query: 399 EEVPEDLAEEAPGGRLGEAEGLMKVEAARLSAQDPV--VAVAEDGREKPKLPKER----E 452
E PE EAP EAEG + E+ + + V +G E P+ KE E
Sbjct: 1866 EAQPESEDVEAP-----EAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETE 1920
Query: 453 ELEQAQIKGPVDVPGRE-----DGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVV 507
+E + +G D P E + +EA +EA+ + + EA P D
Sbjct: 1921 SVEALETEGE-DEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEA 1979
Query: 508 VD-EGQDREVPEENKPPSRHAGGKAPGVQGQMAPP----LPDSEREKQEPE--------- 553
++ E + +E E +P S +AP +G+M P+S+ + +P+
Sbjct: 1980 LEVEVETQEAEGEAQPESEDV--EAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEV 2037
Query: 554 QGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSE 613
+GE K G AQ + + PE ++ EA+G+ VQ A+ + HP + V ++
Sbjct: 2038 EGETQKTEGDAQPESDGVEAPEAEEEAQEAEGE--VQEAEGE-------AHPESEDVDAQ 2088
Query: 614 QQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQR 673
+ G A E + G A G A +++ +P + G E
Sbjct: 2089 EAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGV 2148
Query: 674 DVERAGGNQAASQLEG-KASALQPPASGPGSGSPLPQPWGDAQ 715
+ + A G +A + EG +A + A G P+ G+AQ
Sbjct: 2149 EAQDAEG-EAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQ 2190
Score = 39.3 bits (90), Expect = 0.014
Identities = 93/459 (20%), Positives = 165/459 (35%), Gaps = 57/459 (12%)
Query: 287 MMILPCRQALS-TLLCEQQQKDGTFAAGGYMPPLRFKALTLSVVFGTMVGGILIPNVETI 345
M++ P R+AL+ LL + QQ+ + + L L + T+ P + T
Sbjct: 1586 MVLEPPREALTGELLLQTQQRRHRLRGLRNLSAFSERTLGLGPLSFTLEDE---PALSTA 1642
Query: 346 LG--LTGATMGSLICFICPALIYKKIHKNALSSQVVLWVGLGVLV----VSTVTTLSVSE 399
LG L G C C A + KK+ + +S + + G + + + E
Sbjct: 1643 LGSQLGEEAEGEEFC-PCEACVRKKV--SPMSPKATMGATRGPIKEAFDLQQILQRKRGE 1699
Query: 400 EVPEDLAEEAPGGRLGEAEGLMKVEAARLS-----AQDPVVAVAEDGREKPKLPKEREEL 454
+ AE APG + V+ A +Q P V EDG +L ++++
Sbjct: 1700 HTDGEAAEVAPGKTHTDPTSTRTVQGAEGGLGPGLSQGPGVDEGEDGEGSQRLNRDKDP- 1758
Query: 455 EQAQIKGPVDVPGRE------DGKEAPEEAQLDRPGQGIAV---PVGEAHRHEPPVPHDK 505
+ + +G RE + E + ++ G+GI+ G+ HE
Sbjct: 1759 KLGEAEGDAMAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHE------- 1811
Query: 506 VVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQG-EVGKRPGQA 564
D Q ++ P G++ G +G AP ++E E Q +G E + G A
Sbjct: 1812 ---DNLQGEAAAGGDQDP-----GQSDGAEGIEAP---EAEGEAQPESEGVEAPEAEGDA 1860
Query: 565 QALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGE 624
Q E + + PEA+G+ QP ED+ + +P++ +E E
Sbjct: 1861 QEAEGEAQPESEDVEAPEAEGE--AQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPE 1918
Query: 625 -------KAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPR-EQRDVE 676
+ +G P + + + E + P + E + E DVE
Sbjct: 1919 TESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVE 1978
Query: 677 RAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQ 715
+ EG+A P + + + +AQ
Sbjct: 1979 ALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQ 2017
>gi|17999520 solute carrier family 32, member 1 [Homo sapiens]
Length = 525
Score = 63.2 bits (152), Expect = 9e-10
Identities = 89/442 (20%), Positives = 185/442 (41%), Gaps = 53/442 (11%)
Query: 9 WGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVK--------S 60
W N+ N+I G+ VL +P+ G LG L++F + + + L+
Sbjct: 119 WEAGWNVTNAIQGMFVLGLPYAILHGGY-LGLFLIIFAAVVCCYTGKILIACLYEENEDG 177
Query: 61 ASLSKRRTYAGLAFHA----YGKAGKMLVETSMIGLMLGTCIAFYVVIGDLGSNFFARLF 116
+ R +Y +A + G +V + I ++ TCI + VV G+L N F L
Sbjct: 178 EVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPGLP 237
Query: 117 GFQVGGTFRMFLLFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSLKHG 176
Q + ++ ++LP + +N+ A + FS + L + V +++ L
Sbjct: 238 VSQKSWSI-------IATAVLLPCAFLKNLKA-VSKFSLLCTLAHFVINILVIAYCLSRA 289
Query: 177 LFSGQWLRRVSYVRWEGVFRCIPIFGMSFACQSQVLPTYDSLDEPS-VKTMSSIFASSLN 235
W + Y+ + I I S+ Q + ++ +PS M + +
Sbjct: 290 R-DWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAAC 348
Query: 236 VVTTFYVMVGFFGYVSFTEATAGNVLMHFPSNLVTEMLRVGFMMSVAVGFPMMILPCRQA 295
V+ + +V Y+++ + T + + P + + ++ + + + +P+ +
Sbjct: 349 VLKGLFALVA---YLTWADETKEVITDNLPGS-IRAVVNIFLVAKALLSYPLPFFAAVEV 404
Query: 296 LSTLLCEQQQKDGTFAAGGYMPPLRFKA----LTLSVVFGTMVGGILIPNVETILGLTGA 351
L L ++ + F Y R K+ L ++V T++ I +P+ ++GLTG+
Sbjct: 405 LEKSLFQEGSR--AFFPACYSGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGS 462
Query: 352 TMGSLICFICPALIY-KKIHKNALSSQVVLWVGLGVLVVSTVTTLSVSEEVPEDLAEEAP 410
G+ +CF+ P+L + + + + L QV + + + V+ + ++S
Sbjct: 463 LTGAGLCFLLPSLFHLRLLWRKLLWHQV--FFDVAIFVIGGICSVS-------------- 506
Query: 411 GGRLGEAEGLMKVEAARLSAQD 432
G + EGL +EA R +A+D
Sbjct: 507 -GFVHSLEGL--IEAYRTNAED 525
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 62.8 bits (151), Expect = 1e-09
Identities = 80/336 (23%), Positives = 120/336 (35%), Gaps = 34/336 (10%)
Query: 443 EKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRP---------GQGI--AVPV 491
++P+ K + I+GP P + D + P + RP G+ + ++P
Sbjct: 242 QQPEKIKSQPPGTGKPIQGPTQTP-QTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPS 300
Query: 492 GEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQ--GQMAPPLPDSEREK 549
+ P P G ++ P KPP++ +G P Q G + PP+ K
Sbjct: 301 PSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTK 360
Query: 550 QEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADG---QPAVQPAKEDLGPGDRGLHPR 606
+ K P Q E+ P+ + + G PA QP P + P+
Sbjct: 361 PPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAK-PPTQQVGTPK 419
Query: 607 PQAVLSEQQNGL-----AVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAP 661
P A QQ GL A G + P PG P + S P P + P
Sbjct: 420 PLA----QQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQ-LP 474
Query: 662 GPGLPPEPRE---QRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVIL 718
GP PP + + ++ G + SQ G +PP PG P PQ G +
Sbjct: 475 GPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGST---KPPPQQPGPAKPSPQQPGSTKPPS 531
Query: 719 GSPARPPFSFQPPAEQTPRRAFCSLPISSLLSGNLL 754
P S Q P+ P + P+S SG L
Sbjct: 532 QQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPL 567
Score = 58.5 bits (140), Expect = 2e-08
Identities = 92/386 (23%), Positives = 133/386 (34%), Gaps = 75/386 (19%)
Query: 393 TTLSVSEEVPEDLAEEAPGG-----------RLGEAEGLMKVEAARLSAQDPVVAVAEDG 441
T S+S + PE + + PG + A+ ++ +A+R + + E
Sbjct: 235 TPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGES- 293
Query: 442 REKPKLPKEREELEQAQIKG--PVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRH-E 498
KP LP + Q G P PG E K P A+ G+ P+ + +
Sbjct: 294 -VKPSLPSPSKPPIQQPTPGKPPAQQPGHE--KSQPGPAKPPAQPSGLTKPLAQQPGTVK 350
Query: 499 PPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSERE-----KQEPE 553
PPV + P KPP++ G P Q Q P SE+ Q P
Sbjct: 351 PPV-------------QPPGTTKPPAQPLGPAKPPAQ-QTGSEKPSSEQPGPKALAQPPG 396
Query: 554 QGEV-GKRPGQAQALEEAGDLP---------EDPQKVPEADGQPAVQPAKEDLGPGDRGL 603
G+ ++PG A+ + P + P K P P QP GPG
Sbjct: 397 VGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQP-----GPGKIPA 451
Query: 604 HPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAED-------SDHGGKPPLPA 656
S QQ G + PP G P + S G P
Sbjct: 452 QQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPP 511
Query: 657 EKPAPGPGLPPEPREQRDVERAGGNQAASQLE---GKASALQP--PASGPGSGSPLPQPW 711
++P P P +P + + G+ S + K SA Q P S GSG PL QP
Sbjct: 512 QQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPL-QP- 569
Query: 712 GDAQVILGSPARPPFSFQPPAEQTPR 737
P P + QPP++ P+
Sbjct: 570 ---------PTVSPSAKQPPSQGLPK 586
Score = 42.4 bits (98), Expect = 0.002
Identities = 69/337 (20%), Positives = 118/337 (35%), Gaps = 48/337 (14%)
Query: 416 EAEGLMKVEAAR---LSAQDPVVAVAEDGREKPKLPKEREEL-EQAQIKGPVDVPGREDG 471
EA+ L K + + ++ VA+D ++PK+ K +L + D+P +
Sbjct: 725 EADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQ 784
Query: 472 KEAPEEA------QLDRPGQGIAVPVGEAHRHEPPVPHD-KVVVDEGQDREVPEENKPPS 524
+A E+ +P Q P GE P D K + D ++ P S
Sbjct: 785 SQAEEKTTPPLKTDSAKPSQSFP-PTGEKVS-----PFDSKAIPRPASDSKIISHPGPSS 838
Query: 525 RHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPG-QAQALEEAGDLPEDPQKV--- 580
G K D ++K+EP++ + P A+ + + P P+
Sbjct: 839 ESKGQKQV-----------DPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQ 887
Query: 581 ----PEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQ-NGLAVGGGEK---------A 626
P+ +P Q + L G P+ Q ++ G G G +
Sbjct: 888 TVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLIS 947
Query: 627 KGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQ 686
G P ++ G P + + +PP P PP P + V++ AA +
Sbjct: 948 TAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEK 1007
Query: 687 LEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPAR 723
LE KA Q P P P D++ + P +
Sbjct: 1008 LEPKAE--QAPTVKRTETEKKPPPIKDSKSLTAEPQK 1042
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 62.8 bits (151), Expect = 1e-09
Identities = 80/336 (23%), Positives = 120/336 (35%), Gaps = 34/336 (10%)
Query: 443 EKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRP---------GQGI--AVPV 491
++P+ K + I+GP P + D + P + RP G+ + ++P
Sbjct: 242 QQPEKIKSQPPGTGKPIQGPTQTP-QTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPS 300
Query: 492 GEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQ--GQMAPPLPDSEREK 549
+ P P G ++ P KPP++ +G P Q G + PP+ K
Sbjct: 301 PSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTK 360
Query: 550 QEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADG---QPAVQPAKEDLGPGDRGLHPR 606
+ K P Q E+ P+ + + G PA QP P + P+
Sbjct: 361 PPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAK-PPTQQVGTPK 419
Query: 607 PQAVLSEQQNGL-----AVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAP 661
P A QQ GL A G + P PG P + S P P + P
Sbjct: 420 PLA----QQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQ-LP 474
Query: 662 GPGLPPEPRE---QRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVIL 718
GP PP + + ++ G + SQ G +PP PG P PQ G +
Sbjct: 475 GPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGST---KPPPQQPGPAKPSPQQPGSTKPPS 531
Query: 719 GSPARPPFSFQPPAEQTPRRAFCSLPISSLLSGNLL 754
P S Q P+ P + P+S SG L
Sbjct: 532 QQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPL 567
Score = 58.5 bits (140), Expect = 2e-08
Identities = 92/386 (23%), Positives = 133/386 (34%), Gaps = 75/386 (19%)
Query: 393 TTLSVSEEVPEDLAEEAPGG-----------RLGEAEGLMKVEAARLSAQDPVVAVAEDG 441
T S+S + PE + + PG + A+ ++ +A+R + + E
Sbjct: 235 TPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGES- 293
Query: 442 REKPKLPKEREELEQAQIKG--PVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRH-E 498
KP LP + Q G P PG E K P A+ G+ P+ + +
Sbjct: 294 -VKPSLPSPSKPPIQQPTPGKPPAQQPGHE--KSQPGPAKPPAQPSGLTKPLAQQPGTVK 350
Query: 499 PPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSERE-----KQEPE 553
PPV + P KPP++ G P Q Q P SE+ Q P
Sbjct: 351 PPV-------------QPPGTTKPPAQPLGPAKPPAQ-QTGSEKPSSEQPGPKALAQPPG 396
Query: 554 QGEV-GKRPGQAQALEEAGDLP---------EDPQKVPEADGQPAVQPAKEDLGPGDRGL 603
G+ ++PG A+ + P + P K P P QP GPG
Sbjct: 397 VGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQP-----GPGKIPA 451
Query: 604 HPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAED-------SDHGGKPPLPA 656
S QQ G + PP G P + S G P
Sbjct: 452 QQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPP 511
Query: 657 EKPAPGPGLPPEPREQRDVERAGGNQAASQLE---GKASALQP--PASGPGSGSPLPQPW 711
++P P P +P + + G+ S + K SA Q P S GSG PL QP
Sbjct: 512 QQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPL-QP- 569
Query: 712 GDAQVILGSPARPPFSFQPPAEQTPR 737
P P + QPP++ P+
Sbjct: 570 ---------PTVSPSAKQPPSQGLPK 586
Score = 42.4 bits (98), Expect = 0.002
Identities = 69/337 (20%), Positives = 118/337 (35%), Gaps = 48/337 (14%)
Query: 416 EAEGLMKVEAAR---LSAQDPVVAVAEDGREKPKLPKEREEL-EQAQIKGPVDVPGREDG 471
EA+ L K + + ++ VA+D ++PK+ K +L + D+P +
Sbjct: 725 EADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQ 784
Query: 472 KEAPEEA------QLDRPGQGIAVPVGEAHRHEPPVPHD-KVVVDEGQDREVPEENKPPS 524
+A E+ +P Q P GE P D K + D ++ P S
Sbjct: 785 SQAEEKTTPPLKTDSAKPSQSFP-PTGEKVS-----PFDSKAIPRPASDSKIISHPGPSS 838
Query: 525 RHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPG-QAQALEEAGDLPEDPQKV--- 580
G K D ++K+EP++ + P A+ + + P P+
Sbjct: 839 ESKGQKQV-----------DPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQ 887
Query: 581 ----PEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQ-NGLAVGGGEK---------A 626
P+ +P Q + L G P+ Q ++ G G G +
Sbjct: 888 TVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLIS 947
Query: 627 KGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQ 686
G P ++ G P + + +PP P PP P + V++ AA +
Sbjct: 948 TAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEK 1007
Query: 687 LEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPAR 723
LE KA Q P P P D++ + P +
Sbjct: 1008 LEPKAE--QAPTVKRTETEKKPPPIKDSKSLTAEPQK 1042
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 62.4 bits (150), Expect = 2e-09
Identities = 99/333 (29%), Positives = 128/333 (38%), Gaps = 58/333 (17%)
Query: 430 AQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVD---VPGREDGKEAPE-EAQLDRPGQ 485
A +P A + P LP R + + +GP PG+ G E P + PG
Sbjct: 1313 AGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGP 1372
Query: 486 ----GIAVPVGEAHRHEPP-VPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAP 540
G P+G+ PP +P + D+G DR E PP GG APG G P
Sbjct: 1373 SGPPGPRGPLGDPGPRGPPGLPGTAMKGDKG-DRG---ERGPPGPGEGGIAPGEPG--LP 1426
Query: 541 PLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKED---LG 597
LP S QG VG PG+ E GD + +P G P Q + +G
Sbjct: 1427 GLPGSPGP-----QGPVGP-PGKKG---EKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIG 1477
Query: 598 P-GDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPP--------PG-----NAAGDTGQPA 643
P GDRG P P L E GEK + GPP PG A G G P
Sbjct: 1478 PKGDRGF-PGP---LGE--------AGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPG 1525
Query: 644 EDSDHG--GKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEGKASALQPPASGP 701
G G+P P + GP + E+ DV AG + A+ ++G+ P P
Sbjct: 1526 PTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGP-RGATGVQGERGP--PGLVLP 1582
Query: 702 GSGSPLPQPWGDAQVILGSPARPPFSFQPPAEQ 734
G P P + L A PP PP E+
Sbjct: 1583 GDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEK 1615
Score = 53.5 bits (127), Expect = 7e-07
Identities = 65/241 (26%), Positives = 90/241 (37%), Gaps = 29/241 (12%)
Query: 513 DREVPEENKPPSRHAGGKAP----GVQGQMAPP----LPDSEREKQEPEQ-GEVGKRPGQ 563
DR P PP G + P G+ G+ P LP E + GE G+R +
Sbjct: 2007 DRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEK 2066
Query: 564 AQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGG 623
+ E+ D P P G P + + ++ GPG G P ++ + G G
Sbjct: 2067 GERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQG 2126
Query: 624 EKA----------KGGPPPGNAAGDTGQPAEDSDHG--GKPPLPAEKPAPGP---GLPPE 668
K +G P P G+ G P E G GKP L + PGP P
Sbjct: 2127 PKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPG 2186
Query: 669 PREQRDVERAGGNQAASQLEGKASALQPPA---SGPGSGSPLPQPWGDAQVI--LGSPAR 723
P + G Q S L+G+ PP +GP LP P G + ++ GSP
Sbjct: 2187 PPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGL 2246
Query: 724 P 724
P
Sbjct: 2247 P 2247
Score = 52.0 bits (123), Expect = 2e-06
Identities = 72/273 (26%), Positives = 96/273 (35%), Gaps = 30/273 (10%)
Query: 457 AQIKGPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREV 516
A KG PG + +P A PG P + P +P + E R
Sbjct: 1292 ATAKGERGFPGADGRPGSPGRA--GNPG----TPGAPGLKGSPGLPGPRGDPGERGPRGP 1345
Query: 517 PEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKR-----PGQAQALEEAG 571
E P + GG+ PG+ G+ P P + P G+ G R PG A G
Sbjct: 1346 KGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGP-LGDPGPRGPPGLPGTAMK----G 1400
Query: 572 DLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPP 631
D + ++ P G+ + P + L PG G P PQ + G+K + G
Sbjct: 1401 DKGDRGERGPPGPGEGGIAPGEPGL-PGLPG-SPGPQGPVGPP--------GKKGEKGDS 1450
Query: 632 PGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEGKA 691
A G GQP + G + P A P G P E + G A
Sbjct: 1451 EDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPG 1510
Query: 692 SALQPPASGPGSGSPLPQPWGDAQVILGSPARP 724
A +P A GP G P P Q G P RP
Sbjct: 1511 VAGRPGAKGP-EGPPGPT---GRQGEKGEPGRP 1539
Score = 51.6 bits (122), Expect = 3e-06
Identities = 89/313 (28%), Positives = 118/313 (37%), Gaps = 45/313 (14%)
Query: 448 PKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRPGQ-GIAVPVGEAHRHEPPVPHDKV 506
P E+ + + GPV GR+ E E+ PG G+ GE R P +
Sbjct: 1612 PGEKGDPGRPGPPGPVGPRGRDG--EVGEKGDEGPPGDPGLPGKAGE--RGLRGAPGVRG 1667
Query: 507 VVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSE--------REKQEP-EQGEV 557
V E D+ P E+ G +G+ PP P REK EP ++G+
Sbjct: 1668 PVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQE 1727
Query: 558 GKR-----PGQAQALEEAGDLPEDPQKVPEADGQPAVQ-PAKEDLGPGDRGLHPRPQAVL 611
G R PG A E G E + P G P V+ PA E GDRG P +
Sbjct: 1728 GPRGPKGDPGLPGAPGERGI--EGFRGPPGPQGDPGVRGPAGEK---GDRG----PPGL- 1777
Query: 612 SEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGP----GLPP 667
+ ++GL G A G P AAG G P D G P L E+ PGP GLP
Sbjct: 1778 -DGRSGL--DGKPGAAGPSGPNGAAGKAGDPGRD----GLPGLRGEQGLPGPSGPPGLPG 1830
Query: 668 EPRE--QRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPARP- 724
+P E + + G +G+ + G P+ A ILG P
Sbjct: 1831 KPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPG 1890
Query: 725 -PFSFQPPAEQTP 736
P PP + P
Sbjct: 1891 LPGPVGPPGQGFP 1903
Score = 46.2 bits (108), Expect = 1e-04
Identities = 63/234 (26%), Positives = 89/234 (38%), Gaps = 47/234 (20%)
Query: 509 DEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALE 568
D G + + +P + + G PG++G + P QG+ G
Sbjct: 2555 DNGDPGDKGSKGEPGDKGSAG-LPGLRGLLGP-------------QGQPG---------- 2590
Query: 569 EAGDLPEDPQKVPEADGQPAVQPAKEDLG-PGDRGLHPRPQAVLSEQQNGLAVGGGEKAK 627
A +P DP P DG P ++ K D+G G RGL + GL G+K +
Sbjct: 2591 -AAGIPGDPGS-PGKDGVPGIRGEKGDVGFMGPRGLKGERGV---KGACGLDGEKGDKGE 2645
Query: 628 GGPP--PGNAA--GDTGQPAEDSDHG--GKPPLPAEKP------APGPGLPPEPREQRDV 675
GPP PG A G+ G+P G GK L K PGP + +R
Sbjct: 2646 AGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGT 2705
Query: 676 ERAGGNQAASQLEGKASALQPPAS-GPGSGSPLPQPWGD----AQVILGSPARP 724
GG S +G A PP S GP L G+ + ++G+P P
Sbjct: 2706 PGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVP 2759
Score = 45.1 bits (105), Expect = 3e-04
Identities = 96/340 (28%), Positives = 117/340 (34%), Gaps = 46/340 (13%)
Query: 395 LSVSEEVPEDLAEEAPGGRLGEAEGLMKVEAARLSAQDPVVAVAEDGREKPKLPKEREEL 454
+SV E P E+ P G G K E Q P + R P + +R E
Sbjct: 2094 VSVDEPGPGLSGEQGPPGLKGA-----KGEPGSNGDQGP-----KGDRGVPGIKGDRGEP 2143
Query: 455 EQAQIKGPVDVPGREDGKEAPEEAQLDRPG-QGIAVPVGEAHRHEPPVPHDKVVV----- 508
G +PG E G PE +PG QG P G H P P +
Sbjct: 2144 GPRGQDGNPGLPG-ERGMAGPE----GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAG 2198
Query: 509 DEGQD--REVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQA 566
+G + P E PP R G G G PP P QG G PGQ
Sbjct: 2199 PQGPSGLKGEPGETGPPGRGLTGPT-GAVGLPGPPGPSG----LVGPQGSPGL-PGQVGE 2252
Query: 567 LEEAGDLPEDPQKVPEAD-GQPAVQPAKEDLGP-GDRGLHPRPQAVLSEQQNGLAVGGGE 624
+ G D + D G P V + GP G +G P P + GL GE
Sbjct: 2253 TGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKG-EPGPTGAPGQAVVGLPGAKGE 2311
Query: 625 KAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAA 684
K G P G A G+P D G P + A G P +P E G + A
Sbjct: 2312 K---GAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGED-------GQKGA 2361
Query: 685 SQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPARP 724
+G P PGS P P P G + LG P P
Sbjct: 2362 PGPKGFKG--DPGVGVPGSPGP-PGPPG-VKGDLGLPGLP 2397
Score = 44.7 bits (104), Expect = 3e-04
Identities = 75/276 (27%), Positives = 97/276 (35%), Gaps = 33/276 (11%)
Query: 461 GPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPP-VPHDKVVVDEGQDREVPEE 519
G V GR G+ + +R QG P G PP P KV VDE E+
Sbjct: 2049 GGVGEAGRP-GERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQ 2107
Query: 520 NKPPSRHAGGKAPGVQGQMAPP----LPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPE 575
P + A G+ PG G P +P + ++ EP PG AG
Sbjct: 2108 GPPGLKGAKGE-PGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAG---- 2162
Query: 576 DPQKVPEADGQPAVQPAKEDLGP----GDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPP 631
+G+P +Q + GP GD G P G + GE + GPP
Sbjct: 2163 -------PEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPP 2215
Query: 632 PGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEGKA 691
G TG G P P PGLP + E A G AS +G
Sbjct: 2216 GRGLTGPTGAVGLPGPPG---PSGLVGPQGSPGLPGQVGE-TGKPGAPGRDGASGKDGDR 2271
Query: 692 SALQPPASGPGSGSPL-----PQPWG-DAQVILGSP 721
+ P S PG P+ P P G Q ++G P
Sbjct: 2272 GSPGVPGS-PGLPGPVGPKGEPGPTGAPGQAVVGLP 2306
Score = 43.1 bits (100), Expect = 0.001
Identities = 73/261 (27%), Positives = 92/261 (35%), Gaps = 44/261 (16%)
Query: 480 LDRPGQGIAVPVGEAHRHEPPVPHD-KVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQM 538
LD+ G+A + +A P P V +GQ E E G++GQ+
Sbjct: 1222 LDQAVSGLATALCQASFTTQPRPEPCPVYCPKGQKGEPGEM-------------GLRGQV 1268
Query: 539 APPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGP 598
PP D + G G PG A A E G P ADG+P P
Sbjct: 1269 GPP-GDPGLPGRTGAPGPQGP-PGSATAKGERG--------FPGADGRPG--------SP 1310
Query: 599 GDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEK 658
G G P A + GL G+ + GP G+ G P + G P LP K
Sbjct: 1311 GRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPR--GPKGEPGAPGQVIGGEG-PGLPGRK 1367
Query: 659 PAPGPGLPPEPREQRDVERAGG-----NQAASQLEGKASALQPPASGPGSGSPLPQPWGD 713
PGP PP PR G A +G PP GPG G P G
Sbjct: 1368 GDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPP--GPGEGGIAPGEPG- 1424
Query: 714 AQVILGSPARPPFSFQPPAEQ 734
+ GSP P PP ++
Sbjct: 1425 LPGLPGSPG-PQGPVGPPGKK 1444
Score = 42.7 bits (99), Expect = 0.001
Identities = 87/302 (28%), Positives = 108/302 (35%), Gaps = 82/302 (27%)
Query: 460 KGPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPE- 518
+GPV PG++ K E+ PGQ + GE PP + DR P
Sbjct: 1435 QGPVGPPGKKGEKGDSEDGAPGLPGQPGSP--GEQGPRGPPG-----AIGPKGDRGFPGP 1487
Query: 519 --------ENKPP----SRHAGGKA--PGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQA 564
E PP SR G A PG +G PP P QGE G+ PG+
Sbjct: 1488 LGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGR-------QGEKGE-PGR- 1538
Query: 565 QALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGP-GDRGLHPRPQAVLSEQ-QNGLAVGG 622
P DP V A P + K D+GP G RG V E+ GL + G
Sbjct: 1539 ---------PGDPAVVGPAVAGPKGE--KGDVGPAGPRGA----TGVQGERGPPGLVLPG 1583
Query: 623 GEKAKGGP----PPG-----NAAGDTGQPAEDSDHGGK-PPLPA--------------EK 658
KG P P G GD+G P E D G PP P E
Sbjct: 1584 DPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEG 1643
Query: 659 PAPGPGLPPEPREQ--------RDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQP 710
P PGLP + E+ R G+Q +G+ + P +SGP P P
Sbjct: 1644 PPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGS--PGSSGPKGDRGEPGP 1701
Query: 711 WG 712
G
Sbjct: 1702 PG 1703
Score = 42.7 bits (99), Expect = 0.001
Identities = 51/176 (28%), Positives = 70/176 (39%), Gaps = 38/176 (21%)
Query: 532 PGVQGQ------MAPPLPDSER--------EKQEPEQGEVGK--RPGQAQALEEAGDLPE 575
PG++G+ M P ER + ++ ++GE G RPG A E G+
Sbjct: 2607 PGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGE--- 2663
Query: 576 DPQKVPEADGQPAVQPAKEDL-GP-GDRGLHPRPQAVLSEQQNGL----AVGG-----GE 624
P GQ P KE L GP GDRG +P + + G +GG G
Sbjct: 2664 -----PGVPGQSGA-PGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGN 2717
Query: 625 KAKGGPP-PGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAG 679
GPP P + G G G + P P E+ PG+P P E+ + R G
Sbjct: 2718 DGSAGPPGPPGSVGPRGPEGLQGQKGERGP-PGERVVGAPGVPGAPGERGEQGRPG 2772
Score = 40.8 bits (94), Expect = 0.005
Identities = 63/226 (27%), Positives = 79/226 (34%), Gaps = 26/226 (11%)
Query: 460 KGPVDVPGREDGKEAPEE-AQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPE 518
KG PG G E A+ DR G GEA R P D G+D +
Sbjct: 2309 KGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPG-------DPGEDGQKGA 2361
Query: 519 ENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGK-----RPGQAQALEEAGDL 573
P G GV G PP P + G++G PG + G
Sbjct: 2362 PG--PKGFKGDPGVGVPGSPGPPGPPGVK-------GDLGLPGLPGAPGVVGFPGQTGPR 2412
Query: 574 PEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPG 633
E Q P + A P +E + PG G P +V +GL G+ G P P
Sbjct: 2413 GEMGQPGPSGERGLAGPPGREGI-PGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPR 2471
Query: 634 NAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAG 679
G+ G ED G + P P PG E E+ DV AG
Sbjct: 2472 GERGEPGIRGEDGRPGQEGPRGLTGP---PGSRGERGEKGDVGSAG 2514
Score = 39.7 bits (91), Expect = 0.011
Identities = 70/289 (24%), Positives = 104/289 (35%), Gaps = 59/289 (20%)
Query: 459 IKGPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVV---------- 508
++GPV G D + E+ + PG + P G+ PP P ++V
Sbjct: 1665 VRGPVGEKG--DQGDPGEDGRNGSPGS--SGPKGDRGEPGPPGPPGRLVDTGPGAREKGE 1720
Query: 509 --DEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEP--EQGEVGK----- 559
D GQ+ + P A G+ G++G PP P + + P E+G+ G
Sbjct: 1721 PGDRGQEGPRGPKGDPGLPGAPGER-GIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDG 1779
Query: 560 ------RPGQAQ------ALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGP-GDRGLHPR 606
+PG A A +AGD P DG P ++ + GP G GL +
Sbjct: 1780 RSGLDGKPGAAGPSGPNGAAGKAGD--------PGRDGLPGLRGEQGLPGPSGPPGLPGK 1831
Query: 607 P----QAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHG--------GKPPL 654
P + L+ + G + KG A+G G+ + G G P L
Sbjct: 1832 PGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGL 1891
Query: 655 PAEKPAPGPGLPPEPREQRDVERAG--GNQAASQLEGKASALQPPASGP 701
P PG G P P G G++ L G+ P S P
Sbjct: 1892 PGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVP 1940
Score = 36.6 bits (83), Expect = 0.092
Identities = 80/298 (26%), Positives = 105/298 (35%), Gaps = 53/298 (17%)
Query: 437 VAEDGREKPK-LPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAH 495
V E G + + LP R E +A G PG EDG++ + + G+ VP
Sbjct: 2323 VGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG-EDGQKGAPGPKGFKGDPGVGVPGSPGP 2381
Query: 496 RHEPPVPHDK----------VVVDEGQDREVPEENKP-PSRHAGGKAP----GVQGQMAP 540
P V D VV GQ E +P PS G P G+ G + P
Sbjct: 2382 PGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGP 2441
Query: 541 PLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEAD-GQPAVQPAKEDLGPG 599
P P G VG PG + + GD P P + G+P ++ ED PG
Sbjct: 2442 PGPP----------GSVGP-PGASGLKGDKGD-PGVGLPGPRGERGEPGIRG--EDGRPG 2487
Query: 600 D---RGLHPRPQAVLSEQQNGLAVGGGEKA-KG------GPP-PGNAAGDTGQPAEDSDH 648
RGL P + + G G K KG GPP P A GD G+
Sbjct: 2488 QEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLD 2547
Query: 649 GGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEGKASALQPPASGPGSGSP 706
G K P G EP G++ ++ L G L P +G P
Sbjct: 2548 GDKGPRGDNGDPGDKGSKGEP----------GDKGSAGLPGLRGLLGPQGQPGAAGIP 2595
Score = 33.9 bits (76), Expect = 0.60
Identities = 39/146 (26%), Positives = 51/146 (34%), Gaps = 22/146 (15%)
Query: 533 GVQGQMAPP----LPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEAD---- 584
G +G+ PP L + E EP PG+ + GD D Q P+ D
Sbjct: 2641 GDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEK 2700
Query: 585 ---GQPAVQPAKEDLG-PGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTG 640
G P + G G G P +V GL G+K + GPP G G
Sbjct: 2701 GERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQ---GQKGERGPPGERVVGAPG 2757
Query: 641 QPAEDSDHGGKPPLPAEKPAPGPGLP 666
P + G E+ PGP P
Sbjct: 2758 VPGAPGERG-------EQGRPGPAGP 2776
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 58.9 bits (141), Expect = 2e-08
Identities = 60/232 (25%), Positives = 76/232 (32%), Gaps = 40/232 (17%)
Query: 499 PPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVG 558
PP PH Q ++ P +PP + P PP P +++Q P +
Sbjct: 62 PPPPH--------QQQQQPPPQQPPPQQPPPHQP-------PPHPQPHQQQQPPPPPQDS 106
Query: 559 KRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDR-GLHPRPQAVLSEQQNG 617
+P AQ G P P + P P PG G P P ++
Sbjct: 107 SKPVVAQG---PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAP-- 161
Query: 618 LAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVER 677
G PPP +G P GG PP PA P PGPG P
Sbjct: 162 ---------PGAPPP--TPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGP-------G 203
Query: 678 AGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPARPPFSFQ 729
GG + G P S PG G P P G + G PP+ Q
Sbjct: 204 PGGPKGGKMPGGPKPGGGPGLSTPG-GHPKPPHRGGGEPRGGRQHHPPYHQQ 254
Score = 36.2 bits (82), Expect = 0.12
Identities = 59/240 (24%), Positives = 75/240 (31%), Gaps = 55/240 (22%)
Query: 458 QIKGPVDV-PGREDGKEA-----PEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEG 511
Q +GP+ PG+ K P + Q P Q P + H+PP PH + +
Sbjct: 42 QNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQ--QPPPQQPPPHQPP-PHPQPHQQQQ 98
Query: 512 QDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEV-GKRPGQAQALEEA 570
+ +KP G APGV APP S P G G PG A
Sbjct: 99 PPPPPQDSSKPVVAQGPGPAPGVGS--APPASSSAPPATPPTSGAPPGSGPGPTPTPPPA 156
Query: 571 --GDLPEDPQKVPEADGQPAVQPA------------------KEDLGPGDRGLHPRPQAV 610
P P P + G P P K+ GPG P
Sbjct: 157 VTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGP 216
Query: 611 LSEQQNGLAV----------GGGEKAKG-------------GPPPGNAAGDTGQPAEDSD 647
GL+ GGGE G GPPPG G + + DS+
Sbjct: 217 KPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSE 276
Score = 35.4 bits (80), Expect = 0.20
Identities = 41/148 (27%), Positives = 45/148 (30%), Gaps = 31/148 (20%)
Query: 622 GGEKAKGG------PPPGNAAGDTGQP--AEDSDHGGKPPLPAEKP-----APGPGLPP- 667
GG +GG PPPG P G KPP+P P P P PP
Sbjct: 20 GGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPP 79
Query: 668 ------EPREQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSP 721
+P + Q K Q P PG GS P P
Sbjct: 80 QQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSS------APP 133
Query: 722 ARPPFSFQPPAE-----QTPRRAFCSLP 744
A PP S PP TP A S P
Sbjct: 134 ATPPTSGAPPGSGPGPTPTPPPAVTSAP 161
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 58.5 bits (140), Expect = 2e-08
Identities = 63/223 (28%), Positives = 80/223 (35%), Gaps = 55/223 (24%)
Query: 513 DREVPEENKPPSRHAGGKAPGVQG---QMAPPLPDSEREKQEPEQGEVGKRP---GQAQA 566
+ +V +E P + P QG PP P + + P+ G + P G+ Q
Sbjct: 20 NEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 79
Query: 567 LEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKA 626
GD P+ P G+P P + G + P PQ GG K
Sbjct: 80 PPPQGDKSRSPRSPP---GKPQGPPPQ-----GGKPQGPPPQ-------------GGNKP 118
Query: 627 KGGPPPGNAAGDTGQPAEDSDHG----GKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQ 682
+G PPPG G Q S GKP P ++ P PP P AGGN
Sbjct: 119 QGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPP--------AGGNP 170
Query: 683 AASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPARPP 725
Q PPA P G P P P G G P+RPP
Sbjct: 171 QQPQ--------APPAGQP-QGPPRP-PQG------GRPSRPP 197
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 57.4 bits (137), Expect = 5e-08
Identities = 76/270 (28%), Positives = 94/270 (34%), Gaps = 54/270 (20%)
Query: 460 KGPVDVPGRE--DGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVP 517
+GP PG + G + P +R QG PVG PP P P
Sbjct: 906 RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGP--------------P 951
Query: 518 EENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEP--EQGEVGKR--PGQAQALEEAGDL 573
++ P G QG+ PP P Q P E G +G+R PG
Sbjct: 952 GKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPG-------- 1003
Query: 574 PEDPQKVPEADGQPAVQPAKEDLGP-------GDRGLHPRPQAVLSEQQNGL-AVGGGEK 625
P Q +P A G+ + AK D GP G GL P + GL G
Sbjct: 1004 PPGEQGLPGAAGK---EGAKGDPGPQGISGKDGPAGLRGFPG------ERGLPGAQGAPG 1054
Query: 626 AKGGPPPGNAAGDTGQPAEDSDHGGKPP--LPAEKPAPGPGLPPEPREQRDVERAGGNQA 683
KGG P G G P E G P LP PGP PP P ++ G Q
Sbjct: 1055 LKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGR---PGPQGPPGPAGEKGAPGEKGPQG 1111
Query: 684 ASQLEGKASALQPPASGPGSGSPLPQPWGD 713
+ +G +Q P PG P P D
Sbjct: 1112 PAGRDG----VQGPVGLPGPAGPAGSPGED 1137
Score = 52.4 bits (124), Expect = 2e-06
Identities = 74/273 (27%), Positives = 93/273 (34%), Gaps = 37/273 (13%)
Query: 459 IKGPVDVPGRE--DGKEAPEEAQL------DRPGQGIAVPVGEAHRHEPPVPHDKVVVDE 510
++GPV PG DG+ P Q D +G P G P P ++
Sbjct: 1166 LQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPG----EK 1221
Query: 511 GQDREVPEENKP-PSRHAGGKAP-GVQGQMAPP----LPDSEREKQEPEQGEVGKRPGQA 564
G++ +V P P G + P G G PP EK EP + PG+A
Sbjct: 1222 GENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEA 1281
Query: 565 QALEEAGDLPEDPQKVPE-ADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGG 623
G+ E + P A G P + PGD G P V G
Sbjct: 1282 GVGGPKGERGEKGEAGPPGAAGPPGAKGP-----PGDDGPKGNPGPV--------GFPGD 1328
Query: 624 EKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQA 683
G P P G G ED D G +P P GP PP R A G Q
Sbjct: 1329 PGPPGEPGPAGQDGVGGDKGEDGDPG-QPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQG 1387
Query: 684 ASQLEGKASALQPPAS----GPGSGSPLPQPWG 712
+G+A A PP GP + P P G
Sbjct: 1388 EKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEG 1420
Score = 48.5 bits (114), Expect = 2e-05
Identities = 87/317 (27%), Positives = 111/317 (35%), Gaps = 43/317 (13%)
Query: 408 EAPGGRLGEAEGL-MKVEAARLSAQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVP 466
+ P G +G G+ K E P E G PK ER E +A G P
Sbjct: 1251 QGPPGSVGSVGGVGEKGEPGEAGNPGPP---GEAGVGGPK--GERGEKGEAGPPGAAGPP 1305
Query: 467 GRED--GKEAPEEAQLDRPGQGIAVPVGEAHRHEP-PVPHDKVVVDEGQDREVPEENKPP 523
G + G + P+ PG + P EP P D V D+G+D + P + PP
Sbjct: 1306 GAKGPPGDDGPK----GNPGP-VGFPGDPGPPGEPGPAGQDGVGGDKGEDGD-PGQPGPP 1359
Query: 524 SRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDL----PEDPQK 579
PG G+ PP E QGE G + G+A A G P+ P
Sbjct: 1360 GPSGEAGPPGPPGKRGPP----GAAGAEGRQGEKGAK-GEAGAEGPPGKTGPVGPQGPAG 1414
Query: 580 VPEADGQPAVQ-PAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKA-KGGP------- 630
P +G + P E PG G P + GL G K KG P
Sbjct: 1415 KPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIG 1474
Query: 631 PPGNAA--------GDTGQPAEDSDHGGKPPLPAEKPAPGPGLP-PE-PREQRDVERAGG 680
PPG G G P D G P P PGLP P+ P+ + G
Sbjct: 1475 PPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAG 1534
Query: 681 NQAASQLEGKASALQPP 697
+ S L G + PP
Sbjct: 1535 QKGDSGLPGPPGSPGPP 1551
Score = 43.1 bits (100), Expect = 0.001
Identities = 93/339 (27%), Positives = 120/339 (35%), Gaps = 102/339 (30%)
Query: 466 PGREDGKEAPEE--AQLDRPGQGI-AVPVGEAHRHE-----PPVP--HDKVVVDEGQ--D 513
PG + G+ P E A+ DR G+ +P + HR E PP P D + ++G+
Sbjct: 594 PGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP 653
Query: 514 REVPEENKP-----PSRHAGGKA-PGVQGQMAPPLPDSEREKQ-EP----EQGEVGKR-- 560
R +P E P P G PG+ G PP P Q EP +QG G +
Sbjct: 654 RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 713
Query: 561 PGQAQALEEAGDLPEDPQK------VPEADGQPAVQPAKED-------LGP-GDRGL--H 604
PG + G+ + PQ +P ADG P P KE LGP G +G +
Sbjct: 714 PGPQGPIGPPGE--KGPQGKPGLAGLPGADGPPG-HPGKEGQSGEKGALGPPGPQGPIGY 770
Query: 605 PRPQAVL-SEQQNGLAVGGGEKAKGGPP----------------------------PGNA 635
P P+ V ++ GL GEK + G P P
Sbjct: 771 PGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGR 830
Query: 636 AGDTGQPAEDSDHG-----GKPPLPA---------------------EKPAPGPGLPPEP 669
AG TG P G G P LP EK A G P P
Sbjct: 831 AGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGP 890
Query: 670 REQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLP 708
R QR G++ A GK P + G G P P
Sbjct: 891 RGQRGPTGPRGSRGARGPTGKPG---PKGTSGGDGPPGP 926
Score = 39.7 bits (91), Expect = 0.011
Identities = 78/295 (26%), Positives = 104/295 (35%), Gaps = 49/295 (16%)
Query: 461 GPVDVPGREDGKEAPEEAQLDRPG-QGIAVPVGEAHRHEPPVPHDKVVVD-----EGQDR 514
GP PG+E ++ E+ L PG QG P+G P P D +G
Sbjct: 742 GPPGHPGKEG--QSGEKGALGPPGPQG---PIGY------PGPRGVKGADGVRGLKGSKG 790
Query: 515 EVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKR--PGQAQALEEAGD 572
E E+ P + G G +G++ P E + P+ G G PG + E G
Sbjct: 791 EKGEDGFPGFKGDMG-LKGDRGEVGQIGPRGEDGPEGPK-GRAGPTGDPGPSGQAGEKGK 848
Query: 573 LPEDPQKVPEADGQPAVQPAKEDLG----------PGDRGLHPRPQAVLSEQQNGLAVGG 622
L VP G P Q K G G RG+ +P G
Sbjct: 849 LG-----VPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSR 903
Query: 623 GEKAKGGPP-PGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGN 681
G + G P P +G G P + G + P PGP PP P + + G
Sbjct: 904 GARGPTGKPGPKGTSGGDGPPGPPGERGPQGP-QGPVGFPGPKGPPGPPGKDGLPGHPGQ 962
Query: 682 QAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVI--LGSPARPPFSFQPPAEQ 734
+ + +GK PP GPG P G+ I G P P PP EQ
Sbjct: 963 RGETGFQGKTG---PP--GPGGVVGPQGPTGETGPIGERGHPGPP----GPPGEQ 1008
Score = 38.9 bits (89), Expect = 0.019
Identities = 51/203 (25%), Positives = 68/203 (33%), Gaps = 38/203 (18%)
Query: 523 PSRHAGGKAPGVQGQMAPPLPDSEREKQEPE--QGEVGKR-----------PGQAQALEE 569
P G + G +G+ P P R Q P G+ GKR PG+ A +
Sbjct: 552 PGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGD 611
Query: 570 AG-----DLPED--------PQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQN 616
G LP D PQ P G ++ ++GP P+ +L
Sbjct: 612 RGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLL----- 666
Query: 617 GLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHG--GKPPLPAEKPAPGPGLPPEPREQRD 674
G G P AG G P + G G+P P ++ PGP P P+
Sbjct: 667 -----GPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIG 721
Query: 675 VERAGGNQAASQLEGKASALQPP 697
G Q L G A PP
Sbjct: 722 PPGEKGPQGKPGLAGLPGADGPP 744
Score = 38.1 bits (87), Expect = 0.032
Identities = 60/229 (26%), Positives = 77/229 (33%), Gaps = 38/229 (16%)
Query: 462 PVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENK 521
P P E G P E + GE + P VV+ G E P
Sbjct: 405 PTSPPNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPA-----VVEPGMLVEGPPGPA 459
Query: 522 PPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVP 581
P+ G PG+QG PP +R G G RPG L A LP P +
Sbjct: 460 GPAGIMG--PPGLQGPTGPPGDPGDR-------GPPG-RPG----LPGADGLPGPPGTML 505
Query: 582 EADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKA-KGGPPPGNAAGDTG 640
+ +K GP + QA+L + + L G G P P G +G
Sbjct: 506 MLPFRYGGDGSK---GPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSG 562
Query: 641 QPAEDSDHGGK-------PPLPAEKPAP--------GPGLPPEPREQRD 674
E D G + PP P KP G G+P EP + D
Sbjct: 563 AKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGD 611
Score = 38.1 bits (87), Expect = 0.032
Identities = 52/183 (28%), Positives = 65/183 (35%), Gaps = 34/183 (18%)
Query: 555 GEVGKRPGQAQALEEAGDL-PEDPQKVPEADGQPAVQPAKEDL--GPGDRGLHPRPQAVL 611
G VG PG + A E+GD P+ P+ V G P +P K G RG+ P A
Sbjct: 553 GPVGG-PGSSGAKGESGDPGPQGPRGVQGPPG-PTGKPGKRGRPGADGGRGMPGEPGAKG 610
Query: 612 SEQQNGLAVGGGEKAKGGP-----PPGNAAGDTGQPAEDSDHG----------------- 649
+GL G+K G PPG GD G ED + G
Sbjct: 611 DRGFDGLPGLPGDKGHRGERGPQGPPG-PPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPR 669
Query: 650 GKPPLPAEKPAPGPGLPPEPR----EQRDVERAG--GNQAASQLEGKASALQPPASGPGS 703
G P P + G PP P+ Q + G GN L G + PP
Sbjct: 670 GTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQ 729
Query: 704 GSP 706
G P
Sbjct: 730 GKP 732
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 57.4 bits (137), Expect = 5e-08
Identities = 76/270 (28%), Positives = 94/270 (34%), Gaps = 54/270 (20%)
Query: 460 KGPVDVPGRE--DGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVP 517
+GP PG + G + P +R QG PVG PP P P
Sbjct: 855 RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGP--------------P 900
Query: 518 EENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEP--EQGEVGKR--PGQAQALEEAGDL 573
++ P G QG+ PP P Q P E G +G+R PG
Sbjct: 901 GKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPG-------- 952
Query: 574 PEDPQKVPEADGQPAVQPAKEDLGP-------GDRGLHPRPQAVLSEQQNGL-AVGGGEK 625
P Q +P A G+ + AK D GP G GL P + GL G
Sbjct: 953 PPGEQGLPGAAGK---EGAKGDPGPQGISGKDGPAGLRGFPG------ERGLPGAQGAPG 1003
Query: 626 AKGGPPPGNAAGDTGQPAEDSDHGGKPP--LPAEKPAPGPGLPPEPREQRDVERAGGNQA 683
KGG P G G P E G P LP PGP PP P ++ G Q
Sbjct: 1004 LKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGR---PGPQGPPGPAGEKGAPGEKGPQG 1060
Query: 684 ASQLEGKASALQPPASGPGSGSPLPQPWGD 713
+ +G +Q P PG P P D
Sbjct: 1061 PAGRDG----VQGPVGLPGPAGPAGSPGED 1086
Score = 52.4 bits (124), Expect = 2e-06
Identities = 74/273 (27%), Positives = 93/273 (34%), Gaps = 37/273 (13%)
Query: 459 IKGPVDVPGRE--DGKEAPEEAQL------DRPGQGIAVPVGEAHRHEPPVPHDKVVVDE 510
++GPV PG DG+ P Q D +G P G P P ++
Sbjct: 1115 LQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPG----EK 1170
Query: 511 GQDREVPEENKP-PSRHAGGKAP-GVQGQMAPP----LPDSEREKQEPEQGEVGKRPGQA 564
G++ +V P P G + P G G PP EK EP + PG+A
Sbjct: 1171 GENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEA 1230
Query: 565 QALEEAGDLPEDPQKVPE-ADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGG 623
G+ E + P A G P + PGD G P V G
Sbjct: 1231 GVGGPKGERGEKGEAGPPGAAGPPGAKGP-----PGDDGPKGNPGPV--------GFPGD 1277
Query: 624 EKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQA 683
G P P G G ED D G +P P GP PP R A G Q
Sbjct: 1278 PGPPGEPGPAGQDGVGGDKGEDGDPG-QPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQG 1336
Query: 684 ASQLEGKASALQPPAS----GPGSGSPLPQPWG 712
+G+A A PP GP + P P G
Sbjct: 1337 EKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEG 1369
Score = 48.5 bits (114), Expect = 2e-05
Identities = 87/317 (27%), Positives = 111/317 (35%), Gaps = 43/317 (13%)
Query: 408 EAPGGRLGEAEGL-MKVEAARLSAQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVP 466
+ P G +G G+ K E P E G PK ER E +A G P
Sbjct: 1200 QGPPGSVGSVGGVGEKGEPGEAGNPGPP---GEAGVGGPK--GERGEKGEAGPPGAAGPP 1254
Query: 467 GRED--GKEAPEEAQLDRPGQGIAVPVGEAHRHEP-PVPHDKVVVDEGQDREVPEENKPP 523
G + G + P+ PG + P EP P D V D+G+D + P + PP
Sbjct: 1255 GAKGPPGDDGPK----GNPGP-VGFPGDPGPPGEPGPAGQDGVGGDKGEDGD-PGQPGPP 1308
Query: 524 SRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDL----PEDPQK 579
PG G+ PP E QGE G + G+A A G P+ P
Sbjct: 1309 GPSGEAGPPGPPGKRGPP----GAAGAEGRQGEKGAK-GEAGAEGPPGKTGPVGPQGPAG 1363
Query: 580 VPEADGQPAVQ-PAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKA-KGGP------- 630
P +G + P E PG G P + GL G K KG P
Sbjct: 1364 KPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIG 1423
Query: 631 PPGNAA--------GDTGQPAEDSDHGGKPPLPAEKPAPGPGLP-PE-PREQRDVERAGG 680
PPG G G P D G P P PGLP P+ P+ + G
Sbjct: 1424 PPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAG 1483
Query: 681 NQAASQLEGKASALQPP 697
+ S L G + PP
Sbjct: 1484 QKGDSGLPGPPGSPGPP 1500
Score = 43.1 bits (100), Expect = 0.001
Identities = 93/339 (27%), Positives = 120/339 (35%), Gaps = 102/339 (30%)
Query: 466 PGREDGKEAPEE--AQLDRPGQGI-AVPVGEAHRHE-----PPVP--HDKVVVDEGQ--D 513
PG + G+ P E A+ DR G+ +P + HR E PP P D + ++G+
Sbjct: 543 PGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP 602
Query: 514 REVPEENKP-----PSRHAGGKA-PGVQGQMAPPLPDSEREKQ-EP----EQGEVGKR-- 560
R +P E P P G PG+ G PP P Q EP +QG G +
Sbjct: 603 RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 662
Query: 561 PGQAQALEEAGDLPEDPQK------VPEADGQPAVQPAKED-------LGP-GDRGL--H 604
PG + G+ + PQ +P ADG P P KE LGP G +G +
Sbjct: 663 PGPQGPIGPPGE--KGPQGKPGLAGLPGADGPPG-HPGKEGQSGEKGALGPPGPQGPIGY 719
Query: 605 PRPQAVL-SEQQNGLAVGGGEKAKGGPP----------------------------PGNA 635
P P+ V ++ GL GEK + G P P
Sbjct: 720 PGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGR 779
Query: 636 AGDTGQPAEDSDHG-----GKPPLPA---------------------EKPAPGPGLPPEP 669
AG TG P G G P LP EK A G P P
Sbjct: 780 AGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGP 839
Query: 670 REQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLP 708
R QR G++ A GK P + G G P P
Sbjct: 840 RGQRGPTGPRGSRGARGPTGKPG---PKGTSGGDGPPGP 875
Score = 39.7 bits (91), Expect = 0.011
Identities = 78/295 (26%), Positives = 104/295 (35%), Gaps = 49/295 (16%)
Query: 461 GPVDVPGREDGKEAPEEAQLDRPG-QGIAVPVGEAHRHEPPVPHDKVVVD-----EGQDR 514
GP PG+E ++ E+ L PG QG P+G P P D +G
Sbjct: 691 GPPGHPGKEG--QSGEKGALGPPGPQG---PIGY------PGPRGVKGADGVRGLKGSKG 739
Query: 515 EVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKR--PGQAQALEEAGD 572
E E+ P + G G +G++ P E + P+ G G PG + E G
Sbjct: 740 EKGEDGFPGFKGDMG-LKGDRGEVGQIGPRGEDGPEGPK-GRAGPTGDPGPSGQAGEKGK 797
Query: 573 LPEDPQKVPEADGQPAVQPAKEDLG----------PGDRGLHPRPQAVLSEQQNGLAVGG 622
L VP G P Q K G G RG+ +P G
Sbjct: 798 LG-----VPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSR 852
Query: 623 GEKAKGGPP-PGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGN 681
G + G P P +G G P + G + P PGP PP P + + G
Sbjct: 853 GARGPTGKPGPKGTSGGDGPPGPPGERGPQGP-QGPVGFPGPKGPPGPPGKDGLPGHPGQ 911
Query: 682 QAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVI--LGSPARPPFSFQPPAEQ 734
+ + +GK PP GPG P G+ I G P P PP EQ
Sbjct: 912 RGETGFQGKTG---PP--GPGGVVGPQGPTGETGPIGERGHPGPP----GPPGEQ 957
Score = 38.9 bits (89), Expect = 0.019
Identities = 51/203 (25%), Positives = 68/203 (33%), Gaps = 38/203 (18%)
Query: 523 PSRHAGGKAPGVQGQMAPPLPDSEREKQEPE--QGEVGKR-----------PGQAQALEE 569
P G + G +G+ P P R Q P G+ GKR PG+ A +
Sbjct: 501 PGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGD 560
Query: 570 AG-----DLPED--------PQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQN 616
G LP D PQ P G ++ ++GP P+ +L
Sbjct: 561 RGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLL----- 615
Query: 617 GLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHG--GKPPLPAEKPAPGPGLPPEPREQRD 674
G G P AG G P + G G+P P ++ PGP P P+
Sbjct: 616 -----GPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIG 670
Query: 675 VERAGGNQAASQLEGKASALQPP 697
G Q L G A PP
Sbjct: 671 PPGEKGPQGKPGLAGLPGADGPP 693
Score = 38.1 bits (87), Expect = 0.032
Identities = 60/229 (26%), Positives = 77/229 (33%), Gaps = 38/229 (16%)
Query: 462 PVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENK 521
P P E G P E + GE + P VV+ G E P
Sbjct: 354 PTSPPNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPA-----VVEPGMLVEGPPGPA 408
Query: 522 PPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVP 581
P+ G PG+QG PP +R G G RPG L A LP P +
Sbjct: 409 GPAGIMG--PPGLQGPTGPPGDPGDR-------GPPG-RPG----LPGADGLPGPPGTML 454
Query: 582 EADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKA-KGGPPPGNAAGDTG 640
+ +K GP + QA+L + + L G G P P G +G
Sbjct: 455 MLPFRYGGDGSK---GPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSG 511
Query: 641 QPAEDSDHGGK-------PPLPAEKPAP--------GPGLPPEPREQRD 674
E D G + PP P KP G G+P EP + D
Sbjct: 512 AKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGD 560
Score = 38.1 bits (87), Expect = 0.032
Identities = 52/183 (28%), Positives = 65/183 (35%), Gaps = 34/183 (18%)
Query: 555 GEVGKRPGQAQALEEAGDL-PEDPQKVPEADGQPAVQPAKEDL--GPGDRGLHPRPQAVL 611
G VG PG + A E+GD P+ P+ V G P +P K G RG+ P A
Sbjct: 502 GPVGG-PGSSGAKGESGDPGPQGPRGVQGPPG-PTGKPGKRGRPGADGGRGMPGEPGAKG 559
Query: 612 SEQQNGLAVGGGEKAKGGP-----PPGNAAGDTGQPAEDSDHG----------------- 649
+GL G+K G PPG GD G ED + G
Sbjct: 560 DRGFDGLPGLPGDKGHRGERGPQGPPG-PPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPR 618
Query: 650 GKPPLPAEKPAPGPGLPPEPR----EQRDVERAG--GNQAASQLEGKASALQPPASGPGS 703
G P P + G PP P+ Q + G GN L G + PP
Sbjct: 619 GTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQ 678
Query: 704 GSP 706
G P
Sbjct: 679 GKP 681
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 57.4 bits (137), Expect = 5e-08
Identities = 76/270 (28%), Positives = 94/270 (34%), Gaps = 54/270 (20%)
Query: 460 KGPVDVPGRE--DGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVP 517
+GP PG + G + P +R QG PVG PP P P
Sbjct: 894 RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGP--------------P 939
Query: 518 EENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEP--EQGEVGKR--PGQAQALEEAGDL 573
++ P G QG+ PP P Q P E G +G+R PG
Sbjct: 940 GKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPG-------- 991
Query: 574 PEDPQKVPEADGQPAVQPAKEDLGP-------GDRGLHPRPQAVLSEQQNGL-AVGGGEK 625
P Q +P A G+ + AK D GP G GL P + GL G
Sbjct: 992 PPGEQGLPGAAGK---EGAKGDPGPQGISGKDGPAGLRGFPG------ERGLPGAQGAPG 1042
Query: 626 AKGGPPPGNAAGDTGQPAEDSDHGGKPP--LPAEKPAPGPGLPPEPREQRDVERAGGNQA 683
KGG P G G P E G P LP PGP PP P ++ G Q
Sbjct: 1043 LKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGR---PGPQGPPGPAGEKGAPGEKGPQG 1099
Query: 684 ASQLEGKASALQPPASGPGSGSPLPQPWGD 713
+ +G +Q P PG P P D
Sbjct: 1100 PAGRDG----VQGPVGLPGPAGPAGSPGED 1125
Score = 52.4 bits (124), Expect = 2e-06
Identities = 74/273 (27%), Positives = 93/273 (34%), Gaps = 37/273 (13%)
Query: 459 IKGPVDVPGRE--DGKEAPEEAQL------DRPGQGIAVPVGEAHRHEPPVPHDKVVVDE 510
++GPV PG DG+ P Q D +G P G P P ++
Sbjct: 1154 LQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPG----EK 1209
Query: 511 GQDREVPEENKP-PSRHAGGKAP-GVQGQMAPP----LPDSEREKQEPEQGEVGKRPGQA 564
G++ +V P P G + P G G PP EK EP + PG+A
Sbjct: 1210 GENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEA 1269
Query: 565 QALEEAGDLPEDPQKVPE-ADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGG 623
G+ E + P A G P + PGD G P V G
Sbjct: 1270 GVGGPKGERGEKGEAGPPGAAGPPGAKGP-----PGDDGPKGNPGPV--------GFPGD 1316
Query: 624 EKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQA 683
G P P G G ED D G +P P GP PP R A G Q
Sbjct: 1317 PGPPGEPGPAGQDGVGGDKGEDGDPG-QPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQG 1375
Query: 684 ASQLEGKASALQPPAS----GPGSGSPLPQPWG 712
+G+A A PP GP + P P G
Sbjct: 1376 EKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEG 1408
Score = 48.5 bits (114), Expect = 2e-05
Identities = 87/317 (27%), Positives = 111/317 (35%), Gaps = 43/317 (13%)
Query: 408 EAPGGRLGEAEGL-MKVEAARLSAQDPVVAVAEDGREKPKLPKEREELEQAQIKGPVDVP 466
+ P G +G G+ K E P E G PK ER E +A G P
Sbjct: 1239 QGPPGSVGSVGGVGEKGEPGEAGNPGPP---GEAGVGGPK--GERGEKGEAGPPGAAGPP 1293
Query: 467 GRED--GKEAPEEAQLDRPGQGIAVPVGEAHRHEP-PVPHDKVVVDEGQDREVPEENKPP 523
G + G + P+ PG + P EP P D V D+G+D + P + PP
Sbjct: 1294 GAKGPPGDDGPK----GNPGP-VGFPGDPGPPGEPGPAGQDGVGGDKGEDGD-PGQPGPP 1347
Query: 524 SRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDL----PEDPQK 579
PG G+ PP E QGE G + G+A A G P+ P
Sbjct: 1348 GPSGEAGPPGPPGKRGPP----GAAGAEGRQGEKGAK-GEAGAEGPPGKTGPVGPQGPAG 1402
Query: 580 VPEADGQPAVQ-PAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKA-KGGP------- 630
P +G + P E PG G P + GL G K KG P
Sbjct: 1403 KPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIG 1462
Query: 631 PPGNAA--------GDTGQPAEDSDHGGKPPLPAEKPAPGPGLP-PE-PREQRDVERAGG 680
PPG G G P D G P P PGLP P+ P+ + G
Sbjct: 1463 PPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAG 1522
Query: 681 NQAASQLEGKASALQPP 697
+ S L G + PP
Sbjct: 1523 QKGDSGLPGPPGSPGPP 1539
Score = 43.1 bits (100), Expect = 0.001
Identities = 93/339 (27%), Positives = 120/339 (35%), Gaps = 102/339 (30%)
Query: 466 PGREDGKEAPEE--AQLDRPGQGI-AVPVGEAHRHE-----PPVP--HDKVVVDEGQ--D 513
PG + G+ P E A+ DR G+ +P + HR E PP P D + ++G+
Sbjct: 582 PGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP 641
Query: 514 REVPEENKP-----PSRHAGGKA-PGVQGQMAPPLPDSEREKQ-EP----EQGEVGKR-- 560
R +P E P P G PG+ G PP P Q EP +QG G +
Sbjct: 642 RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 701
Query: 561 PGQAQALEEAGDLPEDPQK------VPEADGQPAVQPAKED-------LGP-GDRGL--H 604
PG + G+ + PQ +P ADG P P KE LGP G +G +
Sbjct: 702 PGPQGPIGPPGE--KGPQGKPGLAGLPGADGPPG-HPGKEGQSGEKGALGPPGPQGPIGY 758
Query: 605 PRPQAVL-SEQQNGLAVGGGEKAKGGPP----------------------------PGNA 635
P P+ V ++ GL GEK + G P P
Sbjct: 759 PGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGR 818
Query: 636 AGDTGQPAEDSDHG-----GKPPLPA---------------------EKPAPGPGLPPEP 669
AG TG P G G P LP EK A G P P
Sbjct: 819 AGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGP 878
Query: 670 REQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLP 708
R QR G++ A GK P + G G P P
Sbjct: 879 RGQRGPTGPRGSRGARGPTGKPG---PKGTSGGDGPPGP 914
Score = 39.7 bits (91), Expect = 0.011
Identities = 78/295 (26%), Positives = 104/295 (35%), Gaps = 49/295 (16%)
Query: 461 GPVDVPGREDGKEAPEEAQLDRPG-QGIAVPVGEAHRHEPPVPHDKVVVD-----EGQDR 514
GP PG+E ++ E+ L PG QG P+G P P D +G
Sbjct: 730 GPPGHPGKEG--QSGEKGALGPPGPQG---PIGY------PGPRGVKGADGVRGLKGSKG 778
Query: 515 EVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKR--PGQAQALEEAGD 572
E E+ P + G G +G++ P E + P+ G G PG + E G
Sbjct: 779 EKGEDGFPGFKGDMG-LKGDRGEVGQIGPRGEDGPEGPK-GRAGPTGDPGPSGQAGEKGK 836
Query: 573 LPEDPQKVPEADGQPAVQPAKEDLG----------PGDRGLHPRPQAVLSEQQNGLAVGG 622
L VP G P Q K G G RG+ +P G
Sbjct: 837 LG-----VPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSR 891
Query: 623 GEKAKGGPP-PGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGN 681
G + G P P +G G P + G + P PGP PP P + + G
Sbjct: 892 GARGPTGKPGPKGTSGGDGPPGPPGERGPQGP-QGPVGFPGPKGPPGPPGKDGLPGHPGQ 950
Query: 682 QAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVI--LGSPARPPFSFQPPAEQ 734
+ + +GK PP GPG P G+ I G P P PP EQ
Sbjct: 951 RGETGFQGKTG---PP--GPGGVVGPQGPTGETGPIGERGHPGPP----GPPGEQ 996
Score = 38.9 bits (89), Expect = 0.019
Identities = 51/203 (25%), Positives = 68/203 (33%), Gaps = 38/203 (18%)
Query: 523 PSRHAGGKAPGVQGQMAPPLPDSEREKQEPE--QGEVGKR-----------PGQAQALEE 569
P G + G +G+ P P R Q P G+ GKR PG+ A +
Sbjct: 540 PGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGD 599
Query: 570 AG-----DLPED--------PQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQN 616
G LP D PQ P G ++ ++GP P+ +L
Sbjct: 600 RGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLL----- 654
Query: 617 GLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHG--GKPPLPAEKPAPGPGLPPEPREQRD 674
G G P AG G P + G G+P P ++ PGP P P+
Sbjct: 655 -----GPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIG 709
Query: 675 VERAGGNQAASQLEGKASALQPP 697
G Q L G A PP
Sbjct: 710 PPGEKGPQGKPGLAGLPGADGPP 732
Score = 38.1 bits (87), Expect = 0.032
Identities = 60/229 (26%), Positives = 77/229 (33%), Gaps = 38/229 (16%)
Query: 462 PVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENK 521
P P E G P E + GE + P VV+ G E P
Sbjct: 393 PTSPPNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPA-----VVEPGMLVEGPPGPA 447
Query: 522 PPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVP 581
P+ G PG+QG PP +R G G RPG L A LP P +
Sbjct: 448 GPAGIMG--PPGLQGPTGPPGDPGDR-------GPPG-RPG----LPGADGLPGPPGTML 493
Query: 582 EADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKA-KGGPPPGNAAGDTG 640
+ +K GP + QA+L + + L G G P P G +G
Sbjct: 494 MLPFRYGGDGSK---GPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSG 550
Query: 641 QPAEDSDHGGK-------PPLPAEKPAP--------GPGLPPEPREQRD 674
E D G + PP P KP G G+P EP + D
Sbjct: 551 AKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGD 599
Score = 38.1 bits (87), Expect = 0.032
Identities = 52/183 (28%), Positives = 65/183 (35%), Gaps = 34/183 (18%)
Query: 555 GEVGKRPGQAQALEEAGDL-PEDPQKVPEADGQPAVQPAKEDL--GPGDRGLHPRPQAVL 611
G VG PG + A E+GD P+ P+ V G P +P K G RG+ P A
Sbjct: 541 GPVGG-PGSSGAKGESGDPGPQGPRGVQGPPG-PTGKPGKRGRPGADGGRGMPGEPGAKG 598
Query: 612 SEQQNGLAVGGGEKAKGGP-----PPGNAAGDTGQPAEDSDHG----------------- 649
+GL G+K G PPG GD G ED + G
Sbjct: 599 DRGFDGLPGLPGDKGHRGERGPQGPPG-PPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPR 657
Query: 650 GKPPLPAEKPAPGPGLPPEPR----EQRDVERAG--GNQAASQLEGKASALQPPASGPGS 703
G P P + G PP P+ Q + G GN L G + PP
Sbjct: 658 GTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQ 717
Query: 704 GSP 706
G P
Sbjct: 718 GKP 720
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 57.4 bits (137), Expect = 5e-08
Identities = 61/259 (23%), Positives = 83/259 (32%), Gaps = 47/259 (18%)
Query: 442 REKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPV 501
+E P PK+ + V PGR + + A + Q + +G+ H P
Sbjct: 495 KESPPKPKD-------PVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPS 547
Query: 502 PHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPL-PDSEREKQEPEQGEVGKR 560
PH + P+ PP H GG++ Q P L P P G+
Sbjct: 548 PHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQP 607
Query: 561 PGQAQALEEAG------------DLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQ 608
PGQ A + P P P P + GP P P
Sbjct: 608 PGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGP------PNPM 661
Query: 609 AVLSEQQNGLAVGG---------------GEKAKGGPPPGNAAGDTGQPAEDSDHGGKPP 653
A+ SE +GL G++ P P AG G P H G P
Sbjct: 662 ALPSE--HGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAG--GNPETAQPHAGTLP 717
Query: 654 LPAEKPAPG--PGLPPEPR 670
P P P P +PP P+
Sbjct: 718 RPRPVPKPRNRPSVPPPPQ 736
Score = 33.9 bits (76), Expect = 0.60
Identities = 47/189 (24%), Positives = 62/189 (32%), Gaps = 33/189 (17%)
Query: 559 KRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGL 618
KRP +E GDL + D A PA PG R + ++ QN
Sbjct: 480 KRPASMAVME--GDLVKKESPPKPKDPVSAAVPA-----PG------RNNSQIASGQNQP 526
Query: 619 AVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERA 678
G P NAAG S H + + PAP P P +
Sbjct: 527 QAAAGSHQLSMGQPHNAAGP-------SPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSS 579
Query: 679 GGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVI-----------LGSPARPPFS 727
G +Q L K P +G P QP +Q+ + +P PP
Sbjct: 580 GTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPP-- 637
Query: 728 FQPPAEQTP 736
QPP + TP
Sbjct: 638 PQPPTQATP 646
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 57.4 bits (137), Expect = 5e-08
Identities = 60/218 (27%), Positives = 78/218 (35%), Gaps = 32/218 (14%)
Query: 522 PPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVP 581
PP + G G PP P + E + P+ G + P E PQ
Sbjct: 53 PPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPER----PPPQGGN 108
Query: 582 EADGQPAVQPAKEDLGP---GDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPP-PGNAAG 637
++ G P P K + P G++ P P E+ GG +++G PP PG G
Sbjct: 109 QSQGTPP-PPGKPERPPPQGGNQSHRPPPPPGKPERP---PPQGGNQSQGPPPHPGKPEG 164
Query: 638 DTGQPAEDSDHG----GKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEGKASA 693
Q S GKP P ++ P PP P + + AGGN Q
Sbjct: 165 PPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQ------- 217
Query: 694 LQPPASGPGSGSPLPQPWGDAQVILGSPARPPFSFQPP 731
PPA P P PQ G P RP QPP
Sbjct: 218 -APPAGKPQGPPPPPQG--------GRPPRPAQGQQPP 246
Score = 43.5 bits (101), Expect = 8e-04
Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 20/114 (17%)
Query: 621 GGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGP--------GLPPEPREQ 672
GG + + PPPG G P + + PP P KP P G PP P +
Sbjct: 43 GGNQPQRPPPPPGK---PQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKP 99
Query: 673 RDVERAGGNQAASQLEGKASALQPPASGPG-SGSPLPQPWGDAQVILGSPARPP 725
GGNQ+ +PP G S P P P G P RPP
Sbjct: 100 ERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPP--------GKPERPP 145
Score = 42.7 bits (99), Expect = 0.001
Identities = 39/129 (30%), Positives = 44/129 (34%), Gaps = 20/129 (15%)
Query: 606 RPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGP-- 663
RP + Q GG + PPPG G Q S G PP P + P P
Sbjct: 49 RPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQ--GPPPHPGKPERPPPQG 106
Query: 664 -----GLPPEPREQRDVERAGGNQA--ASQLEGKASALQPPASGPGSGSPLPQPWGDAQV 716
G PP P + GGNQ+ GK PP G S P P P
Sbjct: 107 GNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPER-PPPQGGNQSQGPPPHP------ 159
Query: 717 ILGSPARPP 725
G P PP
Sbjct: 160 --GKPEGPP 166
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 57.0 bits (136), Expect = 7e-08
Identities = 75/275 (27%), Positives = 94/275 (34%), Gaps = 35/275 (12%)
Query: 460 KGPVDVPGREDGKEAPEEAQLDRPGQ-GIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPE 518
+GP + G++ G PG+ G P+G P P K G+D E P
Sbjct: 221 RGPQGLQGQQGGA-----GPTGPPGEPGDPGPMGPIGSRGPEGPPGK----PGEDGE-PG 270
Query: 519 ENKPPSRHAGGKAPGVQG-QMAPPLPDSEREKQ----EPEQGEVGKRPGQAQALEEAGDL 573
N P +PG +G AP LP + + E +GEVG PG G +
Sbjct: 271 RNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGA-PGSKGEAGPTGPM 329
Query: 574 ----PEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGG 629
P P+ +P G+ Q A PG RG H P L + G G
Sbjct: 330 GAMGPLGPRGMPGERGRLGPQGA-----PGQRGAHGMPGK--PGPMGPLGIPGSSGFPGN 382
Query: 630 PPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEG 689
P AG TG + G + P PGLP G A G
Sbjct: 383 PGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLP-------GAIGTDGTPGAKGPTG 435
Query: 690 KASALQPPASGPGSGSPLPQPWGDAQVILGSPARP 724
PP S GSP PQ Q I G P P
Sbjct: 436 SPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDP 470
Score = 53.5 bits (127), Expect = 7e-07
Identities = 78/289 (26%), Positives = 102/289 (35%), Gaps = 37/289 (12%)
Query: 461 GPVDVPGR-----EDGKEAPEEAQLDRPGQGIAVPVGEAHRHEPPV-PHDKVVVDEGQDR 514
GP PG E GKE P + D G VG+ PP P DK D G+D
Sbjct: 921 GPAGAPGPAGPLGEPGKEGPPGLRGDPGSHG---RVGDRGPAGPPGGPGDKG--DPGEDG 975
Query: 515 EVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDL- 573
+ P + PP G+ G +P E+ P PG+ GD
Sbjct: 976 Q-PGPDGPPGPAGTTGQRGIVG-----MPGQRGERGMPGLPGPAGTPGKVGPTGATGDKG 1029
Query: 574 PEDPQKVPEADGQPAVQPAKEDLGP-GDRGLHPRPQAVLSEQQNG----LAVGGGEKAKG 628
P P P ++G P +P E GP G+ G R AV G + G + A G
Sbjct: 1030 PPGPVGPPGSNG-PVGEPGPE--GPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPG 1086
Query: 629 GPPPGNAAGDTGQPAEDSDHG--GKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQ 686
P P A GD GQ + G G P ++ PGP P + G +
Sbjct: 1087 TPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146
Query: 687 LEGKASALQPPASGPGSGSP-LPQPWGDAQVILGSPARPPFSFQPPAEQ 734
G PP GS +P P+G P PP P ++
Sbjct: 1147 FTGLQGLPGPPGPNGEQGSAGIPGPFG--------PRGPPGPVGPSGKE 1187
Score = 44.7 bits (104), Expect = 3e-04
Identities = 49/165 (29%), Positives = 58/165 (35%), Gaps = 37/165 (22%)
Query: 529 GKAPGVQGQMAPPLPDSEREKQEP--EQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQ 586
G P V G P P Q P E+G G RPG P PQ + DG+
Sbjct: 119 GLVPVVTGIRGRPGPAGPPGSQGPRGERGPKG-RPG-----------PRGPQGI---DGE 163
Query: 587 PAVQPAKEDLGPGDRGLHPRPQAV---LSEQQNGLAVGGGEKAKGGPPPGNA-------- 635
P V GP HP P + S Q GL G ++ G PG+
Sbjct: 164 PGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGP 223
Query: 636 ---------AGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPRE 671
AG TG P E D G P+ + P PG P E E
Sbjct: 224 QGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGE 268
Score = 42.7 bits (99), Expect = 0.001
Identities = 80/299 (26%), Positives = 101/299 (33%), Gaps = 50/299 (16%)
Query: 459 IKGPVDVPGREDGKEAP--EEAQLDRPG----------------QGIAVPVGEAHRHEPP 500
I+GP+ PG E+GK P + + PG G+ P G A P
Sbjct: 490 IQGPIGPPG-EEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKG-AQGERGP 547
Query: 501 VPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAP--PLPDSEREKQEPEQGEVG 558
V +G E P +R G PGVQG PL + + G +G
Sbjct: 548 VGSSGPKGSQGDPGRPGEPGLPGARGLTGN-PGVQGPEGKLGPLGAPGEDGRPGPPGSIG 606
Query: 559 KRPGQAQALEEAGDLPE--DPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQN 616
R GQ ++ G DP K EA G V PG RG + V
Sbjct: 607 IR-GQPGSMGLPGPKGSSGDPGKPGEA-GNAGV--------PGQRGAPGKDGEVGPSGPV 656
Query: 617 GLAVGGGEKAKGGPP-PGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDV 675
G GE+ + GPP P G G P + GGKP PG P PR +R
Sbjct: 657 GPPGLAGERGEQGPPGPTGFQGLPGPPGPPGE-GGKPGDQGVPGDPGAVGPLGPRGERGN 715
Query: 676 ERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPARPPFSFQPPAEQ 734
G + L G+ A G G P P P+ P PP Q
Sbjct: 716 PGERGEPGITGLPGEKGM----AGGHGPDGPKGSP---------GPSGTPGDTGPPGLQ 761
Score = 35.0 bits (79), Expect = 0.27
Identities = 64/241 (26%), Positives = 80/241 (33%), Gaps = 27/241 (11%)
Query: 471 GKEAPEEAQLDRPG-QGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGG 529
G E P+ ++ PG +G A P G P P G+ + + P R A G
Sbjct: 306 GLEGPK-GEVGAPGSKGEAGPTGPMGAMGPLGPRGM----PGERGRLGPQGAPGQRGAHG 360
Query: 530 KAPGVQGQMAP-PLPDSEREKQEPE-QGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQP 587
PG G M P +P S P +GE G + PE PQ G P
Sbjct: 361 M-PGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARG---------PEGPQGQRGETGPP 410
Query: 588 AVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPP--PGNAAGDTGQPAED 645
P PG G P A + G G GPP PG G TG P
Sbjct: 411 G--PVGSPGLPGAIGTDGTPGA---KGPTGSPGTSGPPGSAGPPGSPG-PQGSTG-PQGI 463
Query: 646 SDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEGKASALQPPASGPGSGS 705
G P +P K GP P P + G + G + PP G+
Sbjct: 464 RGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGA 523
Query: 706 P 706
P
Sbjct: 524 P 524
Score = 30.8 bits (68), Expect = 5.0
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 630 PPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPP---EPREQRDVERAGGNQAASQ 686
P GN G+ + + G P + + PGP PP PR +R + G +
Sbjct: 100 PGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQG 159
Query: 687 LEGKASAL-QPPASGPGSGSPLPQPWG 712
++G+ QP A GP P P G
Sbjct: 160 IDGEPGVPGQPGAPGPPGHPSHPGPDG 186
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 56.6 bits (135), Expect = 9e-08
Identities = 78/293 (26%), Positives = 104/293 (35%), Gaps = 53/293 (18%)
Query: 456 QAQIKGPVDVPGRED--GKEAPEEAQLDRPGQGIAVPVGEAHRHEPPVPHDKVVVDEGQD 513
Q IKG PG G P+ +R +GI P +P +P K +
Sbjct: 230 QPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPG---- 285
Query: 514 REVPEENKPPSRHAGGKA--PGVQGQMAPP-LPDSEREKQEPEQGEVGKRPGQAQALEEA 570
P PP GK PG++G+ P LP K E QG G PG+
Sbjct: 286 --APGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGE--QGPAGL-PGKPGLTGPP 340
Query: 571 GDL-PEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGG 629
G++ P+ P+ +P + G P K + GP +P G + +G
Sbjct: 341 GNMGPQGPKGIPGSHGLPG---PKGETGPAGPAGYP----------------GAKGERGS 381
Query: 630 PPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPP------EPREQRDV---ERAGG 680
P G G+P D G P LP K PG G PP P + + G
Sbjct: 382 PGSDGKPGYPGKPGLDGPKGN-PGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAG 440
Query: 681 NQAASQLEGKASALQPPA--------SGPGSGSPLPQPWGDAQVILGSPARPP 725
+ A + G + PP PGS P P P G A L P PP
Sbjct: 441 PRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGP-PGPAGIATKGLNGPTGPP 492
Score = 46.2 bits (108), Expect = 1e-04
Identities = 61/232 (26%), Positives = 80/232 (34%), Gaps = 37/232 (15%)
Query: 485 QGIAVPVGEAHRHEPPVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPD 544
+GIAV GE PP P R P + PP + G +PG+QG+ P P
Sbjct: 51 KGIAVR-GEQGTPGPPGP--------AGPRGHPGPSGPPGKPGYG-SPGLQGEPGLPGPP 100
Query: 545 SEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGDRGLH 604
+P + +PG+ GD+ P +P G P GP +
Sbjct: 101 GPSAVGKPGVPGLPGKPGERGPYGPKGDV--GPAGLPGPRGPPGPPGIP---GPAGISVP 155
Query: 605 PRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHG-------GKPPLPAE 657
+P G + G P P G+ G P +G G P P E
Sbjct: 156 GKP--------------GQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGE 201
Query: 658 KPAPGPGLPPEPREQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQ 709
+ PGP P P V + G N Q K P GP G P PQ
Sbjct: 202 RGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGP-IGPPGPQ 252
Score = 34.3 bits (77), Expect = 0.46
Identities = 67/245 (27%), Positives = 86/245 (35%), Gaps = 48/245 (19%)
Query: 441 GREKPKLPKEREELEQAQIKGPVDVPGREDGKEAPEEAQLDRPGQ-GIAVPVGEAHRHEP 499
G KP LP + E +GP +PG K E+ PG+ G+ P G
Sbjct: 297 GFGKPGLPGLKGE------RGPAGLPGGPGAKG--EQGPAGLPGKPGLTGPPGNMG---- 344
Query: 500 PVPHDKVVVDEGQDREVPEENKPPSRHAGGKAPGVQGQMAPPLPDSEREKQEPEQGEVGK 559
P + P+ P+ AG PG +G+ P D + G GK
Sbjct: 345 --PQGPKGIPGSHGLPGPKGETGPAGPAG--YPGAKGERGSPGSDGK-------PGYPGK 393
Query: 560 RPGQAQALEEAGDLPEDPQKVPEADGQPA----VQPAKEDLGPGDRG-LHPRPQAVLSEQ 614
PG G LP P+ P G P V PA PG G PR +
Sbjct: 394 -PGLDGPKGNPG-LP-GPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGT 450
Query: 615 QNGLA---VGGGEKAKGGP----PPGNAA-------GDTGQPAEDSD--HGGKPPLPAEK 658
+ + + G +KG P PPG A G TG P H G+P LP
Sbjct: 451 RGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPP 510
Query: 659 PAPGP 663
PGP
Sbjct: 511 GPPGP 515
Score = 33.1 bits (74), Expect = 1.0
Identities = 37/136 (27%), Positives = 47/136 (34%), Gaps = 15/136 (11%)
Query: 614 QQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHG-GKPPLPAEKPAPG---------- 662
+ G+AV G + G P P G G G G P L E PG
Sbjct: 49 KSKGIAVRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKP 108
Query: 663 --PGLPPEPREQRDVERAGGNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGS 720
PGLP +P E R G+ + L G PP +G +P G Q G+
Sbjct: 109 GVPGLPGKPGE-RGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQ-QGPTGA 166
Query: 721 PARPPFSFQPPAEQTP 736
P F + A P
Sbjct: 167 PGPRGFPGEKGAPGVP 182
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,179,495
Number of Sequences: 37866
Number of extensions: 2179606
Number of successful extensions: 18781
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 1416
Number of HSP's that attempted gapping in prelim test: 12341
Number of HSP's gapped (non-prelim): 5164
length of query: 780
length of database: 18,247,518
effective HSP length: 110
effective length of query: 670
effective length of database: 14,082,258
effective search space: 9435112860
effective search space used: 9435112860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.