Guide to the Human Genome
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Name: SLC38A2 Sequence: fasta or formatted (506aa) NCBI GI: 21361602
Description:

solute carrier family 38, member 2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         34           2
 C cysteine            1.2          6           1
 D aspartate           2.4         12           1
 E glutamate           3.8         19           2
 F phenylalanine       6.7         34           2
 G glycine             5.9         30           3
 H histidine           2.4         12           1
 I isoleucine          7.7         39           2
 K lysine              4.3         22           3
 L leucine            14.6         74           3
 M methionine          3.2         16           2
 N asparagine          4.3         22           1
 P proline             4.0         20           1
 Q glutamine           1.8          9           1
 R arginine            2.2         11           3
 S serine              9.9         50           3
 T threonine           5.5         28           2
 V valine              8.1         41           2
 W tryptophan          0.8          4           2
 Y tyrosine            4.5         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 38, member 2 
SLC38A4               0.592   solute carrier family 38, member 4 
SLC38A4               0.592   solute carrier family 38, member 4 
SLC38A3               0.491   solute carrier family 38, member 3 
SLC38A1               0.456   amino acid transporter system A1 
SLC38A1               0.456   amino acid transporter system A1 
SLC38A5               0.411   solute carrier family 38, member 5 
SLC38A6               0.367   solute carrier family 38, member 6 
SLC38A10              0.105   solute carrier family 38, member 10 isoform a 
SLC38A10              0.105   solute carrier family 38, member 10 isoform b 
SLC38A8               0.084   solute carrier family 38, member 8 
SLC38A7               0.083   solute carrier family 38, member 7 
SLC38A11              0.074   solute carrier family 38, member 11 
SLC32A1               0.031   solute carrier family 32, member 1 
SLC36A2               0.031   solute carrier family 36, member 2 
SLC36A1               0.023   solute carrier family 36 member 1 
SLC36A3               0.021   solute carrier family 36, member 3 isoform 2 
SLC36A4               0.021   solute carrier family 36 (proton/amino acid symporte...
SLC38A9               0.015   solute carrier family 38, member 9 
SLC36A3               0.011   solute carrier family 36, member 3 isoform 1 
OR56B1                0.007   olfactory receptor, family 56, subfamily B, member 1...
SLC4A4                0.006   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A4                0.006   solute carrier family 4, sodium bicarbonate cotranspo...
SLC4A4                0.006   solute carrier family 4, sodium bicarbonate cotrans...
OR52E8                0.005   olfactory receptor, family 52, subfamily E, member 8...
C20orf26              0.004   hypothetical protein LOC26074 
WWC2                  0.004   WW and C2 domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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