Guide to the Human Genome
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Name: SLC38A3 Sequence: fasta or formatted (504aa) NCBI GI: 5870893
Description:

solute carrier family 38, member 3

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         38           3
 C cysteine            1.6          8           1
 D aspartate           1.4          7           1
 E glutamate           4.6         23           2
 F phenylalanine       7.1         36           2
 G glycine             6.2         31           2
 H histidine           2.2         11           1
 I isoleucine          8.1         41           3
 K lysine              4.0         20           3
 L leucine            13.1         66           3
 M methionine          4.0         20           1
 N asparagine          4.0         20           2
 P proline             6.0         30           2
 Q glutamine           2.8         14           2
 R arginine            2.4         12           2
 S serine              7.7         39           2
 T threonine           5.8         29           2
 V valine              7.1         36           2
 W tryptophan          0.6          3           1
 Y tyrosine            4.0         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 38, member 3 
SLC38A5               0.531   solute carrier family 38, member 5 
SLC38A4               0.490   solute carrier family 38, member 4 
SLC38A4               0.490   solute carrier family 38, member 4 
SLC38A2               0.488   solute carrier family 38, member 2 
SLC38A1               0.422   amino acid transporter system A1 
SLC38A1               0.422   amino acid transporter system A1 
SLC38A6               0.383   solute carrier family 38, member 6 
SLC38A10              0.083   solute carrier family 38, member 10 isoform a 
SLC38A10              0.083   solute carrier family 38, member 10 isoform b 
SLC38A8               0.080   solute carrier family 38, member 8 
SLC38A11              0.078   solute carrier family 38, member 11 
SLC38A7               0.072   solute carrier family 38, member 7 
SLC36A2               0.034   solute carrier family 36, member 2 
SLC36A4               0.033   solute carrier family 36 (proton/amino acid symporte...
SLC38A9               0.033   solute carrier family 38, member 9 
SLC36A1               0.023   solute carrier family 36 member 1 
SLC36A3               0.022   solute carrier family 36, member 3 isoform 2 
SLC32A1               0.022   solute carrier family 32, member 1 
SLC36A3               0.014   solute carrier family 36, member 3 isoform 1 
GPR148                0.010   G protein-coupled receptor 148 
SLC7A4                0.008   solute carrier family 7 (cationic amino acid transp...
GPRC5A                0.007   G protein-coupled receptor, family C, group 5, member...
HRH2                  0.006   histamine receptor H2 isoform 1 
HRH2                  0.006   histamine receptor H2 isoform 2 
KIDINS220             0.006   kinase D-interacting substrate of 220 kDa 
HMCN1                 0.005   hemicentin 1 
PRRT3                 0.005   proline-rich transmembrane protein 3 
GPR141                0.004   G protein-coupled receptor 141 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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