Guide to the Human Genome
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Name: SLC38A4 Sequence: fasta or formatted (547aa) NCBI GI: 219689132
Description:

solute carrier family 38, member 4

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [547aa] solute carrier family 38, member 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         35           2
 C cysteine            0.7          4           1
 D aspartate           3.5         19           2
 E glutamate           4.9         27           2
 F phenylalanine       6.4         35           2
 G glycine             6.8         37           2
 H histidine           2.4         13           2
 I isoleucine          8.8         48           3
 K lysine              4.9         27           3
 L leucine            12.2         67           3
 M methionine          4.0         22           2
 N asparagine          4.8         26           2
 P proline             4.9         27           2
 Q glutamine           1.3          7           1
 R arginine            2.2         12           2
 S serine              8.6         47           3
 T threonine           4.4         24           2
 V valine              7.5         41           2
 W tryptophan          0.7          4           1
 Y tyrosine            4.6         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 38, member 4 
SLC38A4               1.000   solute carrier family 38, member 4 
SLC38A2               0.540   solute carrier family 38, member 2 
SLC38A3               0.450   solute carrier family 38, member 3 
SLC38A1               0.420   amino acid transporter system A1 
SLC38A1               0.420   amino acid transporter system A1 
SLC38A5               0.377   solute carrier family 38, member 5 
SLC38A6               0.331   solute carrier family 38, member 6 
SLC38A11              0.051   solute carrier family 38, member 11 
SLC38A10              0.044   solute carrier family 38, member 10 isoform a 
SLC38A10              0.044   solute carrier family 38, member 10 isoform b 
SLC38A8               0.033   solute carrier family 38, member 8 
SLC36A4               0.027   solute carrier family 36 (proton/amino acid symporte...
SLC38A7               0.026   solute carrier family 38, member 7 
SLC36A1               0.024   solute carrier family 36 member 1 
SLC32A1               0.019   solute carrier family 32, member 1 
SLC36A2               0.019   solute carrier family 36, member 2 
SLC36A3               0.018   solute carrier family 36, member 3 isoform 1 
SLC36A3               0.018   solute carrier family 36, member 3 isoform 2 
SLC38A9               0.012   solute carrier family 38, member 9 
ABCA5                 0.009   ATP-binding cassette, sub-family A , member 5 
ABCA5                 0.009   ATP-binding cassette, sub-family A , member 5 
EFNB2                 0.008   ephrin B2 
NIPAL4                0.008   ichthyin protein 
PRUNE2                0.007   prune homolog 2 
FFAR3                 0.007   free fatty acid receptor 3 
NPTN                  0.005   neuroplastin isoform a precursor 
NPTN                  0.005   neuroplastin isoform b precursor 
CLDN8                 0.005   claudin 8 
CHRNA1                0.005   nicotinic cholinergic receptor alpha 1 isoform b prec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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