Guide to the Human Genome
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Name: KRT27 Sequence: fasta or formatted (459aa) NCBI GI: 153945736
Description:

keratin 27

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         37           2
 C cysteine            2.4         11           1
 D aspartate           4.4         20           2
 E glutamate          10.2         47           3
 F phenylalanine       2.2         10           1
 G glycine             9.6         44           3
 H histidine           2.0          9           1
 I isoleucine          3.9         18           2
 K lysine              5.2         24           2
 L leucine            10.9         50           2
 M methionine          1.3          6           1
 N asparagine          5.9         27           2
 P proline             1.3          6           1
 Q glutamine           5.0         23           3
 R arginine            4.8         22           2
 S serine              8.9         41           3
 T threonine           6.1         28           2
 V valine              5.0         23           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 27 
KRT25                 0.785   keratin 25 
KRT28                 0.762   keratin 25D 
KRT26                 0.692   keratin 26 
KRT24                 0.503   keratin 24 
KRT10                 0.493   keratin 10 
KRT12                 0.478   keratin 12 
KRT14                 0.456   keratin 14 
KRT17                 0.449   keratin 17 
KRT16                 0.449   keratin 16 
KRT13                 0.446   keratin 13 isoform a 
KRT15                 0.442   keratin 15 
KRT13                 0.442   keratin 13 isoform b 
KRT19                 0.410   keratin 19 
KRT9                  0.359   keratin 9 
KRT36                 0.357   keratin 36 
KRT20                 0.345   keratin 20 
KRT35                 0.337   keratin 35 
KRT32                 0.323   keratin 32 
KRT33A                0.319   keratin 33A 
KRT31                 0.312   keratin 31 
KRT33B                0.310   type I hair keratin 3B 
KRT34                 0.298   keratin 34 
KRT40                 0.296   type I hair keratin KA36 
KRT23                 0.294   keratin 23 
KRT18                 0.290   keratin 18 
KRT18                 0.290   keratin 18 
KRT39                 0.285   type I hair keratin KA35 
KRT37                 0.262   keratin 37 
KRT38                 0.260   keratin 38 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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