Guide to the Human Genome
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Name: KRT19 Sequence: fasta or formatted (400aa) NCBI GI: 24234699
Description:

keratin 19

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         36           2
 C cysteine            0.0          0           0
 D aspartate           5.8         23           2
 E glutamate           9.2         37           3
 F phenylalanine       2.0          8           1
 G glycine             9.0         36           3
 H histidine           1.5          6           1
 I isoleucine          4.2         17           1
 K lysine              3.5         14           2
 L leucine            11.0         44           2
 M methionine          2.2          9           1
 N asparagine          3.2         13           2
 P proline             1.2          5           1
 Q glutamine           6.2         25           1
 R arginine            7.8         31           2
 S serine              9.8         39           5
 T threonine           5.2         21           2
 V valine              5.0         20           1
 W tryptophan          0.5          2           1
 Y tyrosine            3.5         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 19 
KRT15                 0.631   keratin 15 
KRT17                 0.629   keratin 17 
KRT16                 0.618   keratin 16 
KRT14                 0.615   keratin 14 
KRT13                 0.599   keratin 13 isoform b 
KRT13                 0.599   keratin 13 isoform a 
KRT10                 0.548   keratin 10 
KRT12                 0.546   keratin 12 
KRT24                 0.504   keratin 24 
KRT36                 0.496   keratin 36 
KRT27                 0.485   keratin 27 
KRT35                 0.477   keratin 35 
KRT20                 0.475   keratin 20 
KRT28                 0.471   keratin 25D 
KRT9                  0.461   keratin 9 
KRT25                 0.461   keratin 25 
KRT32                 0.453   keratin 32 
KRT31                 0.449   keratin 31 
KRT33A                0.449   keratin 33A 
KRT33B                0.448   type I hair keratin 3B 
KRT34                 0.442   keratin 34 
KRT26                 0.433   keratin 26 
KRT18                 0.414   keratin 18 
KRT18                 0.414   keratin 18 
KRT40                 0.403   type I hair keratin KA36 
KRT23                 0.395   keratin 23 
KRT39                 0.391   type I hair keratin KA35 
KRT38                 0.383   keratin 38 
KRT37                 0.375   keratin 37 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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