Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KRT31 Sequence: fasta or formatted (416aa) NCBI GI: 14917115
Description:

keratin 31

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         22           2
 C cysteine            6.0         25           1
 D aspartate           3.6         15           2
 E glutamate          10.8         45           2
 F phenylalanine       1.9          8           1
 G glycine             1.7          7           1
 H histidine           0.7          3           1
 I isoleucine          3.4         14           2
 K lysine              2.9         12           1
 L leucine            12.5         52           2
 M methionine          0.5          2           1
 N asparagine          7.2         30           1
 P proline             5.3         22           2
 Q glutamine           7.2         30           3
 R arginine            7.2         30           2
 S serine              9.6         40           3
 T threonine           5.8         24           2
 V valine              5.5         23           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 31 
KRT33B                0.894   type I hair keratin 3B 
KRT33A                0.887   keratin 33A 
KRT34                 0.816   keratin 34 
KRT35                 0.657   keratin 35 
KRT36                 0.644   keratin 36 
KRT32                 0.643   keratin 32 
KRT38                 0.575   keratin 38 
KRT40                 0.554   type I hair keratin KA36 
KRT37                 0.552   keratin 37 
KRT39                 0.535   type I hair keratin KA35 
KRT14                 0.437   keratin 14 
KRT16                 0.428   keratin 16 
KRT17                 0.426   keratin 17 
KRT19                 0.410   keratin 19 
KRT15                 0.410   keratin 15 
KRT13                 0.400   keratin 13 isoform a 
KRT13                 0.399   keratin 13 isoform b 
KRT10                 0.377   keratin 10 
KRT12                 0.373   keratin 12 
KRT20                 0.351   keratin 20 
KRT27                 0.337   keratin 27 
KRT24                 0.333   keratin 24 
KRT28                 0.333   keratin 25D 
KRT18                 0.328   keratin 18 
KRT18                 0.328   keratin 18 
KRT25                 0.326   keratin 25 
KRT9                  0.300   keratin 9 
KRT23                 0.296   keratin 23 
KRT26                 0.296   keratin 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press