Guide to the Human Genome
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Name: KRT26 Sequence: fasta or formatted (468aa) NCBI GI: 31559815
Description:

keratin 26

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         29           2
 C cysteine            2.8         13           1
 D aspartate           4.7         22           2
 E glutamate          11.3         53           3
 F phenylalanine       1.9          9           1
 G glycine             7.7         36           3
 H histidine           2.4         11           2
 I isoleucine          4.3         20           1
 K lysine              4.9         23           2
 L leucine            10.9         51           2
 M methionine          1.5          7           1
 N asparagine          5.8         27           2
 P proline             1.1          5           1
 Q glutamine           5.3         25           3
 R arginine            5.3         25           2
 S serine              9.4         44           2
 T threonine           6.0         28           2
 V valine              5.3         25           2
 W tryptophan          0.2          1           1
 Y tyrosine            3.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 26 
KRT27                 0.677   keratin 27 
KRT25                 0.649   keratin 25 
KRT28                 0.647   keratin 25D 
KRT24                 0.436   keratin 24 
KRT10                 0.434   keratin 10 
KRT12                 0.411   keratin 12 
KRT16                 0.401   keratin 16 
KRT14                 0.392   keratin 14 
KRT15                 0.390   keratin 15 
KRT13                 0.380   keratin 13 isoform b 
KRT13                 0.380   keratin 13 isoform a 
KRT17                 0.377   keratin 17 
KRT19                 0.358   keratin 19 
KRT9                  0.324   keratin 9 
KRT36                 0.303   keratin 36 
KRT20                 0.294   keratin 20 
KRT35                 0.290   keratin 35 
KRT32                 0.273   keratin 32 
KRT23                 0.271   keratin 23 
KRT33A                0.269   keratin 33A 
KRT31                 0.269   keratin 31 
KRT40                 0.264   type I hair keratin KA36 
KRT33B                0.264   type I hair keratin 3B 
KRT18                 0.260   keratin 18 
KRT18                 0.260   keratin 18 
KRT34                 0.259   keratin 34 
KRT39                 0.248   type I hair keratin KA35 
KRT37                 0.241   keratin 37 
KRT38                 0.238   keratin 38 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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