Guide to the Human Genome
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Name: KRT36 Sequence: fasta or formatted (467aa) NCBI GI: 4504927
Description:

keratin 36

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         30           2
 C cysteine            4.3         20           2
 D aspartate           3.9         18           2
 E glutamate          10.7         50           3
 F phenylalanine       2.1         10           1
 G glycine             5.1         24           2
 H histidine           1.1          5           1
 I isoleucine          5.1         24           2
 K lysine              3.6         17           2
 L leucine            10.9         51           2
 M methionine          1.3          6           1
 N asparagine          3.9         18           2
 P proline             4.3         20           2
 Q glutamine           6.9         32           2
 R arginine            6.6         31           2
 S serine              8.8         41           3
 T threonine           5.4         25           1
 V valine              6.4         30           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 36 
KRT35                 0.634   keratin 35 
KRT32                 0.594   keratin 32 
KRT31                 0.581   keratin 31 
KRT33A                0.562   keratin 33A 
KRT33B                0.555   type I hair keratin 3B 
KRT34                 0.550   keratin 34 
KRT40                 0.519   type I hair keratin KA36 
KRT39                 0.514   type I hair keratin KA35 
KRT38                 0.481   keratin 38 
KRT37                 0.468   keratin 37 
KRT14                 0.462   keratin 14 
KRT17                 0.449   keratin 17 
KRT16                 0.449   keratin 16 
KRT15                 0.414   keratin 15 
KRT19                 0.408   keratin 19 
KRT13                 0.389   keratin 13 isoform a 
KRT13                 0.389   keratin 13 isoform b 
KRT10                 0.369   keratin 10 
KRT12                 0.359   keratin 12 
KRT28                 0.351   keratin 25D 
KRT20                 0.350   keratin 20 
KRT27                 0.348   keratin 27 
KRT24                 0.338   keratin 24 
KRT25                 0.334   keratin 25 
KRT18                 0.318   keratin 18 
KRT18                 0.318   keratin 18 
KRT9                  0.307   keratin 9 
KRT26                 0.301   keratin 26 
KRT23                 0.291   keratin 23 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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