Guide to the Human Genome
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Name: KRT34 Sequence: fasta or formatted (436aa) NCBI GI: 14917119
Description:

keratin 34

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         22           1
 C cysteine            5.7         25           2
 D aspartate           3.4         15           2
 E glutamate          10.8         47           3
 F phenylalanine       1.6          7           1
 G glycine             2.8         12           1
 H histidine           1.4          6           1
 I isoleucine          4.6         20           2
 K lysine              4.1         18           2
 L leucine            12.4         54           2
 M methionine          0.7          3           1
 N asparagine          6.7         29           1
 P proline             3.7         16           3
 Q glutamine           7.8         34           3
 R arginine            6.2         27           2
 S serine              9.9         43           3
 T threonine           5.5         24           2
 V valine              4.8         21           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 34 
KRT33A                0.789   keratin 33A 
KRT33B                0.784   type I hair keratin 3B 
KRT31                 0.783   keratin 31 
KRT35                 0.597   keratin 35 
KRT36                 0.585   keratin 36 
KRT32                 0.582   keratin 32 
KRT40                 0.553   type I hair keratin KA36 
KRT38                 0.528   keratin 38 
KRT37                 0.518   keratin 37 
KRT39                 0.495   type I hair keratin KA35 
KRT17                 0.407   keratin 17 
KRT14                 0.406   keratin 14 
KRT16                 0.397   keratin 16 
KRT19                 0.387   keratin 19 
KRT15                 0.386   keratin 15 
KRT13                 0.373   keratin 13 isoform a 
KRT13                 0.370   keratin 13 isoform b 
KRT10                 0.344   keratin 10 
KRT12                 0.340   keratin 12 
KRT20                 0.336   keratin 20 
KRT27                 0.309   keratin 27 
KRT24                 0.309   keratin 24 
KRT28                 0.303   keratin 25D 
KRT18                 0.293   keratin 18 
KRT18                 0.293   keratin 18 
KRT25                 0.292   keratin 25 
KRT9                  0.284   keratin 9 
KRT23                 0.279   keratin 23 
KRT26                 0.273   keratin 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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