Guide to the Human Genome
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Name: KRT35 Sequence: fasta or formatted (455aa) NCBI GI: 94538345
Description:

keratin 35

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         37           2
 C cysteine            5.1         23           1
 D aspartate           4.4         20           2
 E glutamate          10.3         47           3
 F phenylalanine       1.5          7           1
 G glycine             5.3         24           4
 H histidine           0.4          2           1
 I isoleucine          2.9         13           2
 K lysine              3.7         17           2
 L leucine            11.9         54           2
 M methionine          1.8          8           1
 N asparagine          4.2         19           2
 P proline             4.4         20           2
 Q glutamine           5.7         26           2
 R arginine            7.0         32           2
 S serine             10.8         49           4
 T threonine           4.0         18           1
 V valine              5.1         23           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 35 
KRT36                 0.649   keratin 36 
KRT32                 0.610   keratin 32 
KRT31                 0.607   keratin 31 
KRT33A                0.584   keratin 33A 
KRT34                 0.575   keratin 34 
KRT33B                0.571   type I hair keratin 3B 
KRT40                 0.531   type I hair keratin KA36 
KRT39                 0.494   type I hair keratin KA35 
KRT38                 0.488   keratin 38 
KRT37                 0.471   keratin 37 
KRT14                 0.436   keratin 14 
KRT17                 0.432   keratin 17 
KRT16                 0.426   keratin 16 
KRT15                 0.406   keratin 15 
KRT19                 0.402   keratin 19 
KRT13                 0.399   keratin 13 isoform a 
KRT13                 0.395   keratin 13 isoform b 
KRT10                 0.373   keratin 10 
KRT12                 0.365   keratin 12 
KRT20                 0.348   keratin 20 
KRT24                 0.341   keratin 24 
KRT27                 0.336   keratin 27 
KRT28                 0.333   keratin 25D 
KRT25                 0.320   keratin 25 
KRT9                  0.311   keratin 9 
KRT18                 0.310   keratin 18 
KRT18                 0.310   keratin 18 
KRT23                 0.298   keratin 23 
KRT26                 0.295   keratin 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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