Guide to the Human Genome
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Name: KIRREL2 Sequence: fasta or formatted (583aa) NCBI GI: 145275172
Description:

kin of IRRE-like 2 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {633aa} kin of IRRE-like 2 isoform a
alt prot {708aa} kin of IRRE-like 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         59           3
 C cysteine            2.1         12           2
 D aspartate           4.1         24           2
 E glutamate           5.8         34           4
 F phenylalanine       3.3         19           1
 G glycine            10.1         59           2
 H histidine           1.9         11           1
 I isoleucine          2.1         12           1
 K lysine              1.7         10           1
 L leucine            10.3         60           2
 M methionine          0.7          4           1
 N asparagine          2.1         12           1
 P proline             8.1         47           2
 Q glutamine           3.3         19           1
 R arginine            7.5         44           2
 S serine              9.4         55           3
 T threonine           6.3         37           3
 V valine              8.2         48           2
 W tryptophan          1.7         10           1
 Y tyrosine            1.2          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kin of IRRE-like 2 isoform b 
KIRREL2               0.979   kin of IRRE-like 2 isoform a 
KIRREL2               0.938   kin of IRRE-like 2 isoform c 
KIRREL3               0.326   kin of IRRE like 3 isoform 1 
KIRREL                0.319   kin of IRRE like 
KIRREL3               0.312   kin of IRRE like 3 isoform 2 
LOC100292387          0.077   PREDICTED: similar to hemicentin 2 
HMCN2                 0.077   PREDICTED: hemicentin 2 
HMCN2                 0.075   PREDICTED: hemicentin 2 
HMCN1                 0.074   hemicentin 1 
HMCN2                 0.067   PREDICTED: hemicentin 2 
LOC100289200          0.065   PREDICTED: hypothetical protein XP_002342997 
HSPG2                 0.064   heparan sulfate proteoglycan 2 
ROBO1                 0.062   roundabout 1 isoform b 
ROBO1                 0.062   roundabout 1 isoform a 
NPHS1                 0.062   nephrin precursor 
CADM4                 0.060   cell adhesion molecule 4 
ROBO1                 0.058   roundabout 1 isoform d 
ROBO1                 0.058   roundabout 1 isoform c 
LOC642132             0.058   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.058   PREDICTED: similar to roundabout 1 isoform 2 
PXDN                  0.056   peroxidasin 
SIGLEC1               0.056   sialoadhesin precursor 
MAG                   0.052   myelin associated glycoprotein isoform a precursor [...
ROBO2                 0.051   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.051   roundabout, axon guidance receptor, homolog 2 isofor...
MAG                   0.051   myelin associated glycoprotein isoform b precursor [...
PTK7                  0.051   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.051   PTK7 protein tyrosine kinase 7 isoform d precursor [...
PTK7                  0.051   PTK7 protein tyrosine kinase 7 isoform b precursor [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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