TAPBPL 6373

Name: TAPBPL	Sequence: fasta or formatted (468aa)		NCBI GI: 157739930
Description: TAP binding protein-like		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.3 48 2 C cysteine 2.1 10 1 D aspartate 4.3 20 2 E glutamate 5.3 25 2 F phenylalanine 2.8 13 1 G glycine 7.9 37 3 H histidine 1.7 8 1 I isoleucine 3.6 17 2 K lysine 2.1 10 1 L leucine 12.6 59 3 M methionine 1.9 9 1 N asparagine 1.1 5 1 P proline 5.1 24 2 Q glutamine 7.1 33 2 R arginine 4.7 22 2 S serine 9.4 44 3 T threonine 8.1 38 2 V valine 6.4 30 3 W tryptophan 1.7 8 1 Y tyrosine 1.7 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TAP binding protein-like TAPBP 0.058 tapasin isoform 1 precursor TAPBP 0.054 tapasin isoform 3 precursor CD276 0.048 CD276 antigen isoform a PVR 0.040 poliovirus receptor isoform delta PVR 0.040 poliovirus receptor isoform gamma PVR 0.040 poliovirus receptor isoform beta PVR 0.040 poliovirus receptor isoform alpha CD276 0.039 CD276 antigen isoform b PVRL2 0.031 poliovirus receptor related 2 isoform alpha precursor... PVRL2 0.031 poliovirus receptor related 2 isoform delta precurs... HFE 0.028 hemochromatosis protein isoform 9 precursor HFE 0.028 hemochromatosis protein isoform 7 precursor HFE 0.028 hemochromatosis protein isoform 1 precursor HFE 0.028 hemochromatosis protein isoform 10 precursor LOC100290481 0.028 PREDICTED: hypothetical protein XP_002348153 HFE 0.027 hemochromatosis protein isoform 4 precursor HFE 0.027 hemochromatosis protein isoform 3 precursor HLA-DRB5 0.027 major histocompatibility complex, class II, DR beta ... LOC100294275 0.026 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.026 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.026 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.026 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.026 PREDICTED: similar to major histocompatibility comp... VTCN1 0.026 V-set domain containing T cell activation inhibitor ... MCAM 0.024 melanoma cell adhesion molecule HFE 0.024 hemochromatosis protein isoform 8 precursor HFE 0.024 hemochromatosis protein isoform 6 precursor LOC100293977 0.024 PREDICTED: similar to major histocompatibility comp... LOC100294036 0.024 PREDICTED: similar to HLA class II histocompatibili... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.