Guide to the Human Genome
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Name: KIRREL2 Sequence: fasta or formatted (633aa) NCBI GI: 145275170
Description:

kin of IRRE-like 2 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {583aa} kin of IRRE-like 2 isoform b
alt prot {708aa} kin of IRRE-like 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         63           3
 C cysteine            2.1         13           2
 D aspartate           4.1         26           2
 E glutamate           5.8         37           4
 F phenylalanine       3.2         20           1
 G glycine            10.4         66           2
 H histidine           1.9         12           1
 I isoleucine          1.9         12           1
 K lysine              1.7         11           1
 L leucine            11.1         70           2
 M methionine          0.6          4           1
 N asparagine          1.9         12           1
 P proline             8.2         52           2
 Q glutamine           3.6         23           2
 R arginine            7.3         46           2
 S serine              9.0         57           3
 T threonine           6.0         38           3
 V valine              8.1         51           2
 W tryptophan          1.9         12           1
 Y tyrosine            1.3          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kin of IRRE-like 2 isoform a 
KIRREL2               0.962   kin of IRRE-like 2 isoform c 
KIRREL2               0.898   kin of IRRE-like 2 isoform b 
KIRREL3               0.332   kin of IRRE like 3 isoform 1 
KIRREL                0.328   kin of IRRE like 
KIRREL3               0.320   kin of IRRE like 3 isoform 2 
NPHS1                 0.080   nephrin precursor 
HMCN1                 0.080   hemicentin 1 
LOC100292387          0.071   PREDICTED: similar to hemicentin 2 
HMCN2                 0.071   PREDICTED: hemicentin 2 
HMCN2                 0.069   PREDICTED: hemicentin 2 
ROBO3                 0.065   roundabout, axon guidance receptor, homolog 3 
HMCN2                 0.065   PREDICTED: hemicentin 2 
LOC100289200          0.060   PREDICTED: hypothetical protein XP_002342997 
CADM4                 0.060   cell adhesion molecule 4 
HSPG2                 0.059   heparan sulfate proteoglycan 2 
PTK7                  0.055   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.055   PTK7 protein tyrosine kinase 7 isoform d precursor [...
PTK7                  0.055   PTK7 protein tyrosine kinase 7 isoform b precursor [...
ROBO1                 0.053   roundabout 1 isoform d 
ROBO1                 0.053   roundabout 1 isoform c 
LOC642132             0.053   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.053   PREDICTED: similar to roundabout 1 isoform 2 
ROBO2                 0.053   roundabout, axon guidance receptor, homolog 2 isofo...
PXDN                  0.052   peroxidasin 
SIGLEC1               0.052   sialoadhesin precursor 
ROBO2                 0.051   roundabout, axon guidance receptor, homolog 2 isofor...
IGDCC3                0.049   putative neuronal cell adhesion molecule 
PTK7                  0.049   PTK7 protein tyrosine kinase 7 isoform c precursor [...
MAG                   0.048   myelin associated glycoprotein isoform a precursor [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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