Guide to the Human Genome
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Search of human proteins with 17986275

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|17986275 fast skeletal myosin alkali light chain 1 isoform
3f [Homo sapiens]
         (150 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f...   296   6e-81
gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f...   284   2e-77
gi|17986258 myosin, light chain 6, alkali, smooth muscle and non...   235   1e-62
gi|4557038 atrial/embryonic alkali myosin light chain [Homo sapi...   228   1e-60
gi|50845428 atrial/embryonic alkali myosin light chain [Homo sap...   228   1e-60
gi|4557777 slow skeletal ventricular myosin alkali light chain 3...   226   6e-60
gi|4505303 smooth muscle and non-muscle myosin alkali light chai...   226   7e-60
gi|88999583 myosin, light chain 6, alkali, smooth muscle and non...   225   9e-60
gi|4885111 calmodulin-like 3 [Homo sapiens]                           121   3e-28
gi|58218968 calmodulin 3 [Homo sapiens]                               119   7e-28
gi|4502549 calmodulin 2 [Homo sapiens]                                119   7e-28
gi|5901912 calmodulin 1 [Homo sapiens]                                119   7e-28
gi|4507617 fast skeletal muscle troponin C [Homo sapiens]              85   2e-17
gi|223278387 calmodulin-like 5 [Homo sapiens]                          77   7e-15
gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]                74   5e-14
gi|4757974 centrin 1 [Homo sapiens]                                    74   6e-14
gi|50897266 calmodulin-like 6 [Homo sapiens]                           72   2e-13
gi|4507615 troponin C, slow [Homo sapiens]                             70   5e-13
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]        70   7e-13
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]        70   7e-13
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo...    69   1e-12
gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo...    69   1e-12
gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo...    69   1e-12
gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo ...    69   1e-12
gi|46397403 centrin 3 [Homo sapiens]                                   69   2e-12
gi|4757902 caltractin [Homo sapiens]                                   68   3e-12
gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric [...    67   4e-12
gi|169167243 PREDICTED: similar to myosin regulatory light chain...    65   2e-11
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi...    65   2e-11
gi|88981341 PREDICTED: similar to myosin regulatory light chain ...    65   3e-11

>gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f
           [Homo sapiens]
          Length = 150

 Score =  296 bits (757), Expect = 6e-81
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MSFSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELN 60
           MSFSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELN
Sbjct: 1   MSFSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELN 60

Query: 61  AKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMK 120
           AKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMK
Sbjct: 61  AKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMK 120

Query: 121 EEEVEALMAGQEDSNGCINYEAFVKHIMSI 150
           EEEVEALMAGQEDSNGCINYEAFVKHIMSI
Sbjct: 121 EEEVEALMAGQEDSNGCINYEAFVKHIMSI 150


>gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f
           [Homo sapiens]
          Length = 194

 Score =  284 bits (727), Expect = 2e-77
 Identities = 144/150 (96%), Positives = 146/150 (97%)

Query: 1   MSFSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELN 60
           + FS +Q  EFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELN
Sbjct: 45  IEFSKEQQDEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELN 104

Query: 61  AKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMK 120
           AKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMK
Sbjct: 105 AKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMK 164

Query: 121 EEEVEALMAGQEDSNGCINYEAFVKHIMSI 150
           EEEVEALMAGQEDSNGCINYEAFVKHIMSI
Sbjct: 165 EEEVEALMAGQEDSNGCINYEAFVKHIMSI 194


>gi|17986258 myosin, light chain 6, alkali, smooth muscle and
           non-muscle isoform 1 [Homo sapiens]
          Length = 151

 Score =  235 bits (599), Expect = 1e-62
 Identities = 112/147 (76%), Positives = 127/147 (86%)

Query: 3   FSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAK 62
           F+ DQ AEFKEAF LFDRTGD KI  SQ GDV+RALG NPTNAEV KVLGNP ++E+N K
Sbjct: 4   FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVK 63

Query: 63  KIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEE 122
            ++FE FLPM+Q ++ NKDQ TYED+VEGLRVFDKEGNGTVMGAE+RHVL TLGEKM EE
Sbjct: 64  VLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 123

Query: 123 EVEALMAGQEDSNGCINYEAFVKHIMS 149
           EVE L+AG EDSNGCINYEAFV+HI+S
Sbjct: 124 EVEMLVAGHEDSNGCINYEAFVRHILS 150


>gi|4557038 atrial/embryonic alkali myosin light chain [Homo
           sapiens]
          Length = 197

 Score =  228 bits (582), Expect = 1e-60
 Identities = 115/151 (76%), Positives = 127/151 (84%), Gaps = 2/151 (1%)

Query: 1   MSFSADQIAEFKEAFLLFDRT--GDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEE 58
           + F+ADQI EFKEAF LFDRT  G+ KIT  Q GDVLRALG NPTNAEV +VLG P  EE
Sbjct: 46  IDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEE 105

Query: 59  LNAKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK 118
           +N K ++FE FLP++Q IS NK+Q TYEDFVEGLRVFDKE NGTVMGAELRHVLATLGEK
Sbjct: 106 MNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEK 165

Query: 119 MKEEEVEALMAGQEDSNGCINYEAFVKHIMS 149
           M E EVE L+AGQED+NGCINYEAFVKHIMS
Sbjct: 166 MTEAEVEQLLAGQEDANGCINYEAFVKHIMS 196


>gi|50845428 atrial/embryonic alkali myosin light chain [Homo
           sapiens]
          Length = 197

 Score =  228 bits (582), Expect = 1e-60
 Identities = 115/151 (76%), Positives = 127/151 (84%), Gaps = 2/151 (1%)

Query: 1   MSFSADQIAEFKEAFLLFDRT--GDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEE 58
           + F+ADQI EFKEAF LFDRT  G+ KIT  Q GDVLRALG NPTNAEV +VLG P  EE
Sbjct: 46  IDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEE 105

Query: 59  LNAKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK 118
           +N K ++FE FLP++Q IS NK+Q TYEDFVEGLRVFDKE NGTVMGAELRHVLATLGEK
Sbjct: 106 MNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEK 165

Query: 119 MKEEEVEALMAGQEDSNGCINYEAFVKHIMS 149
           M E EVE L+AGQED+NGCINYEAFVKHIMS
Sbjct: 166 MTEAEVEQLLAGQEDANGCINYEAFVKHIMS 196


>gi|4557777 slow skeletal ventricular myosin alkali light chain 3
           [Homo sapiens]
          Length = 195

 Score =  226 bits (576), Expect = 6e-60
 Identities = 114/151 (75%), Positives = 126/151 (83%), Gaps = 2/151 (1%)

Query: 1   MSFSADQIAEFKEAFLLFDRTG--DSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEE 58
           + F+ +QI EFKEAF+LFDRT   + KIT  Q GDVLRALG NPT AEV +VLG P  EE
Sbjct: 44  IEFTPEQIEEFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEE 103

Query: 59  LNAKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK 118
           LN K ++FE FLPM+Q IS NKD  TYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGE+
Sbjct: 104 LNTKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGER 163

Query: 119 MKEEEVEALMAGQEDSNGCINYEAFVKHIMS 149
           + E+EVE LMAGQEDSNGCINYEAFVKHIMS
Sbjct: 164 LTEDEVEKLMAGQEDSNGCINYEAFVKHIMS 194


>gi|4505303 smooth muscle and non-muscle myosin alkali light chain
           6B [Homo sapiens]
          Length = 208

 Score =  226 bits (575), Expect = 7e-60
 Identities = 105/150 (70%), Positives = 127/150 (84%)

Query: 1   MSFSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELN 60
           + F+ DQ+ EFKEAF LFDR GD KI  SQ GDV+RALG NPTNAEV KVLGNP ++EL 
Sbjct: 59  IEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELK 118

Query: 61  AKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMK 120
           +++++FE FLPM+QA++ N+ Q TYED++EG RVFDKEGNG VMGAELRHVL TLGEKM 
Sbjct: 119 SRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMT 178

Query: 121 EEEVEALMAGQEDSNGCINYEAFVKHIMSI 150
           EEEVE ++AG EDSNGCINYEAF+KHI+S+
Sbjct: 179 EEEVETVLAGHEDSNGCINYEAFLKHILSV 208


>gi|88999583 myosin, light chain 6, alkali, smooth muscle and
           non-muscle isoform 2 [Homo sapiens]
          Length = 151

 Score =  225 bits (574), Expect = 9e-60
 Identities = 107/147 (72%), Positives = 124/147 (84%)

Query: 3   FSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAK 62
           F+ DQ AEFKEAF LFDRTGD KI  SQ GDV+RALG NPTNAEV KVLGNP ++E+N K
Sbjct: 4   FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVK 63

Query: 63  KIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEE 122
            ++FE FLPM+Q ++ NKDQ TYED+VEGLRVFDKEGNGTVMGAE+RHVL TLGEKM EE
Sbjct: 64  VLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 123

Query: 123 EVEALMAGQEDSNGCINYEAFVKHIMS 149
           EVE L+AG EDSNGCINYE  V+ +++
Sbjct: 124 EVEMLVAGHEDSNGCINYEELVRMVLN 150


>gi|4885111 calmodulin-like 3 [Homo sapiens]
          Length = 149

 Score =  121 bits (303), Expect = 3e-28
 Identities = 66/145 (45%), Positives = 91/145 (62%), Gaps = 5/145 (3%)

Query: 6   DQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIE 65
           +Q+ EFKEAF LFD+ GD  IT  ++G V+R+LG NPT AE+R ++     +      ++
Sbjct: 8   EQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRD--GNGTVD 65

Query: 66  FEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEV- 124
           F +FL MM      KD    E+  E  RVFDK+GNG V  AELRHV+  LGEK+ +EEV 
Sbjct: 66  FPEFLGMM--ARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVD 123

Query: 125 EALMAGQEDSNGCINYEAFVKHIMS 149
           E + A   D +G +NYE FV+ ++S
Sbjct: 124 EMIRAADTDGDGQVNYEEFVRVLVS 148


>gi|58218968 calmodulin 3 [Homo sapiens]
          Length = 149

 Score =  119 bits (299), Expect = 7e-28
 Identities = 66/141 (46%), Positives = 94/141 (66%), Gaps = 5/141 (3%)

Query: 6   DQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIE 65
           +QIAEFKEAF LFD+ GD  IT  ++G V+R+LG NPT AE++ ++ N  + + N   I+
Sbjct: 8   EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI-NEVDADGNG-TID 65

Query: 66  FEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVE 125
           F +FL MM      KD  + E+  E  RVFDK+GNG +  AELRHV+  LGEK+ +EEV+
Sbjct: 66  FPEFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123

Query: 126 ALMAGQE-DSNGCINYEAFVK 145
            ++   + D +G +NYE FV+
Sbjct: 124 EMIREADIDGDGQVNYEEFVQ 144


>gi|4502549 calmodulin 2 [Homo sapiens]
          Length = 149

 Score =  119 bits (299), Expect = 7e-28
 Identities = 66/141 (46%), Positives = 94/141 (66%), Gaps = 5/141 (3%)

Query: 6   DQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIE 65
           +QIAEFKEAF LFD+ GD  IT  ++G V+R+LG NPT AE++ ++ N  + + N   I+
Sbjct: 8   EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI-NEVDADGNG-TID 65

Query: 66  FEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVE 125
           F +FL MM      KD  + E+  E  RVFDK+GNG +  AELRHV+  LGEK+ +EEV+
Sbjct: 66  FPEFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123

Query: 126 ALMAGQE-DSNGCINYEAFVK 145
            ++   + D +G +NYE FV+
Sbjct: 124 EMIREADIDGDGQVNYEEFVQ 144


>gi|5901912 calmodulin 1 [Homo sapiens]
          Length = 149

 Score =  119 bits (299), Expect = 7e-28
 Identities = 66/141 (46%), Positives = 94/141 (66%), Gaps = 5/141 (3%)

Query: 6   DQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIE 65
           +QIAEFKEAF LFD+ GD  IT  ++G V+R+LG NPT AE++ ++ N  + + N   I+
Sbjct: 8   EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI-NEVDADGNG-TID 65

Query: 66  FEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVE 125
           F +FL MM      KD  + E+  E  RVFDK+GNG +  AELRHV+  LGEK+ +EEV+
Sbjct: 66  FPEFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123

Query: 126 ALMAGQE-DSNGCINYEAFVK 145
            ++   + D +G +NYE FV+
Sbjct: 124 EMIREADIDGDGQVNYEEFVQ 144


>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
          Length = 160

 Score = 85.1 bits (209), Expect = 2e-17
 Identities = 48/144 (33%), Positives = 84/144 (58%), Gaps = 4/144 (2%)

Query: 4   SADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKK 63
           S + IAEFK AF +FD  G   I++ ++G V+R LG  PT  E+  ++     +E  +  
Sbjct: 13  SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII--EEVDEDGSGT 70

Query: 64  IEFEQFLPMM-QAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEE 122
           I+FE+FL MM + +  +    + E+  E  R+FD+  +G +   EL  +    GE + +E
Sbjct: 71  IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDE 130

Query: 123 EVEALMA-GQEDSNGCINYEAFVK 145
           E+E+LM  G ++++G I+++ F+K
Sbjct: 131 EIESLMKDGDKNNDGRIDFDEFLK 154



 Score = 43.5 bits (101), Expect = 7e-05
 Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 10  EFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQF 69
           E  E F +FDR  D  I   ++ ++ RA G + T+ E+  ++ +   ++ N  +I+F++F
Sbjct: 95  ELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKD--GDKNNDGRIDFDEF 152

Query: 70  LPMMQAI 76
           L MM+ +
Sbjct: 153 LKMMEGV 159


>gi|223278387 calmodulin-like 5 [Homo sapiens]
          Length = 146

 Score = 76.6 bits (187), Expect = 7e-15
 Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 8/141 (5%)

Query: 6   DQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIE 65
           ++ A++K+AF   D  G+  I   ++G  L+A G N + A++RK++    ++     +I 
Sbjct: 8   EEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSD--GDGEIS 65

Query: 66  FEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVE 125
           F++FL   +     K +A  ED     R FD++G+G +   ELR  +A LG+ + +EE++
Sbjct: 66  FQEFLTAAK-----KARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELD 120

Query: 126 ALMAGQE-DSNGCINYEAFVK 145
           A++   + D +G +NYE F +
Sbjct: 121 AMIREADVDQDGRVNYEEFAR 141


>gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]
          Length = 196

 Score = 73.9 bits (180), Expect = 5e-14
 Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 11/148 (7%)

Query: 4   SADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVL---GNPSNEELN 60
           S DQI E+KE F L+D+    KI  + +   +R LG +PT  EV++ L   G   N EL 
Sbjct: 49  SQDQINEYKECFSLYDKQQRGKIKATDLMVAMRCLGASPTPGEVQRHLQTHGIDGNGEL- 107

Query: 61  AKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMK 120
               +F  FL +M      +D    ++ +  + + DKE  G VM ++LR  L +LGEK+ 
Sbjct: 108 ----DFSTFLTIMHMQIKQEDPK--KEILLAMLMVDKEKKGYVMASDLRSKLTSLGEKLT 161

Query: 121 EEEVEALMAGQE-DSNGCINYEAFVKHI 147
            +EV+ L    + + NG + Y+ F+  I
Sbjct: 162 HKEVDDLFREADIEPNGKVKYDEFIHKI 189


>gi|4757974 centrin 1 [Homo sapiens]
          Length = 172

 Score = 73.6 bits (179), Expect = 6e-14
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 6   DQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIE 65
           DQ  E +EAF LFD  G   I   ++   +RALG  P   E++K++     E     KI 
Sbjct: 28  DQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDRE--GTGKIS 85

Query: 66  FEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVE 125
           F  FL +M    + KD  T E+ ++  R+FD +  G +    L+ V   LGE + +EE++
Sbjct: 86  FNDFLAVMTQKMSEKD--TKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQ 143

Query: 126 ALM-AGQEDSNGCINYEAFVK 145
            ++     D +G +N E F++
Sbjct: 144 EMIDEADRDGDGEVNEEEFLR 164


>gi|50897266 calmodulin-like 6 [Homo sapiens]
          Length = 181

 Score = 72.0 bits (175), Expect = 2e-13
 Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 4/142 (2%)

Query: 4   SADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKK 63
           SA+QI E+K  F +FD  G+ ++   ++  ++  LG NPT +E+  +  +   +  N   
Sbjct: 31  SAEQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRD--NKGF 88

Query: 64  IEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEE 123
              + FL +M  + + K Q    +     RVFDKEG G +    L++VL   GE + E E
Sbjct: 89  FNCDGFLALM-GVYHEKAQNQESELRAAFRVFDKEGKGYIDWNTLKYVLMNAGEPLNEVE 147

Query: 124 VEALM-AGQEDSNGCINYEAFV 144
            E +M    +D +  I+YE FV
Sbjct: 148 AEQMMKEADKDGDRTIDYEEFV 169


>gi|4507615 troponin C, slow [Homo sapiens]
          Length = 161

 Score = 70.5 bits (171), Expect = 5e-13
 Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 5/148 (3%)

Query: 6   DQIAEFKEAFLLFDRTG-DSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKI 64
           +Q  EFK AF +F     D  I+  ++G V+R LG NPT  E+++++     +E  +  +
Sbjct: 15  EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEV--DEDGSGTV 72

Query: 65  EFEQFLPMM-QAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEE 123
           +F++FL MM + + ++    + E+  +  R+FDK  +G +   EL+ +L   GE + E++
Sbjct: 73  DFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDD 132

Query: 124 VEALMA-GQEDSNGCINYEAFVKHIMSI 150
           +E LM  G ++++G I+Y+ F++ +  +
Sbjct: 133 IEELMKDGDKNNDGRIDYDEFLEFMKGV 160


>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
          Length = 163

 Score = 70.1 bits (170), Expect = 7e-13
 Identities = 41/144 (28%), Positives = 79/144 (54%), Gaps = 9/144 (6%)

Query: 6   DQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIE 65
           ++I E + AF  FDR  D  I   ++G  +R LG  PT  E+ ++     +++++  K++
Sbjct: 21  EEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEI-----SQQISGGKVD 75

Query: 66  FEQFLPMM--QAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVL-ATLGEKMKEE 122
           FE F+ +M  + ++   D     +  +  R FD  G+G +   ELR  L A LGE++ + 
Sbjct: 76  FEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQR 135

Query: 123 EVEALMAGQE-DSNGCINYEAFVK 145
           EV+ ++   + + +G +++E FV+
Sbjct: 136 EVDEILQDVDLNGDGLVDFEEFVR 159


>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
          Length = 220

 Score = 70.1 bits (170), Expect = 7e-13
 Identities = 41/144 (28%), Positives = 79/144 (54%), Gaps = 9/144 (6%)

Query: 6   DQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIE 65
           ++I E + AF  FDR  D  I   ++G  +R LG  PT  E+ ++     +++++  K++
Sbjct: 78  EEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEI-----SQQISGGKVD 132

Query: 66  FEQFLPMM--QAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVL-ATLGEKMKEE 122
           FE F+ +M  + ++   D     +  +  R FD  G+G +   ELR  L A LGE++ + 
Sbjct: 133 FEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQR 192

Query: 123 EVEALMAGQE-DSNGCINYEAFVK 145
           EV+ ++   + + +G +++E FV+
Sbjct: 193 EVDEILQDVDLNGDGLVDFEEFVR 216


>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
           sapiens]
          Length = 172

 Score = 69.3 bits (168), Expect = 1e-12
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 3   FSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAK 62
           F   QI EFKEAF + D+  D  I    + D+L +LG NPT+A +  ++           
Sbjct: 26  FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG------ 79

Query: 63  KIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLATLGEKMKE 121
            I F  FL M     N  D    ED +      FD+E  GT+    LR +L T+G++  +
Sbjct: 80  PINFTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTD 136

Query: 122 EEVEAL-MAGQEDSNGCINYEAFVK 145
           EEV+ L      D  G  NY  F +
Sbjct: 137 EEVDELYREAPIDKKGNFNYIEFTR 161


>gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo
           sapiens]
          Length = 154

 Score = 69.3 bits (168), Expect = 1e-12
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 3   FSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAK 62
           F   QI EFKEAF + D+  D  I    + D+L +LG NPT+A +  ++           
Sbjct: 8   FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG------ 61

Query: 63  KIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLATLGEKMKE 121
            I F  FL M     N  D    ED +      FD+E  GT+    LR +L T+G++  +
Sbjct: 62  PINFTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTD 118

Query: 122 EEVEAL-MAGQEDSNGCINYEAFVK 145
           EEV+ L      D  G  NY  F +
Sbjct: 119 EEVDELYREAPIDKKGNFNYIEFTR 143


>gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo
           sapiens]
          Length = 172

 Score = 69.3 bits (168), Expect = 1e-12
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 3   FSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAK 62
           F   QI EFKEAF + D+  D  I    + D+L +LG NPT+A +  ++           
Sbjct: 26  FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG------ 79

Query: 63  KIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLATLGEKMKE 121
            I F  FL M     N  D    ED +      FD+E  GT+    LR +L T+G++  +
Sbjct: 80  PINFTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTD 136

Query: 122 EEVEAL-MAGQEDSNGCINYEAFVK 145
           EEV+ L      D  G  NY  F +
Sbjct: 137 EEVDELYREAPIDKKGNFNYIEFTR 161


>gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo
           sapiens]
          Length = 172

 Score = 69.3 bits (168), Expect = 1e-12
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 3   FSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAK 62
           F   QI EFKEAF + D+  D  I    + D+L +LG NPT+A +  ++           
Sbjct: 26  FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG------ 79

Query: 63  KIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLATLGEKMKE 121
            I F  FL M     N  D    ED +      FD+E  GT+    LR +L T+G++  +
Sbjct: 80  PINFTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTD 136

Query: 122 EEVEAL-MAGQEDSNGCINYEAFVK 145
           EEV+ L      D  G  NY  F +
Sbjct: 137 EEVDELYREAPIDKKGNFNYIEFTR 161


>gi|46397403 centrin 3 [Homo sapiens]
          Length = 167

 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 5/142 (3%)

Query: 4   SADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKK 63
           S +Q  E K+AF LFD   D  I   ++   +RALG +   A+V K+L +   E     K
Sbjct: 23  SEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATG--K 80

Query: 64  IEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEE 123
           I FE F  ++      +D   +E+ ++  ++FD + +G +    LR V   LGE M +EE
Sbjct: 81  ITFEDFNEVVTDWILERD--PHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEE 138

Query: 124 VEALMAG-QEDSNGCINYEAFV 144
           + A++    +D +G IN E F+
Sbjct: 139 LRAMIEEFDKDGDGEINQEEFI 160


>gi|4757902 caltractin [Homo sapiens]
          Length = 172

 Score = 68.2 bits (165), Expect = 3e-12
 Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 5/141 (3%)

Query: 6   DQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIE 65
           +Q  E +EAF LFD  G   I + ++   +RALG  P   E++K++     E     K+ 
Sbjct: 28  EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKE--GTGKMN 85

Query: 66  FEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVE 125
           F  FL +M    + KD  T E+ ++  ++FD +  G +    L+ V   LGE + +EE++
Sbjct: 86  FGDFLTVMTQKMSEKD--TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 143

Query: 126 ALM-AGQEDSNGCINYEAFVK 145
            ++     D +G ++ + F++
Sbjct: 144 EMIDEADRDGDGEVSEQEFLR 164


>gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric
           [Homo sapiens]
          Length = 171

 Score = 67.4 bits (163), Expect = 4e-12
 Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 11/145 (7%)

Query: 3   FSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAK 62
           F   QI EFKEAF + D+  D  I    + D+L +LG NPT+  +  ++           
Sbjct: 25  FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEAPG------ 78

Query: 63  KIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLATLGEKMKE 121
            I F  FL M     N  D    ED +      FD+E  GT+    LR +L T+G++  +
Sbjct: 79  PINFTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTD 135

Query: 122 EEVEAL-MAGQEDSNGCINYEAFVK 145
           EEV+ L      D  G  NY  F +
Sbjct: 136 EEVDELYREAPIDKKGNFNYIEFTR 160


>gi|169167243 PREDICTED: similar to myosin regulatory light chain
           MRCL2 [Homo sapiens]
          Length = 377

 Score = 65.1 bits (157), Expect = 2e-11
 Identities = 47/144 (32%), Positives = 66/144 (45%), Gaps = 11/144 (7%)

Query: 2   SFSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNA 61
           +F   QI EFKEAF + D+  D  I+   +  +L +LG NPT+A +  V+          
Sbjct: 230 TFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGKNPTDACLDAVMNEAPG----- 284

Query: 62  KKIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLATLGEKMK 120
             I F   L M     N  D    ED +      FD+E  GT+    LR +L T+G++  
Sbjct: 285 -PINFTMLLAMFGKKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTVGDQFT 340

Query: 121 EEEVEALMA-GQEDSNGCINYEAF 143
           +EEV+ L      D  G  NY  F
Sbjct: 341 DEEVDELYTEASIDKKGNFNYIEF 364


>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
           sapiens]
          Length = 172

 Score = 65.1 bits (157), Expect = 2e-11
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 3   FSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAK 62
           F   QI EFKEAF + D+  D  I    + D+L +LG NPT+  +  ++           
Sbjct: 26  FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLEGMMSEAPG------ 79

Query: 63  KIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLATLGEKMKE 121
            I F  FL M     N  D    ED +      FD+E +G +    LR +L T+G++  +
Sbjct: 80  PINFTMFLTMFGEKLNGTDP---EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTD 136

Query: 122 EEV-EALMAGQEDSNGCINYEAFVK 145
           EEV E       D  G  NY  F +
Sbjct: 137 EEVDEMYREAPIDKKGNFNYVEFTR 161


>gi|88981341 PREDICTED: similar to myosin regulatory light chain
           MRCL2 [Homo sapiens]
          Length = 377

 Score = 64.7 bits (156), Expect = 3e-11
 Identities = 47/144 (32%), Positives = 66/144 (45%), Gaps = 11/144 (7%)

Query: 2   SFSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNA 61
           +F   QI EFKEAF + D+  D  I+   +  +L +LG NPT+A +  V+          
Sbjct: 230 TFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGKNPTDACLDAVMNEAPG----- 284

Query: 62  KKIEFEQFLPMMQAISNNKDQATYEDFV-EGLRVFDKEGNGTVMGAELRHVLATLGEKMK 120
             I F   L M     N  D    ED +      FD+E  GT+    LR +L T+G++  
Sbjct: 285 -PINFTMLLAMFGKKLNGTDP---EDVIRNAFACFDEEATGTIQEDYLRELLTTVGDQFT 340

Query: 121 EEEVEALMA-GQEDSNGCINYEAF 143
           +EEV+ L      D  G  NY  F
Sbjct: 341 DEEVDELYTEAPIDKKGNFNYIEF 364


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,929,413
Number of Sequences: 37866
Number of extensions: 191421
Number of successful extensions: 686
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 501
Number of HSP's gapped (non-prelim): 135
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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