Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MYL12B Sequence: fasta or formatted (154aa) NCBI GI: 222144328
Description:

myosin regulatory light chain MRCL2 isoform B

Referenced in:

Myosin

Other entries for this name:
alt prot [172aa] myosin regulatory light chain MRCL2 isoform A
alt prot [172aa] myosin regulatory light chain MRCL2 isoform A
alt prot [172aa] myosin regulatory light chain MRCL2 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         11           1
 C cysteine            0.6          1           1
 D aspartate          12.3         19           2
 E glutamate           9.7         15           2
 F phenylalanine       8.4         13           1
 G glycine             5.8          9           1
 H histidine           1.3          2           1
 I isoleucine          5.8          9           1
 K lysine              5.8          9           2
 L leucine             7.1         11           2
 M methionine          6.5         10           2
 N asparagine          5.8          9           1
 P proline             3.2          5           1
 Q glutamine           3.2          5           1
 R arginine            3.9          6           1
 S serine              2.6          4           2
 T threonine           6.5         10           2
 V valine              1.3          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin regulatory light chain MRCL2 isoform B [Homo... 
MYL12B                0.983   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.983   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.983   myosin regulatory light chain MRCL2 isoform A 
MYL12A                0.976   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL9                  0.928   myosin regulatory light chain 9 isoform a 
LOC391722             0.887   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.887   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.877   PREDICTED: similar to myosin regulatory light chain...
MYL2                  0.524   slow cardiac myosin regulatory light chain 2 
MYLPF                 0.517   myosin light chain, phosphorylatable, fast skeletal ...
MYL5                  0.490   myosin regulatory light chain 5 
MYL10                 0.449   myosin, light chain 10, regulatory 
MYL7                  0.449   myosin light chain 2a 
MYL9                  0.384   myosin regulatory light chain 9 isoform b 
CALM3                 0.342   calmodulin 3 
CALM2                 0.342   calmodulin 2 
CALM1                 0.342   calmodulin 1 
CALML3                0.308   calmodulin-like 3 
CETN1                 0.202   centrin 1 
CETN2                 0.202   caltractin 
CALML4                0.202   calmodulin-like 4 isoform 1 
CALML5                0.182   calmodulin-like 5 
TNNC2                 0.168   fast skeletal muscle troponin C 
MYL6B                 0.161   smooth muscle and non-muscle myosin alkali light chai...
MYL6                  0.158   myosin, light chain 6, alkali, smooth muscle and non...
MYL1                  0.151   fast skeletal myosin alkali light chain 1 isoform 3f...
MYL6                  0.151   myosin, light chain 6, alkali, smooth muscle and non...
MYL1                  0.151   fast skeletal myosin alkali light chain 1 isoform 1f...
TNNC1                 0.144   troponin C, slow 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press