Guide to the Human Genome
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Name: ZNF682 Sequence: fasta or formatted (498aa) NCBI GI: 15150801
Description:

zinc finger protein 682 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [466aa] zinc finger protein 682 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6         13           1
 C cysteine            7.2         36           1
 D aspartate           1.6          8           1
 E glutamate          10.0         50           2
 F phenylalanine       4.4         22           1
 G glycine             5.4         27           1
 H histidine           6.6         33           1
 I isoleucine          4.2         21           2
 K lysine             13.7         68           2
 L leucine             7.0         35           2
 M methionine          1.0          5           1
 N asparagine          4.2         21           1
 P proline             3.4         17           2
 Q glutamine           2.2         11           2
 R arginine            5.2         26           2
 S serine              6.8         34           3
 T threonine           6.2         31           2
 V valine              3.0         15           1
 W tryptophan          1.2          6           1
 Y tyrosine            3.8         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 682 isoform 1 
ZNF682                0.940   zinc finger protein 682 isoform 2 
ZNF431                0.622   zinc finger protein 431 
ZNF430                0.614   zinc finger protein 430 
ZNF85                 0.607   zinc finger protein 85 
ZNF92                 0.606   zinc finger protein 92 isoform 2 
LOC646864             0.603   PREDICTED: similar to hCG36734 
LOC646864             0.603   PREDICTED: similar to hCG36734 
LOC646864             0.603   PREDICTED: similar to hCG36734 
ZNF98                 0.602   zinc finger protein 98 
ZNF66                 0.601   PREDICTED: zinc finger protein 66 
ZNF66                 0.601   PREDICTED: zinc finger protein 66 
ZNF66                 0.601   PREDICTED: zinc finger protein 66 
ZNF737                0.600   zinc finger protein 737 
ZNF737                0.600   PREDICTED: zinc finger protein 737 
ZNF737                0.600   PREDICTED: zinc finger protein 737 
ZNF737                0.600   PREDICTED: zinc finger protein 737 
ZNF100                0.598   zinc finger protein 100 
LOC730110             0.596   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.596   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.595   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF730                0.595   PREDICTED: zinc finger protein 730 
ZNF730                0.595   PREDICTED: zinc finger protein 730 
ZNF595                0.595   zinc finger protein 595 
ZNF91                 0.594   zinc finger protein 91 
ZNF93                 0.594   zinc finger protein 93 
ZNF730                0.593   PREDICTED: zinc finger protein 730 
ZNF257                0.593   zinc finger protein 257 
ZNF254                0.590   zinc finger protein 254 
ZNF43                 0.589   zinc finger protein 43 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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