AIRE 29855

Name: AIRE	Sequence: fasta or formatted (545aa)		NCBI GI: 4557291
Description: autoimmune regulator isoform 1		Referenced in: PHD Finger Proteins
Other entries for this name: alt prot [348aa] autoimmune regulator isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.7 64 3 C cysteine 3.3 18 2 D aspartate 5.0 27 2 E glutamate 5.9 32 2 F phenylalanine 2.6 14 1 G glycine 8.8 48 3 H histidine 2.8 15 1 I isoleucine 2.0 11 1 K lysine 4.4 24 2 L leucine 10.3 56 2 M methionine 0.9 5 1 N asparagine 0.9 5 1 P proline 11.7 64 3 Q glutamine 4.8 26 2 R arginine 6.6 36 2 S serine 7.5 41 3 T threonine 4.0 22 2 V valine 5.1 28 2 W tryptophan 0.9 5 1 Y tyrosine 0.7 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 autoimmune regulator isoform 1 AIRE 0.479 autoimmune regulator isoform 2 CHD5 0.056 chromodomain helicase DNA binding protein 5 CHD4 0.051 chromodomain helicase DNA binding protein 4 SP140L 0.049 SP140 nuclear body protein-like CHD3 0.049 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.049 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.049 chromodomain helicase DNA binding protein 3 isoform... TRIM24 0.047 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.047 transcriptional intermediary factor 1 alpha isoform ... SP110 0.046 SP110 nuclear body protein isoform a SP110 0.046 SP110 nuclear body protein isoform c TRIM66 0.046 tripartite motif-containing 66 SP140 0.045 SP140 nuclear body protein isoform 1 TRIM33 0.042 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.042 tripartite motif-containing 33 protein isoform alpha... PHF21A 0.040 BRAF35/HDAC2 complex isoform a SP100 0.040 nuclear antigen Sp100 isoform 1 PHF12 0.039 PHD finger protein 12 isoform 1 PHF12 0.039 PHD finger protein 12 isoform 2 PHF21A 0.037 BRAF35/HDAC2 complex isoform b PHF14 0.036 PHD finger protein 14 isoform 1 BPTF 0.035 bromodomain PHD finger transcription factor isoform ... BPTF 0.035 bromodomain PHD finger transcription factor isoform ... BAZ1B 0.033 bromodomain adjacent to zinc finger domain, 1B [Homo... PHF21B 0.032 PHD finger protein 21B isoform 2 PHF21B 0.032 PHD finger protein 21B isoform 1 KDM5C 0.030 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.030 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.030 jumonji, AT rich interactive domain 1D isoform 3 [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.