SIVA1 999

Name: SIVA1	Sequence: fasta or formatted (175aa)		NCBI GI: 11277468
Description: CD27-binding (Siva) protein isoform 1		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [110aa] CD27-binding (Siva) protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.3 18 2 C cysteine 9.1 16 1 D aspartate 4.6 8 1 E glutamate 5.7 10 1 F phenylalanine 2.3 4 1 G glycine 9.1 16 1 H histidine 1.1 2 1 I isoleucine 1.7 3 1 K lysine 4.0 7 1 L leucine 8.6 15 2 M methionine 2.3 4 1 N asparagine 0.0 0 0 P proline 5.7 10 1 Q glutamine 4.6 8 1 R arginine 7.4 13 1 S serine 8.0 14 2 T threonine 3.4 6 1 V valine 9.1 16 2 W tryptophan 1.1 2 1 Y tyrosine 1.7 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD27-binding (Siva) protein isoform 1 SIVA1 0.420 CD27-binding (Siva) protein isoform 2 KRTAP5-7 0.041 keratin associated protein 5-7 KRTAP5-6 0.041 keratin associated protein 5-6 KRTAP5-3 0.035 keratin associated protein 5-3 KRTAP5-1 0.035 keratin associated protein 5-1 KRTAP5-2 0.032 keratin associated protein 5-2 KRTAP5-10 0.029 keratin associated protein 5-10 RNF166 0.029 ring finger protein 166 KRTAP5-8 0.029 keratin associated protein 5-8 KRTAP5-9 0.026 keratin associated protein 5-9 MT1E 0.023 metallothionein 1E BARD1 0.023 BRCA1 associated RING domain 1 KRTAP5-5 0.023 keratin associated protein 5-5 TRIM71 0.023 tripartite motif-containing 71 RNF17 0.023 ring finger protein 17 KRTAP5-4 0.023 keratin associated protein 5-4 PWWP2B 0.020 PWWP domain containing 2 isoform 1 PWWP2B 0.020 PWWP domain containing 2 isoform 2 MT1A 0.020 metallothionein 1A MT1G 0.020 metallothionein 1G KRTAP5-11 0.017 keratin associated protein 5-11 MT1H 0.017 metallothionein 1H LOC100292845 0.015 PREDICTED: hypothetical protein LOC100289230 0.015 PREDICTED: hypothetical protein XP_002342600 TNFRSF18 0.015 tumor necrosis factor receptor superfamily, member 18... TNFRSF18 0.015 tumor necrosis factor receptor superfamily, member 1... TNFRSF18 0.015 tumor necrosis factor receptor superfamily, member 1... MT1X 0.015 metallothionein 1X FOXD1 0.015 forkhead box D1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.