SIVA1 1000

Name: SIVA1	Sequence: fasta or formatted (110aa)		NCBI GI: 11277470
Description: CD27-binding (Siva) protein isoform 2		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [175aa] CD27-binding (Siva) protein isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 10 1 C cysteine 13.6 15 1 D aspartate 4.5 5 1 E glutamate 5.5 6 1 F phenylalanine 2.7 3 1 G glycine 7.3 8 1 H histidine 0.0 0 0 I isoleucine 0.9 1 1 K lysine 3.6 4 1 L leucine 6.4 7 1 M methionine 2.7 3 1 N asparagine 0.0 0 0 P proline 3.6 4 1 Q glutamine 4.5 5 1 R arginine 7.3 8 1 S serine 10.0 11 2 T threonine 3.6 4 1 V valine 11.8 13 1 W tryptophan 0.9 1 1 Y tyrosine 1.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD27-binding (Siva) protein isoform 2 SIVA1 0.682 CD27-binding (Siva) protein isoform 1 KRTAP5-7 0.066 keratin associated protein 5-7 KRTAP5-6 0.066 keratin associated protein 5-6 KRTAP5-3 0.057 keratin associated protein 5-3 KRTAP5-1 0.057 keratin associated protein 5-1 KRTAP5-2 0.052 keratin associated protein 5-2 KRTAP5-10 0.047 keratin associated protein 5-10 RNF166 0.047 ring finger protein 166 KRTAP5-8 0.047 keratin associated protein 5-8 KRTAP5-9 0.043 keratin associated protein 5-9 MT1E 0.038 metallothionein 1E BARD1 0.038 BRCA1 associated RING domain 1 KRTAP5-5 0.038 keratin associated protein 5-5 KRTAP5-4 0.038 keratin associated protein 5-4 MT1A 0.033 metallothionein 1A MT1G 0.033 metallothionein 1G TRIM24 0.033 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.033 transcriptional intermediary factor 1 alpha isoform ... MT1H 0.028 metallothionein 1H COG7 0.024 component of oligomeric golgi complex 7 MT1X 0.024 metallothionein 1X MT1B 0.024 metallothionein 1B MT1F 0.024 metallothionein 1F KRTAP5-11 0.024 keratin associated protein 5-11 SMYD1 0.024 SET and MYND domain containing 1 ZNF330 0.024 zinc finger protein 330 RNF17 0.024 ring finger protein 17 ZNF778 0.024 zinc finger protein 778 MT2A 0.019 metallothionein 2A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.