Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SIPA1L2 Sequence: fasta or formatted (1722aa) NCBI GI: 112421013
Description:

signal-induced proliferation-associated 1 like 2

Referenced in:

Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1        105           3
 C cysteine            2.1         36           1
 D aspartate           5.9        101           2
 E glutamate           6.9        118           3
 F phenylalanine       3.9         68           2
 G glycine             7.3        126           4
 H histidine           3.0         51           2
 I isoleucine          4.1         70           2
 K lysine              5.5         95           3
 L leucine             8.2        141           3
 M methionine          1.9         32           1
 N asparagine          3.5         60           2
 P proline             5.7         99           3
 Q glutamine           4.4         75           2
 R arginine            6.2        106           2
 S serine             11.1        191           4
 T threonine           5.6         96           2
 V valine              5.6         96           2
 W tryptophan          0.8         14           1
 Y tyrosine            2.4         42           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal-induced proliferation-associated 1 like 2 [H... 
SIPA1L1               0.447   signal-induced proliferation-associated 1 like 1 [Hom...
SIPA1L3               0.378   signal-induced proliferation-associated 1 like 3 [Ho...
SIPA1                 0.171   signal-induced proliferation-associated protein 1 [...
SIPA1                 0.171   signal-induced proliferation-associated protein 1 [...
GARNL4                0.059   GTPase activating Rap/RanGAP domain-like 4 isoform ...
GARNL4                0.059   GTPase activating Rap/RanGAP domain-like 4 isoform ...
RAP1GAP               0.057   RAP1 GTPase activating protein isoform c 
RAP1GAP               0.057   RAP1 GTPase activating protein isoform a 
RAP1GAP               0.057   RAP1 GTPase activating protein isoform b 
GARNL3                0.056   GTPase activating Rap/RanGAP domain-like 3 
GARNL1                0.014   GTPase activating Rap/RanGAP domain-like 1 isoform 2...
GARNL1                0.014   GTPase activating Rap/RanGAP domain-like 1 isoform 1...
C20orf74              0.013   akt substrate AS250 
TSC2                  0.012   tuberous sclerosis 2 isoform 4 
TSC2                  0.012   tuberous sclerosis 2 isoform 1 
TSC2                  0.012   tuberous sclerosis 2 isoform 5 
SHANK3                0.007   SH3 and multiple ankyrin repeat domains 3 
DSPP                  0.007   dentin sialophosphoprotein preproprotein 
SHANK1                0.006   SH3 and multiple ankyrin repeat domains 1 
COL17A1               0.005   alpha 1 type XVII collagen 
MAST4                 0.005   microtubule associated serine/threonine kinase fami...
SNX27                 0.005   sorting nexin family member 27 
LOC100133915          0.005   PREDICTED: hypothetical protein 
HRNR                  0.005   hornerin 
ARHGAP23              0.005   Rho GTPase activating protein 23 
SRRM2                 0.004   splicing coactivator subunit SRm300 
SLC9A3R1              0.004   sodium/hydrogen exchanger regulatory factor 1 
CDKN2AIP              0.004   CDKN2A interacting protein 
SCRIB                 0.004   scribble isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press