Guide to the Human Genome
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Name: SIPA1 Sequence: fasta or formatted (1042aa) NCBI GI: 206725523
Description:

signal-induced proliferation-associated protein 1

Referenced in:

Ras

Other entries for this name:
alt mRNA [1042aa] signal-induced proliferation-associated protein 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3        107           3
 C cysteine            1.2         13           1
 D aspartate           4.1         43           2
 E glutamate           7.3         76           3
 F phenylalanine       3.4         35           2
 G glycine             8.6         90           3
 H histidine           2.5         26           1
 I isoleucine          1.7         18           1
 K lysine              2.2         23           1
 L leucine            11.5        120           3
 M methionine          1.2         12           1
 N asparagine          1.9         20           2
 P proline             9.1         95           2
 Q glutamine           4.6         48           3
 R arginine            8.1         84           3
 S serine              8.6         90           2
 T threonine           6.3         66           3
 V valine              5.1         53           2
 W tryptophan          0.6          6           1
 Y tyrosine            1.6         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal-induced proliferation-associated protein 1 [... 
SIPA1                 1.000   signal-induced proliferation-associated protein 1 [...
SIPA1L1               0.298   signal-induced proliferation-associated 1 like 1 [Hom...
SIPA1L2               0.288   signal-induced proliferation-associated 1 like 2 [H...
SIPA1L3               0.286   signal-induced proliferation-associated 1 like 3 [Ho...
GARNL4                0.096   GTPase activating Rap/RanGAP domain-like 4 isoform ...
GARNL4                0.096   GTPase activating Rap/RanGAP domain-like 4 isoform ...
GARNL3                0.095   GTPase activating Rap/RanGAP domain-like 3 
RAP1GAP               0.090   RAP1 GTPase activating protein isoform c 
RAP1GAP               0.090   RAP1 GTPase activating protein isoform a 
RAP1GAP               0.090   RAP1 GTPase activating protein isoform b 
GARNL1                0.020   GTPase activating Rap/RanGAP domain-like 1 isoform 2...
GARNL1                0.020   GTPase activating Rap/RanGAP domain-like 1 isoform 1...
TSC2                  0.019   tuberous sclerosis 2 isoform 4 
TSC2                  0.019   tuberous sclerosis 2 isoform 1 
TSC2                  0.019   tuberous sclerosis 2 isoform 5 
C20orf74              0.019   akt substrate AS250 
ZFC3H1                0.008   proline/serine-rich coiled-coil 2 
ZNF541                0.007   zinc finger protein 541 
NHSL1                 0.007   NHS-like 1 
MAP7                  0.007   microtubule-associated protein 7 
MLLT1                 0.007   myeloid/lymphoid or mixed-lineage leukemia (trithora...
NACAD                 0.007   PREDICTED: NAC alpha domain containing 
MAST2                 0.007   microtubule associated serine/threonine kinase 2 [H...
GRID2IP               0.007   glutamate receptor, ionotropic, delta 2 (Grid2) int...
ROCK1                 0.007   Rho-associated, coiled-coil containing protein kinase...
TAF6                  0.007   TBP-associated factor 6 isoform delta 
TAF6                  0.007   TBP-associated factor 6 isoform alpha 
TAF6                  0.007   TBP-associated factor 6 isoform alpha 
SRRM2                 0.007   splicing coactivator subunit SRm300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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