Guide to the Human Genome
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Name: RAP1GAP Sequence: fasta or formatted (727aa) NCBI GI: 224809578
Description:

RAP1 GTPase activating protein isoform a

Referenced in:

Ras

Other entries for this name:
alt prot [681aa] RAP1 GTPase activating protein isoform b
alt prot [663aa] RAP1 GTPase activating protein isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         38           2
 C cysteine            1.2          9           1
 D aspartate           4.8         35           2
 E glutamate           8.1         59           3
 F phenylalanine       5.6         41           2
 G glycine             7.8         57           4
 H histidine           2.8         20           1
 I isoleucine          3.9         28           1
 K lysine              5.9         43           2
 L leucine             7.4         54           3
 M methionine          1.9         14           2
 N asparagine          3.4         25           2
 P proline             7.2         52           3
 Q glutamine           4.3         31           2
 R arginine            5.0         36           2
 S serine             10.2         74           4
 T threonine           5.6         41           2
 V valine              6.2         45           3
 W tryptophan          0.4          3           1
 Y tyrosine            3.0         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAP1 GTPase activating protein isoform a 
RAP1GAP               0.910   RAP1 GTPase activating protein isoform c 
RAP1GAP               0.882   RAP1 GTPase activating protein isoform b 
GARNL4                0.443   GTPase activating Rap/RanGAP domain-like 4 isoform ...
GARNL4                0.429   GTPase activating Rap/RanGAP domain-like 4 isoform ...
SIPA1L3               0.137   signal-induced proliferation-associated 1 like 3 [Ho...
SIPA1L1               0.136   signal-induced proliferation-associated 1 like 1 [Hom...
SIPA1L2               0.135   signal-induced proliferation-associated 1 like 2 [H...
GARNL3                0.128   GTPase activating Rap/RanGAP domain-like 3 
SIPA1                 0.128   signal-induced proliferation-associated protein 1 [...
SIPA1                 0.128   signal-induced proliferation-associated protein 1 [...
C20orf74              0.039   akt substrate AS250 
GARNL1                0.036   GTPase activating Rap/RanGAP domain-like 1 isoform 2...
GARNL1                0.036   GTPase activating Rap/RanGAP domain-like 1 isoform 1...
TSC2                  0.033   tuberous sclerosis 2 isoform 4 
TSC2                  0.033   tuberous sclerosis 2 isoform 1 
TSC2                  0.033   tuberous sclerosis 2 isoform 5 
ZC3H18                0.013   zinc finger CCCH-type containing 18 
LOC643446             0.012   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.012   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.012   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.012   PREDICTED: similar to ribonucleic acid binding prote...
LOC643446             0.012   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.012   PREDICTED: similar to ribonucleic acid binding prot...
RNPS1                 0.012   RNA-binding protein S1, serine-rich domain 
RNPS1                 0.012   RNA-binding protein S1, serine-rich domain 
ASXL1                 0.010   additional sex combs like 1 
TNRC18                0.010   trinucleotide repeat containing 18 
CYLC1                 0.010   cylicin, basic protein of sperm head cytoskeleton 1...
CACNA1G               0.010   voltage-dependent calcium channel alpha 1G subunit i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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