Guide to the Human Genome
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Name: SIPA1L3 Sequence: fasta or formatted (1781aa) NCBI GI: 71143119
Description:

signal-induced proliferation-associated 1 like 3

Referenced in:

Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9        141           3
 C cysteine            1.3         23           1
 D aspartate           5.3         94           2
 E glutamate           6.1        109           3
 F phenylalanine       3.1         56           2
 G glycine             7.5        134           5
 H histidine           3.0         53           2
 I isoleucine          3.0         53           2
 K lysine              5.2         93           3
 L leucine             8.0        143           3
 M methionine          1.5         27           1
 N asparagine          2.8         50           2
 P proline             8.9        159           3
 Q glutamine           4.5         80           2
 R arginine            6.9        122           3
 S serine             10.6        188           3
 T threonine           6.4        114           3
 V valine              4.7         84           2
 W tryptophan          0.9         16           1
 Y tyrosine            2.4         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal-induced proliferation-associated 1 like 3 [Ho... 
SIPA1L1               0.385   signal-induced proliferation-associated 1 like 1 [Hom...
SIPA1L2               0.363   signal-induced proliferation-associated 1 like 2 [H...
SIPA1                 0.164   signal-induced proliferation-associated protein 1 [...
SIPA1                 0.164   signal-induced proliferation-associated protein 1 [...
GARNL4                0.058   GTPase activating Rap/RanGAP domain-like 4 isoform ...
GARNL4                0.058   GTPase activating Rap/RanGAP domain-like 4 isoform ...
RAP1GAP               0.055   RAP1 GTPase activating protein isoform c 
RAP1GAP               0.055   RAP1 GTPase activating protein isoform a 
RAP1GAP               0.055   RAP1 GTPase activating protein isoform b 
GARNL3                0.054   GTPase activating Rap/RanGAP domain-like 3 
C20orf74              0.014   akt substrate AS250 
GARNL1                0.013   GTPase activating Rap/RanGAP domain-like 1 isoform 2...
GARNL1                0.013   GTPase activating Rap/RanGAP domain-like 1 isoform 1...
SRRM2                 0.011   splicing coactivator subunit SRm300 
TSC2                  0.011   tuberous sclerosis 2 isoform 4 
TSC2                  0.011   tuberous sclerosis 2 isoform 1 
TSC2                  0.011   tuberous sclerosis 2 isoform 5 
SRRM1                 0.010   serine/arginine repetitive matrix 1 
MAGEC1                0.008   melanoma antigen family C, 1 
SHANK3                0.008   SH3 and multiple ankyrin repeat domains 3 
ATN1                  0.008   atrophin-1 
ATN1                  0.008   atrophin-1 
ARID1A                0.008   AT rich interactive domain 1A isoform a 
ARID1A                0.008   AT rich interactive domain 1A isoform b 
MUC12                 0.007   PREDICTED: mucin 12 
NACA                  0.007   nascent polypeptide-associated complex alpha subuni...
AFF4                  0.007   ALL1 fused gene from 5q31 
MUC12                 0.006   PREDICTED: mucin 12 
FLJ37078              0.006   hypothetical protein LOC222183 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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